4.0:Information of module
nas4x roots + Fe
In comparison with bbx24 in Simulated Shade help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1990267 response to transition metal nanoparticl... BP 2.680e-08
GO:0071577 zinc II ion transmembrane transport BP 8.292e-08
GO:0000041 transition metal ion transport BP 1.526e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042793 transcription from plastid promoter BP 1.588e-03
GO:0048229 gametophyte development BP 3.166e-03
GO:2000242 negative regulation of reproductive proc... BP 3.348e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nas4x roots + Fe		 Log2 signal ratio
bbx24 in Simulated Shade
1 245692_at AT5G04150 BHLH101 0.878 0.071
2 254534_at AT4G19680 ATIRT2, IRON REGULATED TRANSPORTER 2, IRT2, iron regulated transporter 2 0.644 0.335
3 261684_at AT1G47400 unknown 0.627 0.009
4 262373_at AT1G73120 unknown 0.584 0.045
5 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.463 -0.136
6 260926_at AT1G21360 GLTP2, glycolipid transfer protein 2 0.455 0.134
7 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 0.455 -0.062
8 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.427 0.021
9 245296_at AT4G16370 oligopeptide transporter 0.415 -0.014
10 251620_at AT3G58060 [Cation efflux family protein] 0.413 -0.048
11 255940_at AT1G20380 [Prolyl oligopeptidase family protein] 0.405 -0.012
12 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 0.377 -0.028
13 267266_at AT2G23150 ATNRAMP3, NRAMP3, natural resistance-associated macrophage protein 3 0.364 -0.040
14 260462_at AT1G10970 ATZIP4, ZIP4, zinc transporter 4 precursor 0.324 0.036
15 247109_at AT5G65870 ATPSK5, phytosulfokine 5 precursor, PSK5, PSK5, phytosulfokine 5 precursor 0.321 0.028
16 257823_at AT3G25190 [Vacuolar iron transporter (VIT) family protein] 0.309 -0.005
17 257421_at AT1G12030 unknown 0.308 -0.059
18 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 0.305 0.070
19 265582_at AT2G20030 [RING/U-box superfamily protein] 0.291 0.134
20 259286_at AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0.291 -0.033
21 258646_at AT3G08040 ATFRD3, FRD3, FERRIC REDUCTASE DEFECTIVE 3, MAN1, MANGANESE ACCUMULATOR 1 0.290 0.035
22 259228_at AT3G07720 [Galactose oxidase/kelch repeat superfamily protein] 0.283 0.027
23 253413_at AT4G33020 ATZIP9, ZIP9 0.266 0.038
24 267572_at AT2G30660 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] 0.257 0.023
25 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 0.240 0.023
26 254976_at AT4G10510 [Subtilase family protein] 0.234 -0.120
27 252510_at AT3G46270 [receptor protein kinase-related] 0.234 0.047
28 257715_at AT3G12750 AtZIP1, ZIP1, zinc transporter 1 precursor 0.227 -0.023
29 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.223 0.045
30 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.217 -0.043
31 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 0.198 -0.277
32 248049_at AT5G56090 COX15, cytochrome c oxidase 15 0.194 0.025
33 246405_at AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.183 -0.257
34 266033_at AT2G05830 MTI1, 5-METHYLTHIORIBOSE KINASE 1 0.182 0.038
35 250747_at AT5G05900 [UDP-Glycosyltransferase superfamily protein] 0.178 0.065
36 254077_at AT4G25640 ATDTX35, detoxifying efflux carrier 35, DTX35, detoxifying efflux carrier 35, FFT, FLOWER FLAVONOID TRANSPORTER 0.168 0.019
37 259723_at AT1G60960 ATIRT3, IRON REGULATED TRANSPORTER 3, IRT3, iron regulated transporter 3 0.167 0.032
38 255075_at AT4G09110 [RING/U-box superfamily protein] 0.162 0.038
39 264720_at AT1G70080 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.162 -0.014
40 251125_at AT5G01060 BSK10, brassinosteroid-signaling kinase 10 0.159 0.046
41 263411_at AT2G28710 [C2H2-type zinc finger family protein] 0.159 0.094
42 249295_at AT5G41280 [Receptor-like protein kinase-related family protein] 0.158 0.016
43 251942_at AT3G53480 ABCG37, ATP-binding cassette G37, ATPDR9, PLEIOTROPIC DRUG RESISTANCE 9, PDR9, pleiotropic drug resistance 9, PIS1, polar auxin transport inhibitor sensitive 1 0.158 0.023
44 261448_at AT1G21140 [Vacuolar iron transporter (VIT) family protein] 0.158 0.070
45 254391_at AT4G21590 ENDO3, endonuclease 3 0.156 0.044
46 257670_at AT3G20340 unknown 0.149 0.052
47 249636_at AT5G36890 BGLU42, beta glucosidase 42 0.146 -0.013
48 262232_at AT1G68600 [Aluminium activated malate transporter family protein] 0.142 -0.183
49 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.867 -0.100
50 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 -0.821 0.039
51 252300_at AT3G49160 [pyruvate kinase family protein] -0.267 -0.018
52 254066_at AT4G25480 ATCBF3, CBF3, C-REPEAT BINDING FACTOR 3, DREB1A, dehydration response element B1A -0.264 0.023
53 248347_at AT5G52250 EFO1, EARLY FLOWERING BY OVEREXPRESSION 1, RUP1, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 -0.222 0.091
54 256245_at AT3G12580 ATHSP70, ARABIDOPSIS HEAT SHOCK PROTEIN 70, HSP70, heat shock protein 70 -0.192 -0.198
55 265983_at AT2G18550 ATHB21, homeobox protein 21, HB-2, homeobox-2, HB21, homeobox protein 21 -0.186 0.047
56 249482_at AT5G38980 unknown -0.183 -0.021
57 263668_at AT1G04350 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.163 -0.011
58 256416_at AT3G11050 ATFER2, ferritin 2, FER2, ferritin 2 -0.161 -0.031
59 266209_at AT2G27550 ATC, centroradialis -0.158 -0.134
60 253040_at AT4G37800 XTH7, xyloglucan endotransglucosylase/hydrolase 7 -0.147 0.015
61 254795_at AT4G12990 unknown -0.125 0.012
62 250045_at AT5G17700 [MATE efflux family protein] -0.124 -0.036
63 264363_at AT1G03170 FAF2, FANTASTIC FOUR 2, FTM5, FLORAL TRANSITION AT THE MERISTEM5 -0.124 0.002
64 245049_at ATCG00050 RPS16, ribosomal protein S16 -0.124 -0.106
65 267054_at AT2G38370 unknown -0.122 -0.009
66 263831_at AT2G40300 ATFER4, ferritin 4, FER4, ferritin 4 -0.121 -0.015
67 251132_at AT5G01200 [Duplicated homeodomain-like superfamily protein] -0.121 -0.042
68 261522_at AT1G71710 [DNAse I-like superfamily protein] -0.115 -0.046
69 256069_at AT1G13740 AFP2, ABI five binding protein 2 -0.115 0.019
70 266816_at AT2G44970 [alpha/beta-Hydrolases superfamily protein] -0.110 -0.038
71 249035_at AT5G44190 ATGLK2, GLK2, GOLDEN2-like 2, GPRI2, GBF'S PRO-RICH REGION-INTERACTING FACTOR 2 -0.109 0.035
72 260877_at AT1G21500 unknown -0.103 -0.007
73 262464_at AT1G50280 [Phototropic-responsive NPH3 family protein] -0.100 0.032
74 257920_at AT3G23260 [F-box and associated interaction domains-containing protein] -0.099 -0.013
75 263556_at AT2G16365 [F-box family protein] -0.099 0.008
76 257723_at AT3G18500 [DNAse I-like superfamily protein] -0.096 0.023
77 257106_at AT3G29060 [EXS (ERD1/XPR1/SYG1) family protein] -0.095 -0.002
78 260073_at AT1G73660 SIS8, SUGAR INSENSITIVE 8 -0.094 0.013
79 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] -0.094 0.086
80 251215_at AT3G62510 [protein disulfide isomerase-related] -0.094 0.009
81 253614_at AT4G30350 SMXL2, SMAX1-like 2 -0.094 0.053
82 252368_at AT3G48520 CYP94B3, cytochrome P450, family 94, subfamily B, polypeptide 3 -0.094 0.022
83 248723_at AT5G47950 [HXXXD-type acyl-transferase family protein] -0.093 0.077
84 250646_at AT5G06720 ATPA2, peroxidase 2, AtPRX53, PA2, peroxidase 2, PRX53, peroxidase 53 -0.092 -0.142
85 263078_at AT2G05350 unknown -0.092 -0.009
86 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) -0.092 -0.065
87 250882_at AT5G04000 unknown -0.091 -0.048
88 259084_at AT3G04800 ATTIM23-3, translocase inner membrane subunit 23-3, TIM23-3, translocase inner membrane subunit 23-3 -0.090 0.037
89 252168_at AT3G50440 ATMES10, ARABIDOPSIS THALIANA METHYL ESTERASE 10, MES10, methyl esterase 10 -0.089 -0.079
90 250750_at AT5G05870 UGT76C1, UDP-glucosyl transferase 76C1 -0.088 -0.029
91 254137_at AT4G24930 [thylakoid lumenal 17.9 kDa protein, chloroplast] -0.088 -0.047
92 266886_at AT2G44745 AtWRKY12, WRKY12, WRKY DNA-binding protein 12 -0.088 -0.026
93 266369_at AT2G41370 BOP2, BLADE ON PETIOLE2 -0.087 0.012
94 262941_at AT1G79490 EMB2217, embryo defective 2217 -0.086 -0.053
95 262701_at AT1G16480 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.085 -0.017