4.0:Information of module
Control KNO3 roots - 8hours
In comparison with 21h-DC3000 hrpA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006644 phospholipid metabolic process BP 9.683e-07
GO:0008654 phospholipid biosynthetic process BP 1.517e-06
GO:0044711 single-organism biosynthetic process BP 1.905e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010118 stomatal movement BP 6.779e-03
GO:0035725 sodium ion transmembrane transport BP 8.211e-03
GO:0042446 hormone biosynthetic process BP 1.555e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Control KNO3 roots - 8hours		 Log2 signal ratio
21h-DC3000 hrpA
1 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.658 -0.218
2 252882_at AT4G39675 unknown 0.555 0.024
3 250472_at AT5G10210 unknown 0.496 -0.056
4 245912_at AT5G19600 SULTR3;5, sulfate transporter 3;5 0.424 -0.049
5 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] 0.378 -0.078
6 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.370 0.005
7 258629_at AT3G02850 SKOR, STELAR K+ outward rectifier 0.321 -0.036
8 253317_at AT4G33960 unknown 0.300 0.030
9 246142_at AT5G19970 unknown 0.284 -0.005
10 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 0.282 -0.004
11 250597_at AT5G07680 ANAC079, Arabidopsis NAC domain containing protein 79, ANAC080, NAC domain containing protein 80, ATNAC4, NAC080, NAC domain containing protein 80, NAC4 0.276 -0.056
12 263319_at AT2G47160 AtBOR1, BOR1, REQUIRES HIGH BORON 1 0.276 -0.002
13 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H 0.260 -0.026
14 249606_at AT5G37260 CIR1, CIRCADIAN 1, RVE2, REVEILLE 2 0.252 -0.052
15 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.236 0.007
16 253049_at AT4G37300 MEE59, maternal effect embryo arrest 59 0.230 -0.041
17 261684_at AT1G47400 unknown 0.217 -0.064
18 246238_at AT4G36670 AtPLT6, AtPMT6, PLT6, polyol transporter 6, PMT6, polyol/monosaccharide transporter 6 0.216 -0.072
19 262231_at AT1G68740 PHO1;H1 0.214 -0.011
20 247443_at AT5G62720 [Integral membrane HPP family protein] 0.197 0.052
21 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 0.196 -0.056
22 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.193 -0.011
23 259015_at AT3G07350 unknown 0.191 -0.092
24 255479_at AT4G02380 AtLEA5, Arabidopsis thaliana late embryogenensis abundant like 5, SAG21, senescence-associated gene 21 0.190 -0.039
25 245776_at AT1G30260 unknown 0.185 -0.061
26 251154_at AT3G63110 ATIPT3, isopentenyltransferase 3, IPT3, isopentenyltransferase 3 0.184 -0.007
27 258437_at AT3G16560 [Protein phosphatase 2C family protein] 0.174 -0.042
28 247452_at AT5G62430 CDF1, cycling DOF factor 1 0.173 -0.018
29 259996_at AT1G67910 unknown 0.173 -0.013
30 260059_at AT1G78090 ATTPPB, Arabidopsis thaliana trehalose-6-phosphate phosphatase B, TPPB, trehalose-6-phosphate phosphatase B 0.167 0.026
31 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 0.167 -0.014
32 251491_at AT3G59480 [pfkB-like carbohydrate kinase family protein] 0.165 -0.104
33 249769_at AT5G24120 ATSIG5, SIGMA FACTOR 5, SIG5, SIGMA FACTOR 5, SIGE, sigma factor E 0.159 -0.041
34 255734_at AT1G25550 [myb-like transcription factor family protein] 0.157 -0.022
35 249357_at AT5G40490 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.150 0.053
36 260877_at AT1G21500 unknown 0.149 -0.018
37 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related 0.143 -0.035
38 261791_at AT1G16170 unknown 0.143 -0.008
39 259738_at AT1G64355 unknown 0.143 -0.012
40 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 0.143 -0.244
41 254041_at AT4G25830 [Uncharacterised protein family (UPF0497)] 0.142 0.023
42 250828_at AT5G05250 unknown 0.140 -0.058
43 245296_at AT4G16370 oligopeptide transporter 0.139 -0.011
44 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 0.135 0.079
45 257831_at AT3G26710 CCB1, cofactor assembly of complex C 0.130 0.026
46 246996_at AT5G67420 ASL39, ASYMMETRIC LEAVES2-LIKE 39, LBD37, LOB domain-containing protein 37 0.129 -0.020
47 262443_at AT1G47655 [Dof-type zinc finger DNA-binding family protein] 0.129 0.009
48 249493_at AT5G39080 [HXXXD-type acyl-transferase family protein] 0.127 0.004
49 256891_at AT3G19030 unknown 0.126 -0.017
50 251665_at AT3G57040 ARR9, response regulator 9, ATRR4, RESPONSE REGULATOR 4 0.124 -0.017
51 247476_at AT5G62330 unknown 0.123 -0.073
52 254795_at AT4G12990 unknown 0.121 0.028
53 248224_at AT5G53490 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.116 0.001
54 253737_at AT4G28703 [RmlC-like cupins superfamily protein] 0.115 0.050
55 262168_at AT1G74730 unknown 0.115 -0.005
56 248050_at AT5G56100 [glycine-rich protein / oleosin] 0.114 0.021
57 260393_at AT1G73920 [alpha/beta-Hydrolases superfamily protein] 0.114 -0.010
58 253155_at AT4G35720 unknown 0.112 -0.076
59 245229_at AT4G25620 [hydroxyproline-rich glycoprotein family protein] 0.111 -0.006
60 246713_at AT5G28210 [mRNA capping enzyme family protein] 0.111 -0.007
61 267003_at AT2G34340 unknown 0.110 -0.006
62 245354_at AT4G17600 LIL3:1 0.107 0.014
63 265559_at AT2G05530 [Glycine-rich protein family] 0.106 -0.005
64 250075_at AT5G17670 [alpha/beta-Hydrolases superfamily protein] 0.105 -0.008
65 247591_at AT5G60770 ATNRT2.4, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.4, NRT2.4, nitrate transporter 2.4 -0.728 0.012
66 257143_at AT3G20110 CYP705A20, cytochrome P450, family 705, subfamily A, polypeptide 20 -0.349 -0.024
67 255957_at AT1G22160 unknown -0.294 -0.038
68 248577_at AT5G49870 [Mannose-binding lectin superfamily protein] -0.257 -0.018
69 253408_at AT4G32950 [Protein phosphatase 2C family protein] -0.221 -0.039
70 264562_at AT1G55760 [BTB/POZ domain-containing protein] -0.186 -0.002
71 259454_at AT1G44050 [Cysteine/Histidine-rich C1 domain family protein] -0.172 -0.119
72 246912_at AT5G25820 [Exostosin family protein] -0.169 0.078
73 255648_at AT4G00910 [Aluminium activated malate transporter family protein] -0.167 -0.110
74 263330_at AT2G15320 [Leucine-rich repeat (LRR) family protein] -0.166 -0.017
75 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 -0.161 -0.005
76 264324_at AT1G04160 ATXIB, ARABIDOPSIS THALIANA MYOSIN XI B, XI-8, MYOSIN XI-8, XI-B, MYOSIN XI B, XIB, myosin XI B -0.161 0.011
77 263232_at AT1G05700 [Leucine-rich repeat transmembrane protein kinase protein] -0.158 0.028
78 247751_at AT5G59050 unknown -0.156 -0.001
79 247581_at AT5G61350 [Protein kinase superfamily protein] -0.156 -0.018
80 259888_at AT1G76350 NLP5, NIN-like protein 5 -0.153 0.019
81 263136_at AT1G78580 ATTPS1, trehalose-6-phosphate synthase, TPS1, trehalose-6-phosphate synthase, TPS1, TREHALOSE-6-PHOSPHATE SYNTHASE 1 -0.151 -0.037
82 253088_at AT4G36220 CYP84A1, CYTOCHROME P450 84A1, FAH1, ferulic acid 5-hydroxylase 1 -0.151 0.011
83 259540_at AT1G20640 NLP4, NIN-like protein 4 -0.150 0.004
84 256283_at AT3G12540 unknown -0.148 -0.026
85 262275_at AT1G68710 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.145 0.043
86 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] -0.145 0.017
87 249955_at AT5G18840 [Major facilitator superfamily protein] -0.144 -0.079
88 255807_at AT4G10270 [Wound-responsive family protein] -0.137 -0.090
89 267089_at AT2G38300 [myb-like HTH transcriptional regulator family protein] -0.135 0.094
90 248990_at AT5G45210 [Disease resistance protein (TIR-NBS-LRR class) family] -0.134 0.058
91 256358_at AT1G66470 AtRHD6, RHD6, ROOT HAIR DEFECTIVE6 -0.133 0.030
92 264621_at AT2G17700 STY8, serine/threonine/tyrosine kinase 8 -0.131 -0.047
93 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 -0.131 0.001
94 258663_at AT3G08670 unknown -0.131 0.012
95 258143_at AT3G18170 [Glycosyltransferase family 61 protein] -0.131 -0.026
96 251197_at AT3G62960 [Thioredoxin superfamily protein] -0.130 -0.150
97 252046_at AT3G52460 [hydroxyproline-rich glycoprotein family protein] -0.128 0.012
98 262972_at AT1G75620 [glyoxal oxidase-related protein] -0.125 -0.002
99 261581_at AT1G01140 CIPK9, CBL-interacting protein kinase 9, PKS6, PROTEIN KINASE 6, SnRK3.12, SNF1-RELATED PROTEIN KINASE 3.12 -0.125 -0.026
100 246459_at AT5G16900 [Leucine-rich repeat protein kinase family protein] -0.123 -0.075
101 259557_at AT1G21210 WAK4, wall associated kinase 4 -0.121 0.006
102 253975_at AT4G26600 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.118 0.156
103 245979_at AT5G13150 ATEXO70C1, exocyst subunit exo70 family protein C1, EXO70C1, exocyst subunit exo70 family protein C1 -0.116 -0.023
104 263470_at AT2G31900 ATMYO5, MYOSIN 5, ATXIF, MYOSIN XI F, XIF, myosin-like protein XIF -0.113 -0.027
105 248006_at AT5G56250 HAP8, HAPLESS 8 -0.112 -0.031
106 256150_at AT1G55120 AtcwINV3, 6-fructan exohydrolase, ATFRUCT5, beta-fructofuranosidase 5, FRUCT5, beta-fructofuranosidase 5 -0.112 0.013
107 245604_at AT4G14290 [alpha/beta-Hydrolases superfamily protein] -0.110 -0.020
108 260143_at AT1G71880 ATSUC1, ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 1, SUC1, sucrose-proton symporter 1 -0.109 -0.000
109 265582_at AT2G20030 [RING/U-box superfamily protein] -0.109 0.068
110 262898_at AT1G59850 [ARM repeat superfamily protein] -0.109 0.001
111 252340_at AT3G48920 AtMYB45, myb domain protein 45, MYB45, myb domain protein 45 -0.107 0.002
112 258887_at AT3G05630 PDLZ2, PHOSPHOLIPASE D ZETA 2, PLDP2, phospholipase D P2, PLDZETA2, PHOSPHOLIPASE D ZETA 2 -0.107 0.094
113 252510_at AT3G46270 [receptor protein kinase-related] -0.106 -0.047
114 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] -0.106 -0.042
115 257690_at AT3G12830 SAUR72, SMALL AUXIN UPREGULATED 72 -0.105 -0.019
116 249169_at AT5G42880 unknown -0.103 0.008
117 257217_at AT3G14940 ATPPC3, phosphoenolpyruvate carboxylase 3, PPC3, phosphoenolpyruvate carboxylase 3 -0.103 0.007
118 258810_at AT3G03970 [ARM repeat superfamily protein] -0.102 0.070
119 252888_at AT4G39210 APL3 -0.102 0.007
120 254902_at AT4G11550 [Cysteine/Histidine-rich C1 domain family protein] -0.102 -0.001
121 245722_at AT1G73430 [sec34-like family protein] -0.101 -0.016
122 267164_at AT2G37700 [Fatty acid hydroxylase superfamily] -0.101 -0.011
123 260576_at AT2G47310 [flowering time control protein-related / FCA gamma-related] -0.100 0.054
124 258733_at AT3G05850 MUG7, MUSTANG 7 -0.099 -0.004
125 248008_at AT5G56270 ATWRKY2, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 2, WRKY2, WRKY DNA-binding protein 2 -0.098 -0.001
126 251617_at AT3G58000 [VQ motif-containing protein] -0.098 0.016
127 262776_at AT1G13020 EIF4B2, eukaryotic initiation factor 4B2 -0.098 0.002
128 265688_at AT2G24300 [Calmodulin-binding protein] -0.097 -0.027