4.0:Information of module
tt4 UV
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0036294 cellular response to decreased oxygen le... BP 5.563e-03
GO:0071453 cellular response to oxygen levels BP 5.563e-03
GO:0009888 tissue development BP 7.920e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009832 plant-type cell wall biogenesis BP 8.253e-06
GO:0042546 cell wall biogenesis BP 1.592e-05
GO:0009411 response to UV BP 1.638e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
tt4 UV		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.304 0.143
2 252081_at AT3G51910 AT-HSFA7A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, HSFA7A, heat shock transcription factor A7A 0.111 -0.078
3 245341_at AT4G16447 unknown 0.111 0.171
4 265345_at AT2G22680 WAVH1, WAV3 homolog 1 0.096 -0.019
5 265983_at AT2G18550 ATHB21, homeobox protein 21, HB-2, homeobox-2, HB21, homeobox protein 21 0.073 0.057
6 247035_at AT5G67110 ALC, ALCATRAZ 0.072 0.116
7 248017_at AT5G56460 [Protein kinase superfamily protein] 0.068 0.076
8 266182_at AT2G02370 [SNARE associated Golgi protein family] 0.062 0.034
9 263070_at AT2G17600 [Cysteine/Histidine-rich C1 domain family protein] 0.057 -0.152
10 256757_at AT3G25620 ABCG21, ATP-binding cassette G21 0.057 0.018
11 260353_at AT1G69230 SP1L2, SPIRAL1-like2 0.053 0.139
12 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 -0.892 -0.158
13 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) -0.173 -0.130
14 262782_at AT1G13195 [RING/U-box superfamily protein] -0.139 0.019
15 251903_at AT3G54120 [Reticulon family protein] -0.122 -0.087
16 253434_at AT4G32500 AKT5, K+ transporter 5, KT5, K+ transporter 5 -0.096 0.220
17 266729_at AT2G03130 [Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein] -0.094 -0.079
18 261712_at AT1G32780 [GroES-like zinc-binding dehydrogenase family protein] -0.091 0.081
19 257076_at AT3G19680 unknown -0.087 -0.024
20 247146_at AT5G65610 unknown -0.080 -0.017
21 260233_at AT1G74550 CYP98A9, cytochrome P450, family 98, subfamily A, polypeptide 9 -0.078 -0.127