4.0:Information of module
tt4 UV
In comparison with root epidermis and lateral root cap 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0036294 cellular response to decreased oxygen le... BP 5.563e-03
GO:0071453 cellular response to oxygen levels BP 5.563e-03
GO:0009888 tissue development BP 7.920e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009832 plant-type cell wall biogenesis BP 8.253e-06
GO:0042546 cell wall biogenesis BP 1.592e-05
GO:0009411 response to UV BP 1.638e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
tt4 UV		 Log2 signal ratio
root epidermis and lateral root cap 40 mM NaCl
1 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.304 0.515
2 252081_at AT3G51910 AT-HSFA7A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, HSFA7A, heat shock transcription factor A7A 0.111 0.190
3 245341_at AT4G16447 unknown 0.111 -0.051
4 265345_at AT2G22680 WAVH1, WAV3 homolog 1 0.096 0.433
5 265983_at AT2G18550 ATHB21, homeobox protein 21, HB-2, homeobox-2, HB21, homeobox protein 21 0.073 -0.036
6 247035_at AT5G67110 ALC, ALCATRAZ 0.072 -0.169
7 248017_at AT5G56460 [Protein kinase superfamily protein] 0.068 0.089
8 266182_at AT2G02370 [SNARE associated Golgi protein family] 0.062 0.271
9 263070_at AT2G17600 [Cysteine/Histidine-rich C1 domain family protein] 0.057 -0.112
10 256757_at AT3G25620 ABCG21, ATP-binding cassette G21 0.057 -0.017
11 260353_at AT1G69230 SP1L2, SPIRAL1-like2 0.053 -0.032
12 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 -0.892 -0.533
13 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) -0.173 -0.102
14 262782_at AT1G13195 [RING/U-box superfamily protein] -0.139 0.403
15 251903_at AT3G54120 [Reticulon family protein] -0.122 -0.160
16 253434_at AT4G32500 AKT5, K+ transporter 5, KT5, K+ transporter 5 -0.096 -0.089
17 266729_at AT2G03130 [Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein] -0.094 -0.019
18 261712_at AT1G32780 [GroES-like zinc-binding dehydrogenase family protein] -0.091 -0.058
19 257076_at AT3G19680 unknown -0.087 -0.259
20 247146_at AT5G65610 unknown -0.080 -0.071
21 260233_at AT1G74550 CYP98A9, cytochrome P450, family 98, subfamily A, polypeptide 9 -0.078 -0.083