4.0:Information of module
nhx6
In comparison with xyl-grown cell culture- 1h 1mM Suc help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006096 glycolytic process BP 1.050e-10
GO:0044724 single-organism carbohydrate catabolic p... BP 1.171e-10
GO:0016052 carbohydrate catabolic process BP 2.248e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010224 response to UV-B BP 1.595e-09
GO:0080167 response to karrikin BP 3.923e-08
GO:0009813 flavonoid biosynthetic process BP 2.403e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nhx6		 Log2 signal ratio
xyl-grown cell culture- 1h 1mM Suc
1 259793_at AT1G64380 [Integrase-type DNA-binding superfamily protein] 0.278 0.033
2 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 0.257 -0.049
3 247216_at AT5G64860 DPE1, disproportionating enzyme 0.243 0.022
4 265828_at AT2G14520 unknown 0.241 -0.033
5 261247_at AT1G20070 unknown 0.241 0.088
6 263221_at AT1G30620 HSR8, HIGH SUGAR RESPONSE8, MUR4, MURUS 4, UXE1, UDP-D-XYLOSE 4-EPIMERASE 1 0.232 0.004
7 260753_at AT1G49230 AtATL78, ATL78, Arabidopsis T?xicos en Levadura 78 0.224 -0.036
8 247191_at AT5G65310 ATHB-5, ATHB5, homeobox protein 5, HB5, homeobox protein 5 0.219 0.064
9 265658_at AT2G13810 ALD1, AGD2-like defense response protein 1, AtALD1, EDTS5, eds two suppressor 5 0.213 0.015
10 251919_at AT3G53800 Fes1B, Fes1B 0.213 0.064
11 252179_at AT3G50760 GATL2, galacturonosyltransferase-like 2 0.191 0.057
12 253617_at AT4G30410 [sequence-specific DNA binding transcription factors] 0.173 -0.050
13 261157_at AT1G34510 [Peroxidase superfamily protein] 0.169 0.027
14 251078_at AT5G01990 [Auxin efflux carrier family protein] 0.169 -0.014
15 255673_at AT4G00340 RLK4, receptor-like protein kinase 4 0.167 0.024
16 254884_at AT4G11730 [Cation transporter/ E1-E2 ATPase family protein] 0.167 0.013
17 258151_at AT3G18080 BGLU44, B-S glucosidase 44 0.165 -0.069
18 255825_at AT2G40475 ASG8, ALTERED SEED GERMINATION 8 0.161 0.046
19 263118_at AT1G03090 MCCA 0.160 -0.046
20 261580_at AT1G01110 IQD18, IQ-domain 18 0.154 0.029
21 256177_at AT1G51620 [Protein kinase superfamily protein] 0.153 0.095
22 252639_at AT3G44550 FAR5, fatty acid reductase 5 0.148 0.014
23 253850_at AT4G28090 sks10, SKU5 similar 10 0.148 0.000
24 247919_at AT5G57650 [eukaryotic translation initiation factor-related] 0.147 -0.009
25 260833_at AT1G06800 DALL4, DAD1-Like Lipase 4, PLA-I{gamma}1, phospholipase A I gamma 1 0.144 -0.011
26 260279_at AT1G80420 ATXRCC1, XRCC1, homolog of X-ray repair cross complementing 1 0.140 0.019
27 259027_at AT3G09280 unknown 0.137 0.007
28 246585_at AT5G14750 ATMYB66, myb domain protein 66, MYB66, myb domain protein 66, WER, WEREWOLF, WER1, WEREWOLF 1 0.135 0.020
29 262309_at AT1G70820 [phosphoglucomutase, putative / glucose phosphomutase, putative] 0.134 0.035
30 245947_at AT5G19530 ACL5, ACAULIS 5 0.133 -0.030
31 262504_at AT1G21750 ATPDI5, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 5, ATPDIL1-1, PDI-like 1-1, PDI5, PROTEIN DISULFIDE ISOMERASE 5, PDIL1-1, PDI-like 1-1 0.132 -0.003
32 249856_at AT5G22980 scpl47, serine carboxypeptidase-like 47 0.132 -0.022
33 249278_at AT5G41900 [alpha/beta-Hydrolases superfamily protein] 0.131 0.013
34 263359_at AT2G15230 ATLIP1, lipase 1, LIP1, lipase 1 0.130 -0.020
35 257639_at AT3G25720 [RNA-directed DNA polymerase (reverse transcriptase)-related family protein] 0.129 -0.023
36 247208_at AT5G64870 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.128 0.036
37 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 0.127 -0.037
38 266229_at AT2G28840 XBAT31, XB3 ortholog 1 in Arabidopsis thaliana 0.127 -0.015
39 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 0.126 0.008
40 255232_at AT4G05330 AGD13, ARF-GAP domain 13 0.124 -0.003
41 252120_at AT3G51130 unknown 0.124 -0.008
42 264858_at AT1G24190 ATSIN3, ARABIDOPSIS THALIANA SIN3 HOMOLOG, SIN3, ARABIDOPSIS THALIANA SIN3 HOMOLOG, SNL3, SIN3-like 3 0.123 -0.064
43 253180_at AT4G35210 unknown 0.123 -0.017
44 267590_at AT2G39700 ATEXP4, ATEXPA4, expansin A4, ATHEXP ALPHA 1.6, EXPA4, expansin A4 0.118 -0.018
45 257032_at AT3G19140 DNF, DAY NEUTRAL FLOWERING 0.114 -0.012
46 245742_at AT1G44170 ALDH3H1, aldehyde dehydrogenase 3H1, ALDH4, aldehyde dehydrogenase 4 0.114 0.006
47 256249_at AT3G11270 MEE34, maternal effect embryo arrest 34 0.114 0.009
48 248695_at AT5G48350 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] 0.113 -0.003
49 245670_at AT1G28210 ATJ1 0.112 -0.014
50 264975_at AT1G27070 5'-AMP-activated protein kinase-related 0.112 -0.021
51 261806_at AT1G30510 ATRFNR2, root FNR 2, RFNR2, root FNR 2 0.110 0.024
52 261921_at AT1G65900 unknown 0.109 -0.063
53 258698_at AT3G09690 [alpha/beta-Hydrolases superfamily protein] 0.109 -0.064
54 264006_at AT2G22430 ATHB6, homeobox protein 6, HB6, homeobox protein 6 0.108 0.012
55 249435_at AT5G39970 [catalytics] 0.108 -0.014
56 267045_at AT2G34180 ATWL2, WPL4-LIKE 2, CIPK13, CBL-interacting protein kinase 13, SnRK3.7, SNF1-RELATED PROTEIN KINASE 3.7, WL2, WPL4-LIKE 2 0.107 0.053
57 254118_at AT4G24790 [AAA-type ATPase family protein] 0.106 0.009
58 261026_at AT1G01240 unknown 0.104 0.015
59 249799_at AT5G23670 LCB2, long chain base2 0.104 -0.022
60 255455_at AT4G02930 [GTP binding Elongation factor Tu family protein] 0.102 -0.003
61 261398_at AT1G79610 ATNHX6, ARABIDOPSIS NA+/H+ ANTIPORTER 6, NHX6, Na+/H+ antiporter 6 -0.398 0.007
62 258370_at AT3G14395 unknown -0.301 0.069
63 246200_at AT4G37240 unknown -0.299 0.052
64 247878_at AT5G57760 unknown -0.293 0.042
65 259325_at AT3G05320 [O-fucosyltransferase family protein] -0.290 0.015
66 261907_at AT1G65060 4CL3, 4-coumarate:CoA ligase 3 -0.261 0.073
67 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.249 0.046
68 261866_at AT1G50420 SCL-3, SCARECROW-LIKE 3, SCL3, scarecrow-like 3 -0.238 -0.015
69 247779_at AT5G58760 DDB2, damaged DNA binding 2 -0.231 -0.025
70 250528_at AT5G08600 [U3 ribonucleoprotein (Utp) family protein] -0.214 0.000
71 250481_at AT5G10310 unknown -0.211 0.074
72 250413_at AT5G11160 APT5, adenine phosphoribosyltransferase 5 -0.203 0.034
73 253848_at AT4G28020 unknown -0.203 0.001
74 245816_at AT1G26210 ATSOFL1, SOB FIVE-LIKE 1, SOFL1, SOB five-like 1 -0.202 0.053
75 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like -0.202 0.022
76 252672_at AT3G44230 unknown -0.201 0.056
77 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.197 -0.308
78 258349_at AT3G17609 HYH, HY5-homolog -0.196 0.044
79 252123_at AT3G51240 F3'H, F3H, flavanone 3-hydroxylase, TT6, TRANSPARENT TESTA 6 -0.196 0.055
80 261350_at AT1G79770 unknown -0.193 0.024
81 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 -0.181 -0.068
82 258529_at AT3G06740 GATA15, GATA transcription factor 15 -0.179 0.041
83 267013_at AT2G39180 ATCRR2, CCR2, CRINKLY4 related 2 -0.179 0.043
84 264901_at AT1G23090 AST91, sulfate transporter 91, SULTR3;3 -0.177 0.002
85 248429_at AT5G51770 [Protein kinase superfamily protein] -0.177 -0.005
86 257704_at AT3G12720 ATMYB67, myb domain protein 67, ATY53, MYB67, MYB67, myb domain protein 67 -0.177 -0.015
87 250007_at AT5G18670 BAM9, BETA-AMYLASE 9, BMY3, beta-amylase 3 -0.175 -0.311
88 264818_at AT1G03530 ATNAF1, NAF1, nuclear assembly factor 1 -0.175 -0.061
89 258818_at AT3G04580 EIN4, ETHYLENE INSENSITIVE 4 -0.173 -0.036
90 256222_at AT1G56210 [Heavy metal transport/detoxification superfamily protein ] -0.173 -0.076
91 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 -0.172 0.013
92 245566_at AT4G14610 [pseudogene] -0.171 -0.002
93 250777_at AT5G05440 PYL5, PYRABACTIN RESISTANCE 1-LIKE 5, RCAR8, regulatory component of ABA receptor 8 -0.170 0.002
94 247461_at AT5G62100 ATBAG2, BCL-2-associated athanogene 2, BAG2, BCL-2-associated athanogene 2 -0.167 -0.014
95 267382_at AT2G44300 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.166 0.008
96 264637_at AT1G65560 [Zinc-binding dehydrogenase family protein] -0.166 0.009
97 249011_at AT5G44670 GALS2, galactan synthase 2 -0.166 0.036
98 254487_at AT4G20780 CML42, calmodulin like 42 -0.163 0.076
99 252358_at AT3G48425 [DNAse I-like superfamily protein] -0.158 -0.000
100 264947_at AT1G77020 [DNAJ heat shock N-terminal domain-containing protein] -0.157 0.009
101 258537_at AT3G04210 [Disease resistance protein (TIR-NBS class)] -0.156 0.035
102 252916_at AT4G38950 [ATP binding microtubule motor family protein] -0.155 -0.019
103 250099_at AT5G17300 RVE1, REVEILLE 1 -0.155 -0.147
104 260522_x_at AT2G41730 unknown -0.154 0.033
105 245634_at AT1G25270 UMAMIT24, Usually multiple acids move in and out Transporters 24 -0.154 -0.033
106 266760_at AT2G46870 NGA1, NGATHA1 -0.153 0.027
107 252456_at AT3G47170 [HXXXD-type acyl-transferase family protein] -0.153 0.086
108 259149_at AT3G10340 PAL4, phenylalanine ammonia-lyase 4 -0.151 0.053
109 255275_at AT4G05310 [Ubiquitin-like superfamily protein] -0.151 -0.039
110 251827_at AT3G55120 A11, AtCHI, CFI, CHALCONE FLAVANONE ISOMERASE, CHI, chalcone isomerase, TT5, TRANSPARENT TESTA 5 -0.149 0.067
111 246034_at AT5G08350 [GRAM domain-containing protein / ABA-responsive protein-related] -0.148 -0.105
112 261914_at AT1G65870 [Disease resistance-responsive (dirigent-like protein) family protein] -0.148 0.137
113 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 -0.147 0.035
114 266946_at AT2G18890 [Protein kinase superfamily protein] -0.147 -0.009
115 252004_at AT3G52780 ATPAP20, PAP20 -0.146 0.022
116 260593_at AT1G55870 AHG2, ABA-HYPERSENSITIVE GERMINATION 2, ATPARN, ARABIDOPSIS THALIANA POLY(A) RIBONUCLEASE -0.146 0.041
117 264624_at AT1G08930 ERD6, EARLY RESPONSE TO DEHYDRATION 6 -0.146 0.031
118 266782_at AT2G29120 ATGLR2.7, glutamate receptor 2.7, GLR2.7, GLUTAMATE RECEPTOR 2.7, GLR2.7, glutamate receptor 2.7 -0.145 -0.024
119 246516_at AT5G15740 [O-fucosyltransferase family protein] -0.145 0.014