4.0:Information of module
ckh2 CK200
In comparison with 3.5h KNO3 Whole root help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044711 single-organism biosynthetic process BP 5.628e-18
GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 1.196e-17
GO:0019288 isopentenyl diphosphate biosynthetic pro... BP 3.080e-16
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010817 regulation of hormone levels BP 9.911e-11
GO:0016132 brassinosteroid biosynthetic process BP 5.450e-09
GO:0016129 phytosteroid biosynthetic process BP 7.107e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ckh2 CK200		 Log2 signal ratio
3.5h KNO3 Whole root
1 260584_at AT2G43660 [Carbohydrate-binding X8 domain superfamily protein] 0.917 0.049
2 257768_at AT3G23060 [RING/U-box superfamily protein] 0.914 -0.024
3 249482_at AT5G38980 unknown 0.844 -0.091
4 260706_at AT1G32350 AOX1D, alternative oxidase 1D 0.808 0.061
5 253962_at AT4G26460 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.788 -0.033
6 253667_at AT4G30170 [Peroxidase family protein] 0.774 -0.016
7 254371_at AT4G21760 BGLU47, beta-glucosidase 47 0.749 -0.006
8 260410_at AT1G69870 AtNPF2.13, NPF2.13, NRT1/ PTR family 2.13, NRT1.7, nitrate transporter 1.7 0.716 -0.126
9 248227_at AT5G53820 [Late embryogenesis abundant protein (LEA) family protein] 0.646 -0.172
10 261420_at AT1G07720 KCS3, 3-ketoacyl-CoA synthase 3 0.644 0.070
11 265117_at AT1G62500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.636 -0.125
12 255768_at AT1G16705 [p300/CBP acetyltransferase-related protein-related] 0.623 -0.023
13 260541_at AT2G43530 [Scorpion toxin-like knottin superfamily protein] 0.584 -0.005
14 262638_at AT1G06650 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.542 -0.098
15 251519_at AT3G59400 GUN4, GENOMES UNCOUPLED 4 0.523 -0.175
16 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.502 -0.212
17 253871_at AT4G27440 PORB, protochlorophyllide oxidoreductase B 0.482 -0.033
18 250006_at AT5G18660 PCB2, PALE-GREEN AND CHLOROPHYLL B REDUCED 2 0.477 -0.003
19 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.472 -0.010
20 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.464 0.013
21 246273_at AT4G36700 [RmlC-like cupins superfamily protein] 0.461 0.009
22 253173_at AT4G35110 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.461 0.093
23 248327_at AT5G52750 [Heavy metal transport/detoxification superfamily protein ] 0.459 -0.043
24 261191_at AT1G32900 GBSS1, granule bound starch synthase 1 0.457 0.062
25 259223_at AT3G03660 WOX11, WUSCHEL related homeobox 11 0.448 0.031
26 263182_at AT1G05575 unknown 0.439 -0.117
27 246238_at AT4G36670 AtPLT6, AtPMT6, PLT6, polyol transporter 6, PMT6, polyol/monosaccharide transporter 6 0.439 0.034
28 252972_at AT4G38840 SAUR14, SMALL AUXIN UPREGULATED RNA 14 0.436 -0.191
29 256927_at AT3G22550 unknown 0.435 -0.060
30 250435_at AT5G10380 ATRING1, RING1 0.434 -0.067
31 251036_at AT5G02160 unknown 0.428 0.009
32 245765_at AT1G33600 [Leucine-rich repeat (LRR) family protein] 0.425 0.011
33 262283_at AT1G68590 PSRP3/1, plastid-specific ribosomal protein 3/1 0.421 -0.219
34 255572_at AT4G01050 TROL, thylakoid rhodanese-like 0.420 -0.077
35 267288_at AT2G23680 [Cold acclimation protein WCOR413 family] 0.420 -0.032
36 265481_at AT2G15960 unknown 0.419 -0.046
37 250669_at AT5G06870 ATPGIP2, ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2, PGIP2, polygalacturonase inhibiting protein 2 0.413 -0.016
38 263142_at AT1G65230 [Uncharacterized conserved protein (DUF2358)] 0.411 0.021
39 261910_at AT1G80730 ATZFP1, ARABIDOPSIS THALIANA ZINC-FINGER PROTEIN 1, ZFP1, zinc-finger protein 1 0.408 -0.117
40 264839_at AT1G03630 POR C, protochlorophyllide oxidoreductase C, PORC 0.407 -0.068
41 252136_at AT3G50770 CML41, calmodulin-like 41 0.402 0.025
42 266293_at AT2G29360 [NAD(P)-binding Rossmann-fold superfamily protein] 0.398 -0.016
43 247320_at AT5G64040 PSAN 0.394 -0.287
44 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.389 -0.039
45 264301_at AT1G78780 [pathogenesis-related family protein] 0.383 -0.065
46 267076_at AT2G41090 [Calcium-binding EF-hand family protein] 0.371 0.032
47 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.370 -0.055
48 252116_at AT3G51510 unknown 0.367 -0.062
49 264824_at AT1G03420 Sadhu4-2, sadhu non-coding retrotransposon 4-2 0.366 -0.070
50 267003_at AT2G34340 unknown 0.365 -0.007
51 248348_at AT5G52190 [Sugar isomerase (SIS) family protein] 0.362 -0.132
52 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.360 0.026
53 245143_at AT2G45450 ZPR1, LITTLE ZIPPER 1 0.359 0.077
54 264157_at AT1G65310 ATXTH17, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, XTH17, xyloglucan endotransglucosylase/hydrolase 17 0.359 -0.000
55 261216_at AT1G33030 [O-methyltransferase family protein] 0.357 0.027
56 259552_at AT1G21320 [nucleotide binding] 0.356 0.024
57 249694_at AT5G35790 G6PD1, glucose-6-phosphate dehydrogenase 1 0.335 0.009
58 247487_at AT5G62150 [peptidoglycan-binding LysM domain-containing protein] 0.330 -0.105
59 261346_at AT1G79720 [Eukaryotic aspartyl protease family protein] 0.330 0.079
60 259010_at AT3G07340 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.324 0.028
61 248007_at AT5G56260 [Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase] 0.321 -0.091
62 247899_at AT5G57345 unknown 0.314 -0.230
63 266285_at AT2G29180 unknown 0.312 -0.080
64 249147_at AT5G43330 c-NAD-MDH2, cytosolic-NAD-dependent malate dehydrogenase 2 0.309 -0.091
65 249255_at AT5G41610 ATCHX18, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18, CHX18, cation/H+ exchanger 18 0.306 0.135
66 260696_at AT1G32520 unknown 0.306 0.007
67 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.305 0.050
68 265287_at AT2G20260 PSAE-2, photosystem I subunit E-2 0.303 -0.133
69 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase 0.302 0.034
70 251899_at AT3G54400 [Eukaryotic aspartyl protease family protein] 0.302 -0.032
71 249784_at AT5G24280 GMI1, GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 0.298 0.015
72 251983_at AT3G53210 UMAMIT6, Usually multiple acids move in and out Transporters 6 0.297 -0.024
73 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.935 0.005
74 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -0.894 -0.090
75 253084_at AT4G36260 SRS2, SHI RELATED SEQUENCE 2, STY2, STYLISH 2 -0.863 -0.006
76 252363_at AT3G48460 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.835 -0.021
77 253483_at AT4G31910 BAT1, BR-related AcylTransferase1, PIZ, PIZZA -0.809 0.029
78 263979_at AT2G42840 PDF1, protodermal factor 1 -0.782 -0.047
79 262819_at AT1G11600 CYP77B1, cytochrome P450, family 77, subfamily B, polypeptide 1 -0.781 -0.033
80 255111_at AT4G08780 [Peroxidase superfamily protein] -0.755 -0.000
81 254034_at AT4G25960 ABCB2, ATP-binding cassette B2, PGP2, P-glycoprotein 2 -0.731 0.009
82 264137_at AT1G78960 ATLUP2, lupeol synthase 2, LUP2, lupeol synthase 2 -0.716 0.054
83 253754_at AT4G29020 [glycine-rich protein] -0.706 -0.019
84 252943_at AT4G39330 ATCAD9, CAD9, cinnamyl alcohol dehydrogenase 9 -0.679 0.070
85 256750_at AT3G27150 [Galactose oxidase/kelch repeat superfamily protein] -0.665 -0.042
86 253054_at AT4G37580 COP3, CONSTITUTIVE PHOTOMORPHOGENIC 3, HLS1, HOOKLESS 1, UNS2, UNUSUAL SUGAR RESPONSE 2 -0.664 -0.067
87 253684_at AT4G29690 [Alkaline-phosphatase-like family protein] -0.664 0.056
88 262659_at AT1G14240 [GDA1/CD39 nucleoside phosphatase family protein] -0.654 0.062
89 258675_at AT3G08770 LTP6, lipid transfer protein 6 -0.638 -0.119
90 259350_at AT3G05140 RBK2, ROP binding protein kinases 2 -0.633 -0.008
91 251160_at AT3G63240 [DNAse I-like superfamily protein] -0.609 0.054
92 258253_at AT3G26760 [NAD(P)-binding Rossmann-fold superfamily protein] -0.601 0.023
93 256030_at AT1G34110 [Leucine-rich receptor-like protein kinase family protein] -0.598 0.058
94 267377_at AT2G26250 FDH, FIDDLEHEAD, KCS10, 3-ketoacyl-CoA synthase 10 -0.547 0.027
95 246908_at AT5G25610 ATRD22, RD22, RESPONSIVE TO DESSICATION 22 -0.542 0.046
96 262376_at AT1G72970 EDA17, embryo sac development arrest 17, HTH, HOTHEAD -0.541 0.044
97 251668_at AT3G57010 [Calcium-dependent phosphotriesterase superfamily protein] -0.532 0.034
98 249567_at AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.522 0.098
99 248736_at AT5G48110 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.518 -0.013
100 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 -0.511 0.039
101 253011_at AT4G37890 EDA40, embryo sac development arrest 40 -0.500 -0.005
102 248732_at AT5G48070 ATXTH20, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20, XTH20, xyloglucan endotransglucosylase/hydrolase 20 -0.497 -0.011
103 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.491 -0.061
104 245140_at AT2G45420 LBD18, LOB domain-containing protein 18 -0.489 0.056
105 262414_at AT1G49430 LACS2, long-chain acyl-CoA synthetase 2, LRD2, LATERAL ROOT DEVELOPMENT 2 -0.474 0.033
106 245141_at AT2G45400 BEN1, BRI1-5 ENHANCED 1 -0.468 0.085
107 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 -0.463 -0.057
108 249557_at AT5G38280 PR5K, PR5-like receptor kinase -0.461 0.049
109 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 -0.454 0.010
110 261878_at AT1G50560 CYP705A25, cytochrome P450, family 705, subfamily A, polypeptide 25 -0.453 -0.025
111 247884_at AT5G57800 CER3, ECERIFERUM 3, FLP1, FACELESS POLLEN 1, WAX2, YRE -0.451 0.069
112 248070_at AT5G55660 [DEK domain-containing chromatin associated protein] -0.447 -0.132
113 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] -0.445 -0.078
114 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 -0.437 -0.030
115 254392_at AT4G21600 ENDO5, endonuclease 5 -0.425 -0.073
116 261109_at AT1G75450 ATCKX5, ARABIDOPSIS THALIANA CYTOKININ OXIDASE 5, ATCKX6, CYTOKININ OXIDASE 6, CKX5, cytokinin oxidase 5 -0.418 0.070
117 252128_at AT3G50870 GATA18, GATA TRANSCRIPTION FACTOR 18, HAN, HANABA TANARU, MNP, MONOPOLE -0.417 -0.081
118 260943_at AT1G45145 ATH5, THIOREDOXIN H-TYPE 5, ATTRX5, thioredoxin H-type 5, LIV1, LOCUS OF INSENSITIVITY TO VICTORIN 1, TRX-h5, THIOREDOXIN H-TYPE 5, TRX5, thioredoxin H-type 5 -0.412 -0.008
119 251466_at AT3G59340 unknown -0.408 -0.027
120 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] -0.400 0.070
121 266596_at AT2G46150 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.385 0.055
122 253406_at AT4G32890 GATA9, GATA transcription factor 9 -0.384 -0.034
123 264384_at AT2G25170 CHD3, CHR6, CKH2, CYTOKININ-HYPERSENSITIVE 2, EPP1, ENHANCED PHOTOMORPHOGENIC 1, GYM, GYMNOS, PKL, PICKLE, SSL2, SUPPRESSOR OF SLR 2 -0.383 0.076
124 257105_at AT3G15300 [VQ motif-containing protein] -0.379 -0.041
125 258021_at AT3G19380 PUB25, plant U-box 25 -0.372 -0.058
126 261315_at AT1G53170 ATERF-8, ATERF8, ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4, ERF8, ethylene response factor 8 -0.372 -0.005
127 252321_at AT3G48510 unknown -0.369 0.058
128 247297_at AT5G64100 [Peroxidase superfamily protein] -0.367 0.022
129 253437_at AT4G32460 unknown -0.367 -0.006
130 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] -0.361 -0.082
131 263594_at AT2G01880 ATPAP7, PURPLE ACID PHOSPHATASE 7, PAP7, purple acid phosphatase 7 -0.360 -0.013
132 245382_at AT4G17800 AHL23, AT-hook motif nuclear localized protein 23 -0.358 -0.030
133 262538_at AT1G17140 ICR1, interactor of constitutive active rops 1, RIP1, ROP INTERACTIVE PARTNER 1 -0.357 0.044
134 254226_at AT4G23690 AtDIR6, Arabidopsis thaliana dirigent protein 6, DIR6, dirigent protein 6 -0.354 0.041
135 254122_at AT4G24510 CER2, ECERIFERUM 2, VC-2, VC2 -0.353 0.047
136 251013_at AT5G02540 [NAD(P)-binding Rossmann-fold superfamily protein] -0.347 0.021
137 262971_at AT1G75640 [Leucine-rich receptor-like protein kinase family protein] -0.344 0.071
138 264318_at AT1G04220 KCS2, 3-ketoacyl-CoA synthase 2 -0.337 0.021
139 248584_at AT5G49960 unknown -0.337 0.076
140 257923_at AT3G23160 unknown -0.335 0.114
141 266737_at AT2G47140 AtSDR5, SDR5, short-chain dehydrogenase reductase 5 -0.334 0.008
142 258599_at AT3G04520 THA2, threonine aldolase 2 -0.333 0.007
143 259680_at AT1G77690 LAX3, like AUX1 3 -0.330 0.065