4.0:Information of module
ckh1 CK0
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0005984 disaccharide metabolic process BP 1.098e-04
GO:0009311 oligosaccharide metabolic process BP 1.226e-04
GO:0043085 positive regulation of catalytic activit... BP 3.598e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 4.374e-10
GO:0015706 nitrate transport BP 2.019e-09
GO:0006811 ion transport BP 3.767e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ckh1 CK0		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 0.540 0.742
2 250722_at AT5G06190 unknown 0.411 0.110
3 265530_at AT2G06050 AtOPR3, DDE1, DELAYED DEHISCENCE 1, OPR3, oxophytodienoate-reductase 3 0.390 1.103
4 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 0.386 0.829
5 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.384 -0.119
6 263709_at AT1G09310 unknown 0.341 0.145
7 258560_at AT3G06020 FAF4, FANTASTIC FOUR 4 0.330 0.107
8 245692_at AT5G04150 BHLH101 0.327 -0.556
9 267376_at AT2G26330 ER, ERECTA, QRP1, QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1 0.327 1.167
10 264626_at AT1G65620 AS2, ASYMMETRIC LEAVES 2 0.324 -0.255
11 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 0.321 -0.131
12 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] 0.316 -0.432
13 250670_at AT5G06860 ATPGIP1, POLYGALACTURONASE INHIBITING PROTEIN 1, PGIP1, polygalacturonase inhibiting protein 1 0.280 -0.510
14 247515_at AT5G61740 ABCA10, ATP-binding cassette A10, ATATH14, ARABIDOPSIS THALIANA ABC2 HOMOLOG 14, ATH14, ABC2 homolog 14 0.276 -0.862
15 257929_at AT3G16980 NRPB9A, NRPD9A, NRPE9A 0.251 0.837
16 265276_at AT2G28400 unknown 0.244 0.107
17 258608_at AT3G03020 unknown 0.241 0.438
18 246943_at AT5G25440 [Protein kinase superfamily protein] 0.239 -0.849
19 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.235 -0.131
20 265205_at AT2G36660 PAB7, poly(A) binding protein 7 0.233 -0.127
21 260101_at AT1G73260 ATKTI1, ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, KTI1, kunitz trypsin inhibitor 1 0.228 0.396
22 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] 0.224 -0.455
23 266739_at AT2G46730 [pseudogene] 0.216 -0.299
24 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.214 -0.810
25 261220_at AT1G19970 [ER lumen protein retaining receptor family protein] 0.201 1.016
26 266749_at AT2G47060 PTI1-4, Pto-interacting 1-4 0.197 -0.546
27 261535_at AT1G01725 unknown 0.190 -0.646
28 260401_at AT1G69840 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.188 0.001
29 248740_at AT5G48130 [Phototropic-responsive NPH3 family protein] 0.188 -0.519
30 254524_at AT4G20000 [VQ motif-containing protein] 0.171 -0.404
31 258008_at AT3G19430 [late embryogenesis abundant protein-related / LEA protein-related] 0.167 -0.755
32 258510_at AT3G06600 unknown 0.165 0.602
33 246908_at AT5G25610 ATRD22, RD22, RESPONSIVE TO DESSICATION 22 0.163 1.000
34 256837_at AT3G22900 NRPD7 0.156 0.444
35 263808_at AT2G04340 unknown 0.155 -0.883
36 252408_at AT3G47600 ATMYB94, myb domain protein 94, ATMYBCP70, MYB94, myb domain protein 94 0.155 -0.267
37 252245_at AT3G49710 [Pentatricopeptide repeat (PPR) superfamily protein] 0.153 0.338
38 264318_at AT1G04220 KCS2, 3-ketoacyl-CoA synthase 2 0.153 0.312
39 257168_at AT3G24430 HCF101, HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.153 0.596
40 250762_at AT5G05990 [Mitochondrial glycoprotein family protein] 0.152 0.933
41 263158_at AT1G54160 NF-YA5, nuclear factor Y, subunit A5, NFYA5, NUCLEAR FACTOR Y A5 0.151 -0.847
42 262046_at AT1G79960 ATOFP14, OFP14, ovate family protein 14 0.150 -0.783
43 245768_at AT1G33590 [Leucine-rich repeat (LRR) family protein] 0.147 0.756
44 253882_at AT4G27650 PEL1, PELOTA 0.140 0.211
45 262338_at AT1G64185 [Lactoylglutathione lyase / glyoxalase I family protein] 0.138 0.017
46 265894_at AT2G15050 LTP, lipid transfer protein, LTP7, lipid transfer protein 7 0.137 -0.604
47 250382_at AT5G11580 [Regulator of chromosome condensation (RCC1) family protein] 0.137 0.196
48 246132_at AT5G20850 ATRAD51, RAD51 0.136 0.291
49 253780_at AT4G28400 [Protein phosphatase 2C family protein] 0.135 0.386
50 257373_at AT2G43140 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.134 -0.872
51 254287_at AT4G22960 unknown 0.132 0.053
52 266601_at AT2G46060 [transmembrane protein-related] 0.123 0.453
53 261681_at AT1G47340 [F-box and associated interaction domains-containing protein] 0.122 1.059
54 246762_at AT5G27620 CYCH;1, cyclin H;1 0.122 0.515
55 256646_at AT3G13590 [Cysteine/Histidine-rich C1 domain family protein] 0.121 -0.410
56 259328_at AT3G16440 ATMLP-300B, myrosinase-binding protein-like protein-300B, MEE36, maternal effect embryo arrest 36, MLP-300B, myrosinase-binding protein-like protein-300B -1.087 -0.850
57 267119_at AT2G32610 ATCSLB01, cellulose synthase-like B1, ATCSLB1, CELLULOSE SYNTHASE LIKE B1, CSLB01, CELLULOSE SYNTHASE LIKE B1, CSLB01, cellulose synthase-like B1 -1.017 -0.447
58 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -0.947 0.468
59 250059_at AT5G17820 [Peroxidase superfamily protein] -0.891 -0.824
60 260492_at AT2G41850 ADPG2, ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2, PGAZAT, polygalacturonase abscission zone A. thaliana -0.815 -0.731
61 258293_at AT3G23430 ATPHO1, ARABIDOPSIS PHOSPHATE 1, PHO1, phosphate 1 -0.808 -0.198
62 264987_at AT1G27030 unknown -0.780 0.865
63 258769_at AT3G10870 ATMES17, ARABIDOPSIS THALIANA METHYL ESTERASE 17, MES17, methyl esterase 17 -0.777 -0.047
64 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 -0.770 -0.385
65 247696_at AT5G59780 ATMYB59, MYB DOMAIN PROTEIN 59, ATMYB59-1, ATMYB59-2, ATMYB59-3, MYB59, myb domain protein 59 -0.751 -0.619
66 262260_at AT1G70850 MLP34, MLP-like protein 34 -0.748 -1.176
67 256548_at AT3G14770 AtSWEET2, SWEET2 -0.748 -0.626
68 265119_at AT1G62570 FMO GS-OX4, flavin-monooxygenase glucosinolate S-oxygenase 4 -0.746 -0.469
69 251595_at AT3G57620 [glyoxal oxidase-related protein] -0.738 -0.837
70 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] -0.737 -0.119
71 245386_at AT4G14010 RALFL32, ralf-like 32 -0.715 0.362
72 248736_at AT5G48110 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.710 -0.777
73 256815_at AT3G21380 [Mannose-binding lectin superfamily protein] -0.704 0.402
74 263282_at AT2G14095 unknown -0.698 -0.200
75 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.680 -0.859
76 254225_at AT4G23670 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.673 1.065
77 264931_at AT1G60590 [Pectin lyase-like superfamily protein] -0.670 -0.801
78 254674_at AT4G18450 [Integrase-type DNA-binding superfamily protein] -0.669 -0.219
79 249097_at AT5G43520 [Cysteine/Histidine-rich C1 domain family protein] -0.668 -0.768
80 260335_at AT1G74000 SS3, strictosidine synthase 3 -0.667 -0.466
81 254013_at AT4G26050 PIRL8, plant intracellular ras group-related LRR 8 -0.666 -0.700
82 260890_at AT1G29090 [Cysteine proteinases superfamily protein] -0.659 -1.078
83 260559_at AT2G43860 [Pectin lyase-like superfamily protein] -0.628 -0.117
84 262454_at AT1G11190 BFN1, bifunctional nuclease i, ENDO1, ENDONUCLEASE 1 -0.624 -0.031
85 256515_at AT1G66020 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.605 -0.328
86 266866_at AT2G29940 ABCG31, ATP-binding cassette G31, ATPDR3, PLEIOTROPIC DRUG RESISTANCE 3, PDR3, pleiotropic drug resistance 3 -0.605 -0.190
87 261425_at AT1G18880 AtNPF2.9, NPF2.9, NRT1/ PTR family 2.9, NRT1.9, nitrate transporter 1.9 -0.597 -0.426
88 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 -0.583 -0.577
89 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 -0.580 0.644
90 264102_at AT1G79270 ECT8, evolutionarily conserved C-terminal region 8 -0.578 -0.593
91 267038_at AT2G38480 [Uncharacterised protein family (UPF0497)] -0.576 0.561
92 249567_at AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.575 0.157
93 250142_at AT5G14650 [Pectin lyase-like superfamily protein] -0.568 -0.562
94 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 -0.566 -0.729
95 252004_at AT3G52780 ATPAP20, PAP20 -0.566 -1.006
96 263689_at AT1G26820 RNS3, ribonuclease 3 -0.563 0.078
97 253332_at AT4G33420 [Peroxidase superfamily protein] -0.560 -0.497
98 267548_at AT2G32660 AtRLP22, receptor like protein 22, RLP22, receptor like protein 22 -0.555 -0.459
99 262637_at AT1G06640 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.548 0.106
100 264782_at AT1G08810 AtMYB60, myb domain protein 60, MYB60, myb domain protein 60 -0.542 -0.857
101 257309_at AT3G28150 AXY4L, ALTERED XYLOGLUCAN 4-LIKE, TBL22, TRICHOME BIREFRINGENCE-LIKE 22 -0.542 -0.308
102 257761_at AT3G23090 WDL3 -0.539 -0.489
103 252006_at AT3G52820 ATPAP22, PURPLE ACID PHOSPHATASE 22, PAP22, purple acid phosphatase 22 -0.536 -0.642
104 262972_at AT1G75620 [glyoxal oxidase-related protein] -0.528 -0.470
105 256011_at AT1G19230 [Riboflavin synthase-like superfamily protein] -0.527 -1.095
106 266322_at AT2G46690 SAUR32, SMALL AUXIN UPREGULATED RNA 32 -0.524 -0.028
107 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 -0.522 0.427
108 250045_at AT5G17700 [MATE efflux family protein] -0.511 0.481
109 267127_at AT2G23610 ATMES3, ARABIDOPSIS THALIANA METHYL ESTERASE 3, MES3, methyl esterase 3 -0.510 -0.186