4.0:Information of module
Cambium 5 days NAA
In comparison with AvrRpt2 Col-0 6hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009814 defense response, incompatible interacti... BP 3.991e-11
GO:0009627 systemic acquired resistance BP 7.301e-11
GO:0043207 response to external biotic stimulus BP 5.119e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042546 cell wall biogenesis BP 5.480e-20
GO:0009834 plant-type secondary cell wall biogenesi... BP 1.169e-16
GO:0010413 glucuronoxylan metabolic process BP 1.169e-16
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Cambium 5 days NAA		 Log2 signal ratio
AvrRpt2 Col-0 6hpi
1 256825_at AT3G22120 CWLP, cell wall-plasma membrane linker protein 1.354 -0.065
2 250464_at AT5G10040 unknown 1.316 0.117
3 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 1.205 0.323
4 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 1.159 0.131
5 261023_at AT1G12200 FMO, flavin monooxygenase 1.151 0.404
6 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 1.128 -0.037
7 255807_at AT4G10270 [Wound-responsive family protein] 1.053 -0.078
8 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 1.041 0.366
9 254726_at AT4G13660 ATPRR2, PRR2, pinoresinol reductase 2 1.012 0.089
10 245385_at AT4G14020 [Rapid alkalinization factor (RALF) family protein] 1.012 -0.040
11 255110_at AT4G08770 Prx37, peroxidase 37 1.011 0.729
12 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 1.007 0.012
13 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.993 0.684
14 250798_at AT5G05340 PRX52, peroxidase 52 0.979 0.680
15 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 0.978 0.236
16 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 0.971 0.019
17 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.971 0.822
18 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 0.969 0.180
19 258083_at AT3G25855 [Copper transport protein family] 0.959 0.124
20 258064_at AT3G14680 CYP72A14, cytochrome P450, family 72, subfamily A, polypeptide 14 0.932 0.007
21 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 0.927 0.669
22 262325_at AT1G64160 AtDIR5, DIR5, dirigent protein 5 0.891 0.085
23 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 0.885 0.331
24 248684_at AT5G48485 DIR1, DEFECTIVE IN INDUCED RESISTANCE 1 0.883 -0.124
25 263680_at AT1G26930 [Galactose oxidase/kelch repeat superfamily protein] 0.878 0.081
26 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 0.877 0.026
27 245725_at AT1G73370 ATSUS6, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 6, SUS6, sucrose synthase 6 0.859 0.128
28 256646_at AT3G13590 [Cysteine/Histidine-rich C1 domain family protein] 0.850 0.064
29 254630_at AT4G18360 GOX3, glycolate oxidase 3 0.849 -0.114
30 250090_at AT5G17330 GAD, glutamate decarboxylase, GAD1, GLUTAMATE DECARBOXYLASE 1 0.817 0.839
31 258969_at AT3G10680 [HSP20-like chaperones superfamily protein] 0.817 0.107
32 258815_at AT3G04000 [NAD(P)-binding Rossmann-fold superfamily protein] 0.811 0.174
33 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 0.791 0.411
34 252457_at AT3G47180 [RING/U-box superfamily protein] 0.788 0.129
35 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 0.778 -0.053
36 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.775 0.107
37 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.767 0.688
38 250070_at AT5G17980 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.765 0.045
39 255111_at AT4G08780 [Peroxidase superfamily protein] 0.755 0.572
40 249531_at AT5G38770 AtGDU7, glutamine dumper 7, GDU7, glutamine dumper 7 0.753 0.103
41 247024_at AT5G66985 unknown 0.752 0.063
42 257654_at AT3G13310 DJC66, DNA J protein C66 0.752 0.498
43 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0.735 0.739
44 266119_at AT2G02100 LCR69, low-molecular-weight cysteine-rich 69, PDF2.2 0.733 0.204
45 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.724 0.388
46 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] 0.721 -0.068
47 250152_at AT5G15120 unknown 0.719 0.086
48 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 0.702 0.822
49 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 0.702 -0.115
50 255080_at AT4G09030 AGP10, arabinogalactan protein 10, ATAGP10 0.702 0.240
51 262905_at AT1G59730 ATH7, thioredoxin H-type 7, TH7, thioredoxin H-type 7 0.685 0.002
52 265479_at AT2G15760 unknown 0.684 0.407
53 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 0.684 0.013
54 259757_at AT1G77510 ATPDI6, PROTEIN DISULFIDE ISOMERASE 6, ATPDIL1-2, PDI-like 1-2, PDI6, PROTEIN DISULFIDE ISOMERASE 6, PDIL1-2, PDI-like 1-2 0.682 0.350
55 252882_at AT4G39675 unknown 0.655 0.040
56 267266_at AT2G23150 ATNRAMP3, NRAMP3, natural resistance-associated macrophage protein 3 0.637 0.122
57 261893_at AT1G80690 [PPPDE putative thiol peptidase family protein] 0.634 -0.191
58 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.622 0.593
59 260528_at AT2G47260 ATWRKY23, WRKY DNA-BINDING PROTEIN 23, WRKY23, WRKY DNA-binding protein 23 0.614 0.162
60 257952_at AT3G21770 [Peroxidase superfamily protein] 0.607 0.025
61 259507_at AT1G43910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.606 0.723
62 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.605 -0.053
63 262001_at AT1G33790 [jacalin lectin family protein] 0.600 -0.106
64 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.599 -0.037
65 261930_at AT1G22440 [Zinc-binding alcohol dehydrogenase family protein] 0.597 0.193
66 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.595 0.270
67 259788_at AT1G29670 [GDSL-like Lipase/Acylhydrolase superfamily protein] -1.344 -0.181
68 246380_at AT1G57750 CYP96A15, cytochrome P450, family 96, subfamily A, polypeptide 15, MAH1, MID-CHAIN ALKANE HYDROXYLASE 1 -1.219 -0.007
69 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 -1.162 -0.159
70 249227_at AT5G42180 PER64, peroxidase 64 -1.135 0.058
71 264495_at AT1G27380 RIC2, ROP-interactive CRIB motif-containing protein 2 -1.123 0.059
72 256168_at AT1G51805 [Leucine-rich repeat protein kinase family protein] -1.113 -0.224
73 265894_at AT2G15050 LTP, lipid transfer protein, LTP7, lipid transfer protein 7 -1.108 -0.287
74 263482_at AT2G03980 [GDSL-like Lipase/Acylhydrolase superfamily protein] -1.075 -0.184
75 261395_at AT1G79700 WRI4, WRINKLED 4 -1.073 -0.398
76 265342_at AT2G18300 HBI1, HOMOLOG OF BEE2 INTERACTING WITH IBH 1 -1.028 -0.745
77 254122_at AT4G24510 CER2, ECERIFERUM 2, VC-2, VC2 -1.016 -0.022
78 260267_at AT1G68530 CER6, ECERIFERUM 6, CUT1, CUTICULAR 1, G2, KCS6, 3-ketoacyl-CoA synthase 6, POP1, POLLEN-PISTIL INCOMPATIBILITY 1 -0.971 -0.169
79 247921_at AT5G57660 ATCOL5, BBX6, B-box domain protein 6, COL5, CONSTANS-like 5 -0.963 -0.105
80 255756_at AT1G19940 AtGH9B5, glycosyl hydrolase 9B5, GH9B5, glycosyl hydrolase 9B5 -0.959 -0.086
81 259466_at AT1G19050 ARR7, response regulator 7 -0.952 -0.303
82 246275_at AT4G36540 BEE2, BR enhanced expression 2 -0.946 -0.908
83 264774_at AT1G22890 unknown -0.944 0.034
84 263709_at AT1G09310 unknown -0.939 -0.087
85 267298_at AT2G23760 BLH4, BEL1-like homeodomain 4, SAW2, SAWTOOTH 2 -0.931 -0.266
86 261703_at AT1G32770 ANAC012, NAC domain containing protein 12, NAC012, NAC domain containing protein 12, NST3, NAC SECONDARY WALL THICKENING PROMOTING 3, SND1, SECONDARY WALL-ASSOCIATED NAC DOMAIN 1 -0.907 0.027
87 256221_at AT1G56300 [Chaperone DnaJ-domain superfamily protein] -0.902 0.144
88 246633_at AT1G29720 [Leucine-rich repeat transmembrane protein kinase] -0.901 -0.197
89 252280_at AT3G49260 iqd21, IQ-domain 21 -0.895 -0.678
90 257757_at AT3G18660 GUX1, glucuronic acid substitution of xylan 1, PGSIP1, plant glycogenin-like starch initiation protein 1 -0.888 0.024
91 252543_at AT3G45780 JK224, NPH1, NONPHOTOTROPIC HYPOCOTYL 1, PHOT1, phototropin 1, RPT1, ROOT PHOTOTROPISM 1 -0.880 -0.502
92 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] -0.869 -0.303
93 255331_at AT4G04330 AtRbcX1, RbcX1, homologue of cyanobacterial RbcX 1 -0.864 -0.208
94 257233_at AT3G15050 IQD10, IQ-domain 10 -0.857 -0.026
95 251297_at AT3G62020 GLP10, germin-like protein 10 -0.851 -0.042
96 263841_at AT2G36870 AtXTH32, XTH32, xyloglucan endotransglucosylase/hydrolase 32 -0.849 -0.275
97 247882_at AT5G57785 unknown -0.837 0.093
98 258851_at AT3G03190 ATGSTF11, glutathione S-transferase F11, ATGSTF6, ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, GSTF11, glutathione S-transferase F11 -0.836 -0.509
99 260326_at AT1G63910 AtMYB103, myb domain protein 103, MYB103, myb domain protein 103 -0.811 0.017
100 263513_at AT2G12400 unknown -0.806 -0.248
101 260666_at AT1G19300 ATGATL1, GATL1, GALACTURONOSYLTRANSFERASE-LIKE 1, GLZ1, GAOLAOZHUANGREN 1, PARVUS, PARVUS -0.803 0.265
102 261913_at AT1G65860 FMO GS-OX1, flavin-monooxygenase glucosinolate S-oxygenase 1 -0.793 -0.222
103 262612_at AT1G14150 PnsL2, Photosynthetic NDH subcomplex L 2, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.787 -0.420
104 250182_at AT5G14470 AtGALK2, GALK2, galactokinase 2 -0.782 0.037
105 245970_at AT5G20710 BGAL7, beta-galactosidase 7 -0.776 0.011
106 265511_at AT2G05540 [Glycine-rich protein family] -0.774 -0.061
107 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 -0.766 -0.854
108 257793_at AT3G26960 [Pollen Ole e 1 allergen and extensin family protein] -0.756 -0.610
109 252115_at AT3G51600 LTP5, lipid transfer protein 5 -0.754 -0.122
110 246908_at AT5G25610 ATRD22, RD22, RESPONSIVE TO DESSICATION 22 -0.752 0.042
111 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B -0.749 -0.438
112 251303_at AT3G61910 ANAC066, NAC domain protein 66, NAC066, NAC domain protein 66, NST2, NAC SECONDARY WALL THICKENING PROMOTING FACTOR2 -0.748 0.021
113 260205_at AT1G70700 JAZ9, JASMONATE-ZIM-DOMAIN PROTEIN 9, TIFY7 -0.738 -0.053
114 251785_at AT3G55130 ABCG19, ATP-binding cassette G19, ATWBC19, white-brown complex homolog 19, WBC19, white-brown complex homolog 19 -0.734 -0.212
115 248812_at AT5G47330 [alpha/beta-Hydrolases superfamily protein] -0.728 0.686
116 252412_at AT3G47295 unknown -0.725 -0.164
117 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 -0.724 0.046
118 254998_at AT4G09760 [Protein kinase superfamily protein] -0.724 -0.290
119 257859_at AT3G12955 SAUR74, SMALL AUXIN UPREGULATED RNA 74 -0.712 0.019
120 267141_at AT2G38090 [Duplicated homeodomain-like superfamily protein] -0.712 -0.125
121 257628_at AT3G26290 CYP71B26, cytochrome P450, family 71, subfamily B, polypeptide 26 -0.709 -0.203
122 246097_at AT5G20270 HHP1, heptahelical transmembrane protein1 -0.706 -0.106
123 248121_at AT5G54690 GAUT12, galacturonosyltransferase 12, IRX8, IRREGULAR XYLEM 8, LGT6 -0.705 0.070
124 266526_at AT2G16980 [Major facilitator superfamily protein] -0.704 0.012
125 260531_at AT2G47240 CER8, ECERIFERUM 8, LACS1, LONG-CHAIN ACYL-COA SYNTHASE 1 -0.704 0.043
126 260395_at AT1G69780 ATHB13 -0.699 -0.386
127 249472_at AT5G39210 CRR7, CHLORORESPIRATORY REDUCTION 7 -0.699 -0.458
128 260490_at AT1G51500 ABCG12, ATP-binding cassette G12, AtABCG12, ATWBC12, ARABIDOPSIS THALIANA WHITE-BROWN COMPLEX 12, CER5, ECERIFERUM 5, D3, WBC12, WHITE-BROWN COMPLEX 12 -0.692 -0.153
129 261928_at AT1G22480 [Cupredoxin superfamily protein] -0.686 0.069
130 254924_at AT4G11330 ATMPK5, MAP kinase 5, MPK5, MAP kinase 5 -0.686 0.050
131 264195_at AT1G22690 [Gibberellin-regulated family protein] -0.677 -0.195