4.0:Information of module
Control KNO3 roots - 8hours
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006644 phospholipid metabolic process BP 9.683e-07
GO:0008654 phospholipid biosynthetic process BP 1.517e-06
GO:0044711 single-organism biosynthetic process BP 1.905e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010118 stomatal movement BP 6.779e-03
GO:0035725 sodium ion transmembrane transport BP 8.211e-03
GO:0042446 hormone biosynthetic process BP 1.555e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Control KNO3 roots - 8hours		 Log2 signal ratio
Leafminer damaged seedlings
1 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.658 0.405
2 252882_at AT4G39675 unknown 0.555 0.080
3 250472_at AT5G10210 unknown 0.496 -0.029
4 245912_at AT5G19600 SULTR3;5, sulfate transporter 3;5 0.424 -0.011
5 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] 0.378 -0.425
6 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.370 -0.007
7 258629_at AT3G02850 SKOR, STELAR K+ outward rectifier 0.321 -0.216
8 253317_at AT4G33960 unknown 0.300 -0.001
9 246142_at AT5G19970 unknown 0.284 -0.183
10 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 0.282 -0.068
11 250597_at AT5G07680 ANAC079, Arabidopsis NAC domain containing protein 79, ANAC080, NAC domain containing protein 80, ATNAC4, NAC080, NAC domain containing protein 80, NAC4 0.276 0.071
12 263319_at AT2G47160 AtBOR1, BOR1, REQUIRES HIGH BORON 1 0.276 -0.453
13 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H 0.260 -0.414
14 249606_at AT5G37260 CIR1, CIRCADIAN 1, RVE2, REVEILLE 2 0.252 -0.561
15 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.236 -0.305
16 253049_at AT4G37300 MEE59, maternal effect embryo arrest 59 0.230 0.037
17 261684_at AT1G47400 unknown 0.217 -0.436
18 246238_at AT4G36670 AtPLT6, AtPMT6, PLT6, polyol transporter 6, PMT6, polyol/monosaccharide transporter 6 0.216 0.826
19 262231_at AT1G68740 PHO1;H1 0.214 -0.185
20 247443_at AT5G62720 [Integral membrane HPP family protein] 0.197 0.014
21 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 0.196 -0.183
22 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.193 0.016
23 259015_at AT3G07350 unknown 0.191 0.249
24 255479_at AT4G02380 AtLEA5, Arabidopsis thaliana late embryogenensis abundant like 5, SAG21, senescence-associated gene 21 0.190 0.505
25 245776_at AT1G30260 unknown 0.185 0.329
26 251154_at AT3G63110 ATIPT3, isopentenyltransferase 3, IPT3, isopentenyltransferase 3 0.184 -0.101
27 258437_at AT3G16560 [Protein phosphatase 2C family protein] 0.174 -0.012
28 247452_at AT5G62430 CDF1, cycling DOF factor 1 0.173 0.047
29 259996_at AT1G67910 unknown 0.173 -0.150
30 260059_at AT1G78090 ATTPPB, Arabidopsis thaliana trehalose-6-phosphate phosphatase B, TPPB, trehalose-6-phosphate phosphatase B 0.167 -0.178
31 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 0.167 0.339
32 251491_at AT3G59480 [pfkB-like carbohydrate kinase family protein] 0.165 0.058
33 249769_at AT5G24120 ATSIG5, SIGMA FACTOR 5, SIG5, SIGMA FACTOR 5, SIGE, sigma factor E 0.159 -0.152
34 255734_at AT1G25550 [myb-like transcription factor family protein] 0.157 0.103
35 249357_at AT5G40490 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.150 0.003
36 260877_at AT1G21500 unknown 0.149 -0.066
37 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related 0.143 0.261
38 261791_at AT1G16170 unknown 0.143 -0.070
39 259738_at AT1G64355 unknown 0.143 -0.170
40 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 0.143 0.767
41 254041_at AT4G25830 [Uncharacterised protein family (UPF0497)] 0.142 -0.394
42 250828_at AT5G05250 unknown 0.140 -0.367
43 245296_at AT4G16370 oligopeptide transporter 0.139 -0.333
44 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 0.135 -0.383
45 257831_at AT3G26710 CCB1, cofactor assembly of complex C 0.130 -0.186
46 246996_at AT5G67420 ASL39, ASYMMETRIC LEAVES2-LIKE 39, LBD37, LOB domain-containing protein 37 0.129 -0.019
47 262443_at AT1G47655 [Dof-type zinc finger DNA-binding family protein] 0.129 -0.026
48 249493_at AT5G39080 [HXXXD-type acyl-transferase family protein] 0.127 -0.353
49 256891_at AT3G19030 unknown 0.126 0.190
50 251665_at AT3G57040 ARR9, response regulator 9, ATRR4, RESPONSE REGULATOR 4 0.124 -0.348
51 247476_at AT5G62330 unknown 0.123 -0.068
52 254795_at AT4G12990 unknown 0.121 -0.041
53 248224_at AT5G53490 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.116 -0.088
54 253737_at AT4G28703 [RmlC-like cupins superfamily protein] 0.115 0.204
55 262168_at AT1G74730 unknown 0.115 -0.108
56 248050_at AT5G56100 [glycine-rich protein / oleosin] 0.114 -0.112
57 260393_at AT1G73920 [alpha/beta-Hydrolases superfamily protein] 0.114 0.129
58 253155_at AT4G35720 unknown 0.112 0.075
59 245229_at AT4G25620 [hydroxyproline-rich glycoprotein family protein] 0.111 -0.030
60 246713_at AT5G28210 [mRNA capping enzyme family protein] 0.111 -0.022
61 267003_at AT2G34340 unknown 0.110 -0.193
62 245354_at AT4G17600 LIL3:1 0.107 -0.163
63 265559_at AT2G05530 [Glycine-rich protein family] 0.106 0.043
64 250075_at AT5G17670 [alpha/beta-Hydrolases superfamily protein] 0.105 -0.198
65 247591_at AT5G60770 ATNRT2.4, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.4, NRT2.4, nitrate transporter 2.4 -0.728 -0.008
66 257143_at AT3G20110 CYP705A20, cytochrome P450, family 705, subfamily A, polypeptide 20 -0.349 0.014
67 255957_at AT1G22160 unknown -0.294 -0.196
68 248577_at AT5G49870 [Mannose-binding lectin superfamily protein] -0.257 -0.041
69 253408_at AT4G32950 [Protein phosphatase 2C family protein] -0.221 -0.106
70 264562_at AT1G55760 [BTB/POZ domain-containing protein] -0.186 -0.021
71 259454_at AT1G44050 [Cysteine/Histidine-rich C1 domain family protein] -0.172 -0.020
72 246912_at AT5G25820 [Exostosin family protein] -0.169 0.082
73 255648_at AT4G00910 [Aluminium activated malate transporter family protein] -0.167 -0.019
74 263330_at AT2G15320 [Leucine-rich repeat (LRR) family protein] -0.166 -0.138
75 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 -0.161 0.074
76 264324_at AT1G04160 ATXIB, ARABIDOPSIS THALIANA MYOSIN XI B, XI-8, MYOSIN XI-8, XI-B, MYOSIN XI B, XIB, myosin XI B -0.161 -0.115
77 263232_at AT1G05700 [Leucine-rich repeat transmembrane protein kinase protein] -0.158 0.032
78 247751_at AT5G59050 unknown -0.156 -0.032
79 247581_at AT5G61350 [Protein kinase superfamily protein] -0.156 -0.284
80 259888_at AT1G76350 NLP5, NIN-like protein 5 -0.153 -0.193
81 263136_at AT1G78580 ATTPS1, trehalose-6-phosphate synthase, TPS1, trehalose-6-phosphate synthase, TPS1, TREHALOSE-6-PHOSPHATE SYNTHASE 1 -0.151 -0.363
82 253088_at AT4G36220 CYP84A1, CYTOCHROME P450 84A1, FAH1, ferulic acid 5-hydroxylase 1 -0.151 0.092
83 259540_at AT1G20640 NLP4, NIN-like protein 4 -0.150 -0.176
84 256283_at AT3G12540 unknown -0.148 0.002
85 262275_at AT1G68710 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.145 -0.296
86 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] -0.145 -0.211
87 249955_at AT5G18840 [Major facilitator superfamily protein] -0.144 -0.053
88 255807_at AT4G10270 [Wound-responsive family protein] -0.137 0.039
89 267089_at AT2G38300 [myb-like HTH transcriptional regulator family protein] -0.135 -0.374
90 248990_at AT5G45210 [Disease resistance protein (TIR-NBS-LRR class) family] -0.134 0.035
91 256358_at AT1G66470 AtRHD6, RHD6, ROOT HAIR DEFECTIVE6 -0.133 -0.003
92 264621_at AT2G17700 STY8, serine/threonine/tyrosine kinase 8 -0.131 0.062
93 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 -0.131 -0.131
94 258663_at AT3G08670 unknown -0.131 -0.021
95 258143_at AT3G18170 [Glycosyltransferase family 61 protein] -0.131 0.216
96 251197_at AT3G62960 [Thioredoxin superfamily protein] -0.130 0.043
97 252046_at AT3G52460 [hydroxyproline-rich glycoprotein family protein] -0.128 -0.007
98 262972_at AT1G75620 [glyoxal oxidase-related protein] -0.125 -0.022
99 261581_at AT1G01140 CIPK9, CBL-interacting protein kinase 9, PKS6, PROTEIN KINASE 6, SnRK3.12, SNF1-RELATED PROTEIN KINASE 3.12 -0.125 0.123
100 246459_at AT5G16900 [Leucine-rich repeat protein kinase family protein] -0.123 -0.011
101 259557_at AT1G21210 WAK4, wall associated kinase 4 -0.121 0.005
102 253975_at AT4G26600 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.118 -0.165
103 245979_at AT5G13150 ATEXO70C1, exocyst subunit exo70 family protein C1, EXO70C1, exocyst subunit exo70 family protein C1 -0.116 0.079
104 263470_at AT2G31900 ATMYO5, MYOSIN 5, ATXIF, MYOSIN XI F, XIF, myosin-like protein XIF -0.113 -0.093
105 248006_at AT5G56250 HAP8, HAPLESS 8 -0.112 -0.080
106 256150_at AT1G55120 AtcwINV3, 6-fructan exohydrolase, ATFRUCT5, beta-fructofuranosidase 5, FRUCT5, beta-fructofuranosidase 5 -0.112 0.025
107 245604_at AT4G14290 [alpha/beta-Hydrolases superfamily protein] -0.110 -0.037
108 260143_at AT1G71880 ATSUC1, ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 1, SUC1, sucrose-proton symporter 1 -0.109 0.012
109 265582_at AT2G20030 [RING/U-box superfamily protein] -0.109 0.080
110 262898_at AT1G59850 [ARM repeat superfamily protein] -0.109 -0.184
111 252340_at AT3G48920 AtMYB45, myb domain protein 45, MYB45, myb domain protein 45 -0.107 0.061
112 258887_at AT3G05630 PDLZ2, PHOSPHOLIPASE D ZETA 2, PLDP2, phospholipase D P2, PLDZETA2, PHOSPHOLIPASE D ZETA 2 -0.107 -0.045
113 252510_at AT3G46270 [receptor protein kinase-related] -0.106 -0.003
114 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] -0.106 -0.313
115 257690_at AT3G12830 SAUR72, SMALL AUXIN UPREGULATED 72 -0.105 0.256
116 249169_at AT5G42880 unknown -0.103 -0.092
117 257217_at AT3G14940 ATPPC3, phosphoenolpyruvate carboxylase 3, PPC3, phosphoenolpyruvate carboxylase 3 -0.103 -0.212
118 258810_at AT3G03970 [ARM repeat superfamily protein] -0.102 -0.015
119 252888_at AT4G39210 APL3 -0.102 -0.222
120 254902_at AT4G11550 [Cysteine/Histidine-rich C1 domain family protein] -0.102 -0.107
121 245722_at AT1G73430 [sec34-like family protein] -0.101 -0.105
122 267164_at AT2G37700 [Fatty acid hydroxylase superfamily] -0.101 0.051
123 260576_at AT2G47310 [flowering time control protein-related / FCA gamma-related] -0.100 -0.021
124 258733_at AT3G05850 MUG7, MUSTANG 7 -0.099 -0.124
125 248008_at AT5G56270 ATWRKY2, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 2, WRKY2, WRKY DNA-binding protein 2 -0.098 0.055
126 251617_at AT3G58000 [VQ motif-containing protein] -0.098 -0.085
127 262776_at AT1G13020 EIF4B2, eukaryotic initiation factor 4B2 -0.098 -0.033
128 265688_at AT2G24300 [Calmodulin-binding protein] -0.097 -0.066