4.0:Information of module
Starch sheath 2 days MS incubation
In comparison with Ambient CO2 fully expanded leaf help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 4.154e-31
GO:0006412 translation BP 1.067e-27
GO:0043414 macromolecule methylation BP 9.596e-26
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901576 organic substance biosynthetic process BP 3.810e-04
GO:0009058 biosynthetic process BP 4.038e-04
GO:0006351 transcription, DNA-templated BP 4.699e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Starch sheath 2 days MS incubation		 Log2 signal ratio
Ambient CO2 fully expanded leaf
1 254832_at AT4G12490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 1.304 0.141
2 256787_at AT3G13790 ATBFRUCT1, ATCWINV1, ARABIDOPSIS THALIANA CELL WALL INVERTASE 1 1.221 0.996
3 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 1.126 -0.094
4 254818_at AT4G12470 AZI1, azelaic acid induced 1 1.086 -0.676
5 256825_at AT3G22120 CWLP, cell wall-plasma membrane linker protein 1.065 0.734
6 251899_at AT3G54400 [Eukaryotic aspartyl protease family protein] 0.978 0.062
7 260556_at AT2G43620 [Chitinase family protein] 0.964 0.399
8 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 0.936 -0.345
9 256890_at AT3G23830 AtGRP4, GR-RBP4, GRP4, glycine-rich RNA-binding protein 4 0.931 -0.135
10 263380_at AT2G40200 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.914 -0.041
11 250646_at AT5G06720 ATPA2, peroxidase 2, AtPRX53, PA2, peroxidase 2, PRX53, peroxidase 53 0.900 -0.253
12 254649_at AT4G18570 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.877 0.599
13 266168_at AT2G38870 [Serine protease inhibitor, potato inhibitor I-type family protein] 0.876 0.087
14 262880_at AT1G64880 [Ribosomal protein S5 family protein] 0.860 0.338
15 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 0.860 -1.138
16 245145_at AT2G45440 DHDPS2, dihydrodipicolinate synthase 2 0.853 0.783
17 256983_at AT3G13470 Cpn60beta2, chaperonin-60beta2 0.852 0.400
18 247607_at AT5G60960 PNM1, PPR protein localized to the nucleus and mitochondria 1 0.845 -0.144
19 261460_at AT1G07880 ATMPK13 0.841 0.197
20 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] 0.841 -0.437
21 247440_at AT5G62680 AtNPF2.11, GTR2, GLUCOSINOLATE TRANSPORTER-2, NPF2.11, NRT1/ PTR family 2.11 0.838 0.042
22 258532_at AT3G06700 [Ribosomal L29e protein family] 0.837 1.480
23 251486_at AT3G59540 [Ribosomal L38e protein family] 0.835 0.032
24 250287_at AT5G13330 Rap2.6L, related to AP2 6l 0.831 -0.364
25 246228_at AT4G36430 [Peroxidase superfamily protein] 0.821 0.307
26 253203_at AT4G34710 ADC2, arginine decarboxylase 2, ATADC2, SPE2 0.820 1.046
27 255080_at AT4G09030 AGP10, arabinogalactan protein 10, ATAGP10 0.781 1.167
28 251846_at AT3G54560 HTA11, histone H2A 11 0.780 0.809
29 264262_at AT1G09200 H3.1, histone 3.1 0.753 0.559
30 257008_at AT3G14210 ESM1, epithiospecifier modifier 1 0.746 1.389
31 263212_at AT1G10510 emb2004, embryo defective 2004 0.746 0.246
32 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.736 -0.634
33 259757_at AT1G77510 ATPDI6, PROTEIN DISULFIDE ISOMERASE 6, ATPDIL1-2, PDI-like 1-2, PDI6, PROTEIN DISULFIDE ISOMERASE 6, PDIL1-2, PDI-like 1-2 0.728 0.250
34 265076_at AT1G55490 CPN60B, chaperonin 60 beta, Cpn60beta1, chaperonin-60beta1, LEN1, LESION INITIATION 1 0.724 1.147
35 266256_at AT2G27710 [60S acidic ribosomal protein family] 0.716 1.147
36 252272_at AT3G49670 BAM2, BARELY ANY MERISTEM 2 0.706 0.213
37 264689_at AT1G09900 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.704 -0.498
38 265671_at AT2G32060 [Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein] 0.704 1.367
39 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.699 0.543
40 259196_at AT3G03600 RPS2, ribosomal protein S2 0.698 0.032
41 251966_at AT3G53380 LecRK-VIII.1, L-type lectin receptor kinase VIII.1 0.686 -0.349
42 253949_at AT4G26780 AR192, MGE2, mitochondrial GrpE 2 0.684 -0.387
43 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.674 0.307
44 251476_at AT3G59670 unknown 0.673 -0.418
45 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.671 -0.292
46 264438_at AT1G27400 [Ribosomal protein L22p/L17e family protein] 0.659 1.302
47 253566_at AT4G31210 [DNA topoisomerase, type IA, core] 0.655 0.168
48 247654_at AT5G59850 [Ribosomal protein S8 family protein] 0.647 0.579
49 247032_at AT5G67240 SDN3, small RNA degrading nuclease 3 0.645 0.145
50 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.643 0.057
51 251029_at AT5G02050 [Mitochondrial glycoprotein family protein] 0.642 0.137
52 247109_at AT5G65870 ATPSK5, phytosulfokine 5 precursor, PSK5, PSK5, phytosulfokine 5 precursor 0.636 0.673
53 247268_at AT5G64080 AtXYP1, XYP1, xylogen protein 1 0.635 -0.124
54 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.635 -0.386
55 253666_at AT4G30270 MERI-5, MERISTEM 5, MERI5B, meristem-5, SEN4, SENESCENCE 4, XTH24, xyloglucan endotransglucosylase/hydrolase 24 -1.000 0.263
56 245076_at AT2G23170 GH3.3 -0.759 -0.456
57 253010_at AT4G37750 ANT, AINTEGUMENTA, CKC, CKC1, COMPLEMENTING A PROTEIN KINASE C MUTANT 1, DRG, DRAGON -0.644 -0.502
58 251509_at AT3G59010 PME35, pectin methylesterase 35, PME61, pectin methylesterase 61 -0.638 0.336
59 262122_at AT1G02790 PGA4, polygalacturonase 4 -0.610 -0.642
60 259996_at AT1G67910 unknown -0.603 0.032
61 262438_at AT1G47410 unknown -0.597 0.007
62 255246_at AT4G05640 unknown -0.597 -1.004
63 253501_at AT4G32010 HSI2-L1, HSL1, HSI2-like 1, VAL2, VP1/ABI3-LIKE 2 -0.556 -0.023
64 257615_at AT3G26510 [Octicosapeptide/Phox/Bem1p family protein] -0.530 0.250
65 258797_at AT3G04730 IAA16, indoleacetic acid-induced protein 16 -0.499 1.353
66 258672_at AT3G08570 [Phototropic-responsive NPH3 family protein] -0.492 0.286
67 253193_at AT4G35380 [SEC7-like guanine nucleotide exchange family protein] -0.490 -0.953
68 267305_at AT2G30070 ATKT1, potassium transporter 1, ATKT1P, ATKUP1, KT1, potassium transporter 1, KUP1, POTASSIUM UPTAKE TRANSPORTER 1 -0.489 0.924
69 256435_at AT3G11180 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.488 -1.329
70 260242_at AT1G63650 AtEGL3, ATMYC-2, EGL1, EGL3, ENHANCER OF GLABRA 3 -0.486 -0.632
71 253588_at AT4G30790 [INVOLVED IN: autophagy] -0.478 -0.147
72 264083_at AT2G31230 ATERF15, ethylene-responsive element binding factor 15, ERF15, ethylene-responsive element binding factor 15 -0.464 0.432
73 248801_at AT5G47370 HAT2 -0.463 -0.065
74 250240_at AT5G13590 unknown -0.457 -0.043
75 258503_at AT3G02500 unknown -0.456 -0.993
76 249447_at AT5G39400 ATPTEN1, PTEN1, Phosphatase and TENsin homolog deleted on chromosome ten 1 -0.456 -0.937
77 261453_at AT1G21130 IGMT4, indole glucosinolate O-methyltransferase 4 -0.454 0.365
78 262700_at AT1G76020 [Thioredoxin superfamily protein] -0.444 0.023
79 258726_at AT3G11745 unknown -0.444 -0.202
80 266111_at AT2G02061 [Nucleotide-diphospho-sugar transferase family protein] -0.442 -0.396
81 263942_at AT2G35860 FLA16, FASCICLIN-like arabinogalactan protein 16 precursor -0.440 0.306
82 262171_at AT1G74950 JAZ2, JASMONATE-ZIM-DOMAIN PROTEIN 2, TIFY10B -0.420 0.163
83 251196_at AT3G62950 [Thioredoxin superfamily protein] -0.420 0.377
84 264430_at AT1G61680 ATTPS14, TERPENE SYNTHASE 14, TPS14, terpene synthase 14 -0.407 -0.193
85 249306_at AT5G41400 [RING/U-box superfamily protein] -0.406 -0.102
86 256872_at AT3G26490 [Phototropic-responsive NPH3 family protein] -0.401 0.634
87 253038_at AT4G37790 HAT22 -0.380 0.601
88 266423_at AT2G41340 RPB5D, RNA polymerase II fifth largest subunit, D -0.378 -0.888
89 253966_at AT4G26520 AtFBA7, FBA7, fructose-bisphosphate aldolase 7 -0.377 -0.069
90 262228_at AT1G68690 AtPERK9, proline-rich extensin-like receptor kinase 9, PERK9, proline-rich extensin-like receptor kinase 9 -0.377 -0.025
91 245416_at AT4G17350 unknown -0.375 0.208
92 264826_at AT1G03410 2A6 -0.372 -0.663
93 262031_x_at AT1G37160 [gypsy-like retrotransposon family (Athila), similar to putative Athila retroelement ORF1 protein GI:4567296 from (Arabidopsis thaliana)] -0.368 -0.303
94 259535_at AT1G12280 SUMM2, suppressor of mkk1 mkk2 2 -0.364 -0.225
95 250216_at AT5G14090 AtLAZY1, LAZY1, LAZY 1 -0.353 0.243
96 251448_at AT3G59845 [Zinc-binding dehydrogenase family protein] -0.350 -0.064
97 252200_at AT3G50280 [HXXXD-type acyl-transferase family protein] -0.346 -0.891
98 261922_at AT1G65890 AAE12, acyl activating enzyme 12 -0.344 -1.180
99 250365_at AT5G11410 [Protein kinase superfamily protein] -0.341 -0.288
100 259000_at AT3G01860 unknown -0.341 0.449
101 255854_at AT1G67050 unknown -0.340 0.267
102 246999_at AT5G67440 MEL2, MAB4/ENP/NPY1-LIKE 2, NPY3, NAKED PINS IN YUC MUTANTS 3 -0.337 -0.559
103 249093_at AT5G43880 TRM21, TON1 Recruiting Motif 21 -0.328 0.561
104 264788_at AT2G17880 DJC24, DNA J protein C24 -0.327 -0.231
105 264828_at AT1G03380 ATATG18G, homolog of yeast autophagy 18 (ATG18) G, ATG18G, homolog of yeast autophagy 18 (ATG18) G -0.322 -0.061
106 249647_at AT5G37040 [F-box family protein] -0.320 -0.867
107 251497_at AT3G59060 PIF5, PHYTOCHROME-INTERACTING FACTOR 5, PIL6, phytochrome interacting factor 3-like 6 -0.313 0.381