4.0:Information of module
nas4x roots + Fe
In comparison with Light 0.5h polysome-bound help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1990267 response to transition metal nanoparticl... BP 2.680e-08
GO:0071577 zinc II ion transmembrane transport BP 8.292e-08
GO:0000041 transition metal ion transport BP 1.526e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042793 transcription from plastid promoter BP 1.588e-03
GO:0048229 gametophyte development BP 3.166e-03
GO:2000242 negative regulation of reproductive proc... BP 3.348e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nas4x roots + Fe		 Log2 signal ratio
Light 0.5h polysome-bound
1 245692_at AT5G04150 BHLH101 0.878 0.007
2 254534_at AT4G19680 ATIRT2, IRON REGULATED TRANSPORTER 2, IRT2, iron regulated transporter 2 0.644 -0.022
3 261684_at AT1G47400 unknown 0.627 0.034
4 262373_at AT1G73120 unknown 0.584 0.057
5 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.463 0.014
6 260926_at AT1G21360 GLTP2, glycolipid transfer protein 2 0.455 -0.078
7 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 0.455 0.046
8 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.427 0.012
9 245296_at AT4G16370 oligopeptide transporter 0.415 -0.049
10 251620_at AT3G58060 [Cation efflux family protein] 0.413 -0.065
11 255940_at AT1G20380 [Prolyl oligopeptidase family protein] 0.405 0.029
12 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 0.377 -0.017
13 267266_at AT2G23150 ATNRAMP3, NRAMP3, natural resistance-associated macrophage protein 3 0.364 0.026
14 260462_at AT1G10970 ATZIP4, ZIP4, zinc transporter 4 precursor 0.324 0.006
15 247109_at AT5G65870 ATPSK5, phytosulfokine 5 precursor, PSK5, PSK5, phytosulfokine 5 precursor 0.321 -0.024
16 257823_at AT3G25190 [Vacuolar iron transporter (VIT) family protein] 0.309 0.013
17 257421_at AT1G12030 unknown 0.308 -0.049
18 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 0.305 -0.021
19 265582_at AT2G20030 [RING/U-box superfamily protein] 0.291 -0.024
20 259286_at AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0.291 0.082
21 258646_at AT3G08040 ATFRD3, FRD3, FERRIC REDUCTASE DEFECTIVE 3, MAN1, MANGANESE ACCUMULATOR 1 0.290 -0.013
22 259228_at AT3G07720 [Galactose oxidase/kelch repeat superfamily protein] 0.283 0.024
23 253413_at AT4G33020 ATZIP9, ZIP9 0.266 0.031
24 267572_at AT2G30660 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] 0.257 0.033
25 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 0.240 -0.009
26 254976_at AT4G10510 [Subtilase family protein] 0.234 0.004
27 252510_at AT3G46270 [receptor protein kinase-related] 0.234 -0.007
28 257715_at AT3G12750 AtZIP1, ZIP1, zinc transporter 1 precursor 0.227 -0.051
29 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.223 0.016
30 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.217 0.008
31 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 0.198 0.020
32 248049_at AT5G56090 COX15, cytochrome c oxidase 15 0.194 -0.026
33 246405_at AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.183 -0.060
34 266033_at AT2G05830 MTI1, 5-METHYLTHIORIBOSE KINASE 1 0.182 -0.018
35 250747_at AT5G05900 [UDP-Glycosyltransferase superfamily protein] 0.178 -0.055
36 254077_at AT4G25640 ATDTX35, detoxifying efflux carrier 35, DTX35, detoxifying efflux carrier 35, FFT, FLOWER FLAVONOID TRANSPORTER 0.168 0.002
37 259723_at AT1G60960 ATIRT3, IRON REGULATED TRANSPORTER 3, IRT3, iron regulated transporter 3 0.167 0.014
38 255075_at AT4G09110 [RING/U-box superfamily protein] 0.162 0.023
39 264720_at AT1G70080 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.162 -0.018
40 251125_at AT5G01060 BSK10, brassinosteroid-signaling kinase 10 0.159 -0.058
41 263411_at AT2G28710 [C2H2-type zinc finger family protein] 0.159 0.015
42 249295_at AT5G41280 [Receptor-like protein kinase-related family protein] 0.158 0.009
43 251942_at AT3G53480 ABCG37, ATP-binding cassette G37, ATPDR9, PLEIOTROPIC DRUG RESISTANCE 9, PDR9, pleiotropic drug resistance 9, PIS1, polar auxin transport inhibitor sensitive 1 0.158 0.073
44 261448_at AT1G21140 [Vacuolar iron transporter (VIT) family protein] 0.158 0.026
45 254391_at AT4G21590 ENDO3, endonuclease 3 0.156 0.004
46 257670_at AT3G20340 unknown 0.149 -0.062
47 249636_at AT5G36890 BGLU42, beta glucosidase 42 0.146 -0.027
48 262232_at AT1G68600 [Aluminium activated malate transporter family protein] 0.142 -0.005
49 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.867 0.116
50 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 -0.821 0.058
51 252300_at AT3G49160 [pyruvate kinase family protein] -0.267 0.012
52 254066_at AT4G25480 ATCBF3, CBF3, C-REPEAT BINDING FACTOR 3, DREB1A, dehydration response element B1A -0.264 0.567
53 248347_at AT5G52250 EFO1, EARLY FLOWERING BY OVEREXPRESSION 1, RUP1, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 -0.222 0.225
54 256245_at AT3G12580 ATHSP70, ARABIDOPSIS HEAT SHOCK PROTEIN 70, HSP70, heat shock protein 70 -0.192 0.269
55 265983_at AT2G18550 ATHB21, homeobox protein 21, HB-2, homeobox-2, HB21, homeobox protein 21 -0.186 0.031
56 249482_at AT5G38980 unknown -0.183 -0.136
57 263668_at AT1G04350 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.163 0.035
58 256416_at AT3G11050 ATFER2, ferritin 2, FER2, ferritin 2 -0.161 -0.006
59 266209_at AT2G27550 ATC, centroradialis -0.158 0.007
60 253040_at AT4G37800 XTH7, xyloglucan endotransglucosylase/hydrolase 7 -0.147 -0.029
61 254795_at AT4G12990 unknown -0.125 0.042
62 250045_at AT5G17700 [MATE efflux family protein] -0.124 -0.034
63 264363_at AT1G03170 FAF2, FANTASTIC FOUR 2, FTM5, FLORAL TRANSITION AT THE MERISTEM5 -0.124 -0.044
64 245049_at ATCG00050 RPS16, ribosomal protein S16 -0.124 -0.033
65 267054_at AT2G38370 unknown -0.122 0.032
66 263831_at AT2G40300 ATFER4, ferritin 4, FER4, ferritin 4 -0.121 -0.021
67 251132_at AT5G01200 [Duplicated homeodomain-like superfamily protein] -0.121 -0.039
68 261522_at AT1G71710 [DNAse I-like superfamily protein] -0.115 0.011
69 256069_at AT1G13740 AFP2, ABI five binding protein 2 -0.115 0.128
70 266816_at AT2G44970 [alpha/beta-Hydrolases superfamily protein] -0.110 0.021
71 249035_at AT5G44190 ATGLK2, GLK2, GOLDEN2-like 2, GPRI2, GBF'S PRO-RICH REGION-INTERACTING FACTOR 2 -0.109 0.336
72 260877_at AT1G21500 unknown -0.103 0.056
73 262464_at AT1G50280 [Phototropic-responsive NPH3 family protein] -0.100 -0.055
74 257920_at AT3G23260 [F-box and associated interaction domains-containing protein] -0.099 -0.008
75 263556_at AT2G16365 [F-box family protein] -0.099 0.118
76 257723_at AT3G18500 [DNAse I-like superfamily protein] -0.096 -0.024
77 257106_at AT3G29060 [EXS (ERD1/XPR1/SYG1) family protein] -0.095 0.047
78 260073_at AT1G73660 SIS8, SUGAR INSENSITIVE 8 -0.094 0.017
79 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] -0.094 0.060
80 251215_at AT3G62510 [protein disulfide isomerase-related] -0.094 0.013
81 253614_at AT4G30350 SMXL2, SMAX1-like 2 -0.094 -0.034
82 252368_at AT3G48520 CYP94B3, cytochrome P450, family 94, subfamily B, polypeptide 3 -0.094 0.066
83 248723_at AT5G47950 [HXXXD-type acyl-transferase family protein] -0.093 0.039
84 250646_at AT5G06720 ATPA2, peroxidase 2, AtPRX53, PA2, peroxidase 2, PRX53, peroxidase 53 -0.092 -0.066
85 263078_at AT2G05350 unknown -0.092 0.061
86 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) -0.092 0.080
87 250882_at AT5G04000 unknown -0.091 0.093
88 259084_at AT3G04800 ATTIM23-3, translocase inner membrane subunit 23-3, TIM23-3, translocase inner membrane subunit 23-3 -0.090 0.014
89 252168_at AT3G50440 ATMES10, ARABIDOPSIS THALIANA METHYL ESTERASE 10, MES10, methyl esterase 10 -0.089 -0.028
90 250750_at AT5G05870 UGT76C1, UDP-glucosyl transferase 76C1 -0.088 0.019
91 254137_at AT4G24930 [thylakoid lumenal 17.9 kDa protein, chloroplast] -0.088 -0.009
92 266886_at AT2G44745 AtWRKY12, WRKY12, WRKY DNA-binding protein 12 -0.088 -0.059
93 266369_at AT2G41370 BOP2, BLADE ON PETIOLE2 -0.087 0.001
94 262941_at AT1G79490 EMB2217, embryo defective 2217 -0.086 0.012
95 262701_at AT1G16480 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.085 0.055