4.0:Information of module
Light
In comparison with Pst-DC3000(hrpA)-4hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 3.711e-54
GO:0010243 response to organonitrogen compound BP 2.758e-53
GO:1901698 response to nitrogen compound BP 1.199e-40
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 9.520e-06
GO:0019684 photosynthesis, light reaction BP 1.939e-05
GO:0009069 serine family amino acid metabolic proce... BP 1.621e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Light		 Log2 signal ratio
Pst-DC3000(hrpA)-4hpi
1 255807_at AT4G10270 [Wound-responsive family protein] 1.215 -0.041
2 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 1.063 -0.084
3 253259_at AT4G34410 RRTF1, redox responsive transcription factor 1 1.047 -0.063
4 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 1.033 0.049
5 253298_at AT4G33560 [Wound-responsive family protein] 0.995 0.077
6 258606_at AT3G02840 [ARM repeat superfamily protein] 0.956 -0.047
7 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.936 0.030
8 253832_at AT4G27654 unknown 0.926 -0.137
9 255937_at AT1G12610 DDF1, DWARF AND DELAYED FLOWERING 1 0.894 0.040
10 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.888 -0.109
11 245226_at AT3G29970 [B12D protein] 0.878 0.078
12 247024_at AT5G66985 unknown 0.876 0.041
13 252045_at AT3G52450 AtPUB22, PUB22, plant U-box 22 0.864 0.044
14 249197_at AT5G42380 CML37, calmodulin like 37 0.850 -0.018
15 261567_at AT1G33055 unknown 0.837 0.025
16 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 0.815 0.113
17 248400_at AT5G52020 [Integrase-type DNA-binding superfamily protein] 0.802 0.010
18 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.776 -0.108
19 253859_at AT4G27657 unknown 0.761 -0.021
20 248392_at AT5G52050 [MATE efflux family protein] 0.759 0.003
21 251336_at AT3G61190 BAP1, BON association protein 1 0.700 -0.010
22 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 0.665 0.069
23 257654_at AT3G13310 DJC66, DNA J protein C66 0.657 -0.009
24 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 0.656 -0.035
25 259729_at AT1G77640 [Integrase-type DNA-binding superfamily protein] 0.639 -0.058
26 259879_at AT1G76650 CML38, calmodulin-like 38 0.639 -0.075
27 249618_at AT5G37490 [ARM repeat superfamily protein] 0.636 -0.019
28 256522_at AT1G66160 ATCMPG1, CMPG1, CYS, MET, PRO, and GLY protein 1 0.614 -0.022
29 266800_at AT2G22880 [VQ motif-containing protein] 0.613 -0.009
30 260581_at AT2G47190 ATMYB2, MYB DOMAIN PROTEIN 2, MYB2, myb domain protein 2 0.603 -0.017
31 264314_at AT1G70420 unknown 0.576 -0.033
32 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.572 -0.001
33 254200_at AT4G24110 unknown 0.570 0.030
34 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.553 0.046
35 254231_at AT4G23810 ATWRKY53, WRKY53 0.546 0.060
36 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 0.541 -0.030
37 247696_at AT5G59780 ATMYB59, MYB DOMAIN PROTEIN 59, ATMYB59-1, ATMYB59-2, ATMYB59-3, MYB59, myb domain protein 59 -0.446 0.056
38 251342_at AT3G60690 SAUR59, SMALL AUXIN UPREGULATED RNA 59 -0.285 -0.076
39 251084_at AT5G01520 AIRP2, ABA Insensitive RING Protein 2, AtAIRP2 -0.271 -0.030
40 259103_at AT3G11690 unknown -0.242 0.037
41 264211_at AT1G22770 FB, GI, GIGANTEA -0.223 -0.007
42 247323_at AT5G64170 LNK1, night light-inducible and clock-regulated 1 -0.221 -0.021
43 250665_at AT5G06980 LNK4, night light-inducible and clock-regulated 4 -0.209 -0.007
44 255381_at AT4G03510 ATRMA1, RMA1, RING membrane-anchor 1 -0.204 -0.005
45 262590_at AT1G15100 RHA2A, RING-H2 finger A2A -0.203 -0.004
46 265023_at AT1G24440 [RING/U-box superfamily protein] -0.201 -0.001
47 252250_at AT3G49790 [Carbohydrate-binding protein] -0.180 0.035
48 264779_at AT1G08570 ACHT4, atypical CYS HIS rich thioredoxin 4 -0.179 -0.026
49 260969_at AT1G12240 ATBETAFRUCT4, AtFRUCT4, AtVI2, FRUCT4, fructosidase 4, VAC-INV, VACUOLAR INVERTASE, VI2, vacuolar invertase 2 -0.176 -0.019
50 250408_at AT5G10930 CIPK5, CBL-interacting protein kinase 5, SnRK3.24, SNF1-RELATED PROTEIN KINASE 3.24 -0.172 -0.005
51 245431_at AT4G17080 [Histone H3 K4-specific methyltransferase SET7/9 family protein] -0.171 -0.006
52 247049_at AT5G66440 unknown -0.160 -0.028
53 250011_at AT5G18475 [Pentatricopeptide repeat (PPR) superfamily protein] -0.155 -0.054
54 261056_at AT1G01360 PYL9, PYRABACTIN RESISTANCE 1-LIKE 9, RCAR1, regulatory component of ABA receptor 1 -0.154 -0.089
55 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] -0.153 0.014
56 259376_at AT3G16320 Tetratricopeptide repeat (TPR)-like superfamily protein -0.153 0.004
57 263325_at AT2G04240 XERICO -0.153 0.012
58 265028_at AT1G24530 [Transducin/WD40 repeat-like superfamily protein] -0.150 0.051
59 254631_at AT4G18610 LSH9, LIGHT SENSITIVE HYPOCOTYLS 9 -0.146 0.132
60 245078_at AT2G23340 DEAR3, DREB and EAR motif protein 3 -0.145 -0.048
61 256345_at AT1G55030 [RNI-like superfamily protein] -0.144 -0.051
62 247142_at AT5G65570 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.139 -0.010
63 246239_at AT4G36790 [Major facilitator superfamily protein] -0.139 -0.054
64 260567_at AT2G43820 ATSAGT1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, GT, SAGT1, salicylic acid glucosyltransferase 1, SGT1, UDP-glucose:salicylic acid glucosyltransferase 1, UGT74F2, UDP-glucosyltransferase 74F2 -0.135 -0.010
65 252464_at AT3G47160 [RING/U-box superfamily protein] -0.133 0.011
66 264973_at AT1G27040 AtNPF4.5, NPF4.5, NRT1/ PTR family 4.5 -0.126 -0.060
67 259750_at AT1G71130 AtERF070, CRF8, cytokinin response factor 8, ERF070, ethylene response factor 70 -0.125 0.006
68 267477_at AT2G02710 PLP, PAS/LOV PROTEIN, PLPA, PAS/LOV PROTEIN A, PLPB, PAS/LOV protein B, PLPC, PAS/LOV PROTEIN C -0.123 -0.017
69 250054_at AT5G17860 CAX7, calcium exchanger 7 -0.111 -0.056
70 246632_at AT1G29710 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.107 -0.009
71 266529_at AT2G16880 [Pentatricopeptide repeat (PPR) superfamily protein] -0.106 -0.034