4.0:Information of module
L2.5 mutant
In comparison with Shoot P recovery help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010207 photosystem II assembly BP 1.768e-03
GO:0009247 glycolipid biosynthetic process BP 2.675e-03
GO:0009860 pollen tube growth BP 3.027e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048509 regulation of meristem development BP 3.671e-04
GO:0007062 sister chromatid cohesion BP 4.328e-04
GO:0010075 regulation of meristem growth BP 6.016e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
L2.5 mutant		 Log2 signal ratio
Shoot P recovery
1 248178_at AT5G54370 [Late embryogenesis abundant (LEA) protein-related] 0.365 -0.028
2 265050_at AT1G52070 [Mannose-binding lectin superfamily protein] 0.251 -0.018
3 247605_at AT5G60970 TCP5, TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.244 -0.077
4 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 0.234 -0.211
5 262369_at AT1G73010 AtPPsPase1, pyrophosphate-specific phosphatase1, ATPS2, phosphate starvation-induced gene 2, PPsPase1, pyrophosphate-specific phosphatase1, PS2, phosphate starvation-induced gene 2 0.221 -1.077
6 266154_at AT2G12190 [Cytochrome P450 superfamily protein] 0.219 -0.174
7 264514_at AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] 0.218 -0.009
8 267271_at AT2G02540 ATHB21, homeobox protein 21, HB21, homeobox protein 21, ZFHD4, ZINC FINGER HOMEODOMAIN 4, ZHD3, ZINC FINGER HOMEODOMAIN 3 0.214 -0.145
9 252073_at AT3G51750 unknown 0.201 -0.102
10 263115_at AT1G03055 AtD27, A. thaliana homolog of rice D27, D27, DWARF27 0.187 -0.131
11 250161_at AT5G15240 [Transmembrane amino acid transporter family protein] 0.176 0.146
12 249518_at AT5G38610 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.165 0.013
13 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 0.159 -0.043
14 255023_at AT4G09850 unknown 0.158 -0.004
15 254173_at AT4G24580 REN1, ROP1 ENHANCER 1 0.157 0.010
16 254482_at AT4G20370 TSF, TWIN SISTER OF FT 0.152 -0.035
17 248394_at AT5G52070 [Agenet domain-containing protein] 0.151 0.036
18 245245_at AT1G44318 hemb2 0.150 0.006
19 250574_at AT5G08230 [Tudor/PWWP/MBT domain-containing protein] 0.148 0.001
20 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 -0.471 -0.036
21 245049_at ATCG00050 RPS16, ribosomal protein S16 -0.241 0.041
22 263605_at AT2G16485 NERD, Needed for RDR2-independent DNA methylation -0.238 0.022
23 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.235 0.018
24 250798_at AT5G05340 PRX52, peroxidase 52 -0.206 0.020
25 250245_at AT5G13690 CYL1, CYCLOPS 1, NAGLU, N-ACETYL-GLUCOSAMINIDASE -0.172 0.077
26 248599_at AT5G49380 unknown -0.149 0.081
27 262829_at AT1G14970 [O-fucosyltransferase family protein] -0.145 -0.071
28 264948_at AT1G77030 [hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides] -0.141 0.044
29 248704_at AT5G48450 sks3, SKU5 similar 3 -0.135 0.049
30 245156_at AT5G12480 CPK7, calmodulin-domain protein kinase 7 -0.134 0.104
31 266360_at AT2G32250 FRS2, FAR1-related sequence 2 -0.129 0.074
32 252431_at AT3G47700 MAG2, maigo2 -0.119 0.102
33 246765_at AT5G27330 [Prefoldin chaperone subunit family protein] -0.117 0.055
34 253432_at AT4G32450 MEF8S, MEF8 similar -0.115 -0.037
35 248744_at AT5G48250 BBX8, B-box domain protein 8 -0.113 -0.008
36 260658_at AT1G19410 [FBD / Leucine Rich Repeat domains containing protein] -0.108 -0.034
37 258781_at AT3G11740 unknown -0.105 0.046