4.0:Information of module
tt4
In comparison with aerial organ callus inducing medium 24h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 2.257e-03
GO:0032958 inositol phosphate biosynthetic process BP 2.257e-03
GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 2.257e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006354 DNA-templated transcription, elongation BP 2.012e-07
GO:0015979 photosynthesis BP 2.803e-05
GO:0019684 photosynthesis, light reaction BP 3.007e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
tt4		 Log2 signal ratio
aerial organ callus inducing medium 24h
1 246664_at AT5G34800 [pseudogene] 0.215 0.002
2 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 0.138 -0.765
3 251972_at AT3G53170 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.117 -0.020
4 252223_at AT3G49850 ATTRB3, TBP2, TELOMERE-BINDING PROTEIN 2, TRB3, telomere repeat binding factor 3 0.102 -0.132
5 266824_at AT2G22800 HAT9 0.097 -0.186
6 260073_at AT1G73660 SIS8, SUGAR INSENSITIVE 8 0.088 -0.095
7 263252_at AT2G31380 BBX25, B-box domain protein 25, STH, salt tolerance homologue 0.085 -0.167
8 256541_at AT1G42540 ATGLR3.3, GLR3.3, glutamate receptor 3.3 0.072 -0.121
9 251404_at AT3G60310 unknown 0.070 -0.031
10 260062_at AT1G73710 [Pentatricopeptide repeat (PPR) superfamily protein] 0.064 -0.004
11 256574_at AT3G14780 unknown 0.064 -0.046
12 245055_at AT2G26470 unknown 0.060 -0.107
13 247100_at AT5G66520 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.059 -0.467
14 262565_at AT1G34320 unknown 0.059 0.095
15 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) -0.216 0.149
16 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 -0.193 -0.259
17 262782_at AT1G13195 [RING/U-box superfamily protein] -0.141 0.125
18 244921_s_at ATMG01000 ORF114 -0.122 0.056
19 257059_at AT3G15280 unknown -0.114 -0.029
20 261163_x_at AT1G34410 ARF21, auxin response factor 21 -0.096 0.044
21 258745_at AT3G05920 [Heavy metal transport/detoxification superfamily protein ] -0.091 0.418
22 257549_at AT3G18650 AGL103, AGAMOUS-like 103 -0.084 -0.025
23 255658_at AT4G00770 TRM9, TON1 Recruiting Motif 9 -0.083 0.057
24 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 -0.082 0.631
25 262855_at AT1G20860 PHT1;8, phosphate transporter 1;8 -0.080 -0.044
26 257945_at AT3G21860 ASK10, SKP1-like 10, SK10, SKP1-like 10 -0.079 0.034
27 256256_at AT3G11230 [Yippee family putative zinc-binding protein] -0.076 -0.039