4.0:Information of module
ckh2 CK0
In comparison with aln-1 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009657 plastid organization BP 7.221e-20
GO:0015979 photosynthesis BP 6.398e-17
GO:0006364 rRNA processing BP 4.295e-16
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0000041 transition metal ion transport BP 4.022e-08
GO:0031668 cellular response to extracellular stimu... BP 8.696e-07
GO:0071496 cellular response to external stimulus BP 9.645e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ckh2 CK0		 Log2 signal ratio
aln-1
1 256600_at AT3G14850 TBL41, TRICHOME BIREFRINGENCE-LIKE 41 0.801 0.025
2 260706_at AT1G32350 AOX1D, alternative oxidase 1D 0.758 -0.219
3 257768_at AT3G23060 [RING/U-box superfamily protein] 0.704 -0.014
4 260584_at AT2G43660 [Carbohydrate-binding X8 domain superfamily protein] 0.637 0.120
5 264892_at AT1G23160 [Auxin-responsive GH3 family protein] 0.613 -0.011
6 252320_at AT3G48580 XTH11, xyloglucan endotransglucosylase/hydrolase 11 0.603 -0.099
7 258923_at AT3G10450 SCPL7, serine carboxypeptidase-like 7 0.535 -0.370
8 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.531 -0.270
9 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 0.522 -0.055
10 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.521 -0.256
11 251535_at AT3G58540 unknown 0.516 0.022
12 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 0.508 -0.363
13 253738_at AT4G28750 PSAE-1, PSA E1 KNOCKOUT 0.481 0.003
14 256979_at AT3G21055 PSBTN, photosystem II subunit T 0.479 -0.028
15 266265_at AT2G29340 [NAD-dependent epimerase/dehydratase family protein] 0.467 -0.094
16 247208_at AT5G64870 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.465 0.066
17 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.460 -0.501
18 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 0.437 0.276
19 262283_at AT1G68590 PSRP3/1, plastid-specific ribosomal protein 3/1 0.435 -0.115
20 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.426 -0.545
21 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.413 -0.085
22 253871_at AT4G27440 PORB, protochlorophyllide oxidoreductase B 0.382 -0.067
23 258203_at AT3G13950 unknown 0.366 -0.211
24 267376_at AT2G26330 ER, ERECTA, QRP1, QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1 0.355 -0.079
25 259491_at AT1G15820 CP24, LHCB6, light harvesting complex photosystem II subunit 6 0.345 -0.053
26 248151_at AT5G54270 LHCB3, light-harvesting chlorophyll B-binding protein 3, LHCB3*1 0.340 -0.013
27 255457_at AT4G02770 PSAD-1, photosystem I subunit D-1 0.340 -0.033
28 264626_at AT1G65620 AS2, ASYMMETRIC LEAVES 2 0.335 0.065
29 256830_at AT3G22860 ATEIF3C-2, ATTIF3C2, EIF3C-2, EUKARYOTIC INITIATION FACTOR 3C-2, TIF3C2, eukaryotic translation initiation factor 3 subunit C2 0.326 -0.036
30 252929_at AT4G38970 AtFBA2, FBA2, fructose-bisphosphate aldolase 2 0.324 -0.076
31 251519_at AT3G59400 GUN4, GENOMES UNCOUPLED 4 0.322 -0.146
32 263761_at AT2G21330 AtFBA1, FBA1, fructose-bisphosphate aldolase 1 0.313 -0.140
33 261746_at AT1G08380 PSAO, photosystem I subunit O 0.309 -0.008
34 251082_at AT5G01530 LHCB4.1, light harvesting complex photosystem II 0.292 -0.011
35 264037_at AT2G03750 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.287 -0.286
36 259838_at AT1G52220 CURT1C, CURVATURE THYLAKOID 1C 0.286 -0.097
37 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 0.285 0.153
38 259625_at AT1G42970 GAPB, glyceraldehyde-3-phosphate dehydrogenase B subunit 0.280 -0.076
39 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 0.278 -0.171
40 248301_at AT5G53150 [DNAJ heat shock N-terminal domain-containing protein] 0.278 -0.095
41 265741_at AT2G01320 ABCG7, ATP-binding cassette G7 0.271 -0.158
42 260529_at AT2G47400 CP12, CP12 DOMAIN-CONTAINING PROTEIN 1, CP12-1, CP12 domain-containing protein 1 0.271 -0.029
43 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 0.269 -0.046
44 257168_at AT3G24430 HCF101, HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.263 -0.096
45 262632_at AT1G06680 OE23, OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA, OEE2, OXYGEN-EVOLVING ENHANCER PROTEIN 2, PSBP-1, photosystem II subunit P-1, PSII-P, PHOTOSYSTEM II SUBUNIT P 0.261 0.000
46 258064_at AT3G14680 CYP72A14, cytochrome P450, family 72, subfamily A, polypeptide 14 0.260 0.058
47 248371_at AT5G51810 AT2353, ATGA20OX2, GA20OX2, gibberellin 20 oxidase 2 0.257 -0.017
48 254876_at AT4G11610 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.256 0.032
49 261527_at AT1G14390 [Leucine-rich repeat protein kinase family protein] 0.251 0.008
50 247458_at AT5G62180 AtCXE20, carboxyesterase 20, CXE20, carboxyesterase 20 0.249 -0.116
51 265033_at AT1G61520 LHCA3, photosystem I light harvesting complex gene 3 0.248 0.036
52 263142_at AT1G65230 [Uncharacterized conserved protein (DUF2358)] 0.248 -0.108
53 247645_at AT5G60530 [late embryogenesis abundant protein-related / LEA protein-related] -0.986 0.250
54 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.967 0.354
55 259328_at AT3G16440 ATMLP-300B, myrosinase-binding protein-like protein-300B, MEE36, maternal effect embryo arrest 36, MLP-300B, myrosinase-binding protein-like protein-300B -0.856 0.164
56 248736_at AT5G48110 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.755 0.633
57 249567_at AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.681 0.694
58 256548_at AT3G14770 AtSWEET2, SWEET2 -0.671 0.048
59 251595_at AT3G57620 [glyoxal oxidase-related protein] -0.661 -0.008
60 252006_at AT3G52820 ATPAP22, PURPLE ACID PHOSPHATASE 22, PAP22, purple acid phosphatase 22 -0.632 0.009
61 261425_at AT1G18880 AtNPF2.9, NPF2.9, NRT1/ PTR family 2.9, NRT1.9, nitrate transporter 1.9 -0.609 0.166
62 265305_at AT2G20340 AAS, aromatic aldehyde synthase, AtAAS -0.602 0.360
63 267119_at AT2G32610 ATCSLB01, cellulose synthase-like B1, ATCSLB1, CELLULOSE SYNTHASE LIKE B1, CSLB01, CELLULOSE SYNTHASE LIKE B1, CSLB01, cellulose synthase-like B1 -0.595 0.101
64 263282_at AT2G14095 unknown -0.582 0.072
65 249009_at AT5G44610 MAP18, microtubule-associated protein 18, PCAP2, PLASMA MEMBRANE ASSOCIATED CA2+-BINDING PROTEIN-2 -0.577 0.029
66 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 -0.554 -0.329
67 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] -0.542 -0.021
68 255302_at AT4G04830 ATMSRB5, methionine sulfoxide reductase B5, MSRB5, methionine sulfoxide reductase B5 -0.538 0.057
69 247640_at AT5G60610 [F-box/RNI-like superfamily protein] -0.519 0.009
70 249557_at AT5G38280 PR5K, PR5-like receptor kinase -0.512 0.421
71 262831_at AT1G14730 [Cytochrome b561/ferric reductase transmembrane protein family] -0.510 0.241
72 265119_at AT1G62570 FMO GS-OX4, flavin-monooxygenase glucosinolate S-oxygenase 4 -0.495 0.931
73 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 -0.493 0.191
74 247003_at AT5G67550 unknown -0.489 0.029
75 256021_at AT1G58270 ZW9 -0.487 0.110
76 254013_at AT4G26050 PIRL8, plant intracellular ras group-related LRR 8 -0.482 0.032
77 260867_at AT1G43790 TED6, tracheary element differentiation-related 6 -0.477 0.229
78 251293_at AT3G61930 unknown -0.472 0.049
79 253743_at AT4G28940 [Phosphorylase superfamily protein] -0.467 0.223
80 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 -0.449 0.130
81 262873_at AT1G64700 unknown -0.447 0.576
82 247696_at AT5G59780 ATMYB59, MYB DOMAIN PROTEIN 59, ATMYB59-1, ATMYB59-2, ATMYB59-3, MYB59, myb domain protein 59 -0.437 0.087
83 264102_at AT1G79270 ECT8, evolutionarily conserved C-terminal region 8 -0.432 0.210
84 255578_at AT4G01450 UMAMIT30, Usually multiple acids move in and out Transporters 30 -0.431 0.351
85 253332_at AT4G33420 [Peroxidase superfamily protein] -0.424 0.203
86 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] -0.422 0.382
87 262796_at AT1G20850 XCP2, xylem cysteine peptidase 2 -0.420 0.143
88 250958_at AT5G03260 LAC11, laccase 11 -0.414 0.135
89 258049_at AT3G16220 [Predicted eukaryotic LigT] -0.411 0.137
90 247440_at AT5G62680 AtNPF2.11, GTR2, GLUCOSINOLATE TRANSPORTER-2, NPF2.11, NRT1/ PTR family 2.11 -0.406 0.196
91 250475_at AT5G10180 AST68, ARABIDOPSIS SULFATE TRANSPORTER 68, SULTR2;1, sulfate transporter 2;1 -0.398 -0.006
92 249033_at AT5G44920 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.394 0.009
93 252606_at AT3G45010 scpl48, serine carboxypeptidase-like 48 -0.394 0.211
94 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] -0.391 -0.066
95 266021_at AT2G05910 unknown -0.385 0.025
96 264384_at AT2G25170 CHD3, CHR6, CKH2, CYTOKININ-HYPERSENSITIVE 2, EPP1, ENHANCED PHOTOMORPHOGENIC 1, GYM, GYMNOS, PKL, PICKLE, SSL2, SUPPRESSOR OF SLR 2 -0.382 -0.016
97 259568_at AT1G20490 [AMP-dependent synthetase and ligase family protein] -0.379 0.147
98 265327_at AT2G18210 unknown -0.372 0.163
99 265480_at AT2G15970 ATCOR413-PM1, ARABIDOPSIS THALIANA COLD-REGULATED413 PLASMA MEMBRANE 1, ATCYP19, CYCLOPHILLIN 19, COR413-PM1, cold regulated 413 plasma membrane 1, FL3-5A3, WCOR413, WCOR413-LIKE -0.362 0.149
100 259853_at AT1G72300 PSY1R, PSY1 receptor -0.352 -0.081
101 257952_at AT3G21770 [Peroxidase superfamily protein] -0.340 0.224
102 256273_at AT3G12090 TET6, tetraspanin6 -0.338 0.205
103 254797_at AT4G13030 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.333 0.041