4.0:Information of module
ckh1 CK25
In comparison with Light help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019684 photosynthesis, light reaction BP 3.828e-09
GO:0015979 photosynthesis BP 2.382e-08
GO:0006790 sulfur compound metabolic process BP 5.645e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0007167 enzyme linked receptor protein signaling... BP 1.955e-05
GO:0007169 transmembrane receptor protein tyrosine ... BP 1.955e-05
GO:0007166 cell surface receptor signaling pathway BP 2.061e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ckh1 CK25		 Log2 signal ratio
Light
1 250669_at AT5G06870 ATPGIP2, ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2, PGIP2, polygalacturonase inhibiting protein 2 0.692 0.015
2 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.581 0.131
3 261474_at AT1G14540 PER4, peroxidase 4 0.549 0.686
4 246998_at AT5G67370 CGLD27, CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27 0.539 -0.011
5 250798_at AT5G05340 PRX52, peroxidase 52 0.533 0.058
6 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.523 -0.005
7 260584_at AT2G43660 [Carbohydrate-binding X8 domain superfamily protein] 0.508 -0.026
8 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 0.498 -0.007
9 264892_at AT1G23160 [Auxin-responsive GH3 family protein] 0.467 0.031
10 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.442 0.075
11 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.426 0.066
12 247515_at AT5G61740 ABCA10, ATP-binding cassette A10, ATATH14, ARABIDOPSIS THALIANA ABC2 HOMOLOG 14, ATH14, ABC2 homolog 14 0.412 0.005
13 245143_at AT2G45450 ZPR1, LITTLE ZIPPER 1 0.402 -0.131
14 250722_at AT5G06190 unknown 0.390 0.063
15 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] 0.365 0.067
16 253045_at AT4G37445 unknown 0.346 0.037
17 261311_at AT1G05770 [Mannose-binding lectin superfamily protein] 0.329 0.061
18 260112_at AT1G63310 unknown 0.328 0.052
19 262283_at AT1G68590 PSRP3/1, plastid-specific ribosomal protein 3/1 0.318 -0.012
20 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.316 0.013
21 258414_at AT3G17380 [TRAF-like family protein] 0.311 0.049
22 264545_at AT1G55670 PSAG, photosystem I subunit G 0.296 -0.002
23 245347_at AT4G14890 FdC1, ferredoxin C 1 0.292 0.005
24 264962_at AT1G77110 PIN6, PIN-FORMED 6 0.287 0.018
25 258560_at AT3G06020 FAF4, FANTASTIC FOUR 4 0.286 0.064
26 256646_at AT3G13590 [Cysteine/Histidine-rich C1 domain family protein] 0.285 -0.021
27 253112_at AT4G35970 APX5, ascorbate peroxidase 5 0.285 -0.112
28 253173_at AT4G35110 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.279 0.117
29 266325_at AT2G46630 unknown 0.277 0.067
30 262255_at AT1G53790 [F-box and associated interaction domains-containing protein] 0.277 -0.014
31 267171_at AT2G37590 ATDOF2.4, DOF2.4, DNA binding with one finger 2.4 0.277 0.030
32 265205_at AT2G36660 PAB7, poly(A) binding protein 7 0.268 -0.006
33 261870_at AT1G11570 NTL, NTF2-like 0.267 -0.002
34 249971_at AT5G19110 [Eukaryotic aspartyl protease family protein] 0.264 0.121
35 255248_at AT4G05180 PSBQ, PHOTOSYSTEM II SUBUNIT Q, PSBQ-2, photosystem II subunit Q-2, PSII-Q 0.256 -0.023
36 253331_at AT4G33490 [Eukaryotic aspartyl protease family protein] 0.256 0.007
37 257806_at AT3G18670 [Ankyrin repeat family protein] 0.250 -0.084
38 248731_at AT5G48060 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.245 -0.066
39 263108_at AT1G65240 [Eukaryotic aspartyl protease family protein] 0.241 0.003
40 264360_at AT1G03310 AtBE2, ATISA2, ARABIDOPSIS THALIANA ISOAMYLASE 2, BE2, BRANCHING ENZYME 2, DBE1, debranching enzyme 1, ISA2 0.240 -0.030
41 261910_at AT1G80730 ATZFP1, ARABIDOPSIS THALIANA ZINC-FINGER PROTEIN 1, ZFP1, zinc-finger protein 1 0.236 0.058
42 259223_at AT3G03660 WOX11, WUSCHEL related homeobox 11 0.230 -0.046
43 264185_at AT1G54780 AtTLP18.3, TLP18.3, thylakoid lumen protein 18.3 0.226 -0.049
44 259166_at AT3G01670 AtSEOR2, Arabidopsis thaliana sieve element occlusion-related 2, SEOa, sieve element occlusion a, SEOR2, sieve element occlusion-related 2 0.223 0.066
45 249524_at AT5G38520 [alpha/beta-Hydrolases superfamily protein] 0.222 -0.102
46 257295_at AT3G17420 GPK1, glyoxysomal protein kinase 1 0.221 0.018
47 254970_at AT4G10340 LHCB5, light harvesting complex of photosystem II 5 0.218 -0.053
48 256210_at AT1G50950 [INVOLVED IN: cell redox homeostasis] 0.218 0.037
49 251131_at AT5G01190 LAC10, laccase 10 0.217 0.000
50 260097_at AT1G73220 AtOCT1, organic cation/carnitine transporter1, OCT1, organic cation/carnitine transporter1 -0.970 -0.010
51 250059_at AT5G17820 [Peroxidase superfamily protein] -0.915 0.030
52 267119_at AT2G32610 ATCSLB01, cellulose synthase-like B1, ATCSLB1, CELLULOSE SYNTHASE LIKE B1, CSLB01, CELLULOSE SYNTHASE LIKE B1, CSLB01, cellulose synthase-like B1 -0.900 -0.068
53 262198_at AT1G53830 ATPME2, pectin methylesterase 2, PME2, pectin methylesterase 2 -0.774 -0.043
54 265119_at AT1G62570 FMO GS-OX4, flavin-monooxygenase glucosinolate S-oxygenase 4 -0.687 0.079
55 260492_at AT2G41850 ADPG2, ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2, PGAZAT, polygalacturonase abscission zone A. thaliana -0.676 0.012
56 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 -0.673 0.028
57 258769_at AT3G10870 ATMES17, ARABIDOPSIS THALIANA METHYL ESTERASE 17, MES17, methyl esterase 17 -0.660 -0.034
58 260335_at AT1G74000 SS3, strictosidine synthase 3 -0.598 0.028
59 254013_at AT4G26050 PIRL8, plant intracellular ras group-related LRR 8 -0.583 -0.036
60 264640_at AT1G65680 ATEXPB2, expansin B2, ATHEXP BETA 1.4, EXPB2, expansin B2 -0.565 0.011
61 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] -0.546 0.134
62 261430_at AT1G18830 SEC31A -0.516 -0.024
63 252004_at AT3G52780 ATPAP20, PAP20 -0.506 -0.088
64 249813_at AT5G23940 DCR, DEFECTIVE IN CUTICULAR RIDGES, EMB3009, EMBRYO DEFECTIVE 3009, PEL3, PERMEABLE LEAVES3 -0.506 0.024
65 264144_at AT1G79320 AtMC6, metacaspase 6, AtMCP2c, metacaspase 2c, MC6, metacaspase 6, MCP2c, metacaspase 2c -0.488 0.050
66 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 -0.482 0.069
67 260890_at AT1G29090 [Cysteine proteinases superfamily protein] -0.479 -0.008
68 256515_at AT1G66020 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.473 -0.073
69 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 -0.464 -0.042
70 254467_at AT4G20450 [Leucine-rich repeat protein kinase family protein] -0.454 0.004
71 255037_at AT4G09460 AtMYB6, myb domain protein 6, MYB6, myb domain protein 6 -0.452 0.242
72 252195_at AT3G50190 unknown -0.448 -0.085
73 262826_at AT1G13080 CYP71B2, cytochrome P450, family 71, subfamily B, polypeptide 2 -0.448 0.110
74 252300_at AT3G49160 [pyruvate kinase family protein] -0.445 -0.133
75 253097_at AT4G37320 CYP81D5, cytochrome P450, family 81, subfamily D, polypeptide 5 -0.445 -0.053
76 248333_at AT5G52390 [PAR1 protein] -0.443 -0.075
77 265771_at AT2G48030 [DNAse I-like superfamily protein] -0.433 0.027
78 247093_at AT5G66350 SHI, SHORT INTERNODES -0.414 -0.055
79 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -0.414 -0.036
80 249123_at AT5G43760 KCS20, 3-ketoacyl-CoA synthase 20 -0.400 0.055
81 248807_at AT5G47500 PME5, pectin methylesterase 5 -0.399 -0.041
82 264957_at AT1G77000 ATSKP2;2, ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2, SKP2B -0.396 -0.075
83 267307_at AT2G30210 LAC3, laccase 3 -0.395 -0.015
84 247246_at AT5G64620 ATC/VIF2, CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2, C/VIF2, cell wall / vacuolar inhibitor of fructosidase 2 -0.395 0.099
85 262971_at AT1G75640 [Leucine-rich receptor-like protein kinase family protein] -0.392 -0.108
86 253084_at AT4G36260 SRS2, SHI RELATED SEQUENCE 2, STY2, STYLISH 2 -0.389 0.024
87 249927_at AT5G19220 ADG2, ADP GLUCOSE PYROPHOSPHORYLASE 2, APL1, ADP glucose pyrophosphorylase large subunit 1 -0.389 -0.107
88 248908_at AT5G45800 MEE62, maternal effect embryo arrest 62 -0.385 -0.070
89 266613_at AT2G14900 [Gibberellin-regulated family protein] -0.373 0.026
90 246216_at AT4G36380 ROT3, ROTUNDIFOLIA 3 -0.372 -0.036
91 254786_at AT4G12890 [Gamma interferon responsive lysosomal thiol (GILT) reductase family protein] -0.372 0.028
92 250045_at AT5G17700 [MATE efflux family protein] -0.366 0.097
93 263174_at AT1G54040 ESP, epithiospecifier protein, ESR, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY -0.365 0.117
94 264527_at AT1G30760 [FAD-binding Berberine family protein] -0.364 0.071
95 259982_at AT1G76410 ATL8 -0.363 -0.156
96 260024_at AT1G30080 [Glycosyl hydrolase superfamily protein] -0.363 -0.072
97 250142_at AT5G14650 [Pectin lyase-like superfamily protein] -0.357 -0.026