4.0:Information of module
WT (Ler) CK200
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044036 cell wall macromolecule metabolic proces... BP 1.677e-18
GO:0042546 cell wall biogenesis BP 8.978e-16
GO:0010413 glucuronoxylan metabolic process BP 3.210e-15
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0000041 transition metal ion transport BP 4.077e-06
GO:0015698 inorganic anion transport BP 1.330e-05
GO:0015706 nitrate transport BP 1.533e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
WT (Ler) CK200		 Log2 signal ratio
bri1-116
1 248684_at AT5G48485 DIR1, DEFECTIVE IN INDUCED RESISTANCE 1 0.978 0.250
2 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 0.753 -0.036
3 251292_at AT3G61920 unknown 0.753 0.066
4 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 0.719 0.788
5 254217_at AT4G23720 unknown 0.684 -0.136
6 264815_at AT1G03620 [ELMO/CED-12 family protein] 0.660 0.050
7 263384_at AT2G40130 SMXL8, SMAX1-like 8 0.657 0.007
8 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.655 -0.497
9 265116_at AT1G62480 [Vacuolar calcium-binding protein-related] 0.643 -0.202
10 249601_at AT5G37980 [Zinc-binding dehydrogenase family protein] 0.628 -0.080
11 247965_at AT5G56540 AGP14, arabinogalactan protein 14, ATAGP14 0.621 -0.463
12 249971_at AT5G19110 [Eukaryotic aspartyl protease family protein] 0.615 -0.097
13 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] 0.591 -0.273
14 254333_at AT4G22753 ATSMO1-3, SMO1-3, sterol 4-alpha methyl oxidase 1-3 0.573 0.043
15 249970_at AT5G19100 [Eukaryotic aspartyl protease family protein] 0.564 -0.133
16 253627_at AT4G30650 [Low temperature and salt responsive protein family] 0.554 -0.029
17 263841_at AT2G36870 AtXTH32, XTH32, xyloglucan endotransglucosylase/hydrolase 32 0.550 0.236
18 262830_at AT1G14700 ATPAP3, PAP3, purple acid phosphatase 3 0.546 0.049
19 265923_at AT2G18470 AtPERK4, proline-rich extensin-like receptor kinase 4, PERK4, proline-rich extensin-like receptor kinase 4 0.542 0.003
20 246827_at AT5G26330 [Cupredoxin superfamily protein] 0.537 -0.257
21 259801_at AT1G72230 [Cupredoxin superfamily protein] 0.520 -0.291
22 257896_at AT3G16920 ATCTL2, CTL2, chitinase-like protein 2 0.510 -0.190
23 266352_at AT2G01610 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.510 -0.352
24 261921_at AT1G65900 unknown 0.493 -0.036
25 266996_at AT2G34490 CYP710A2, cytochrome P450, family 710, subfamily A, polypeptide 2 0.483 -0.553
26 262704_at AT1G16530 ASL9, ASYMMETRIC LEAVES 2-like 9, LBD3, LOB DOMAIN-CONTAINING PROTEIN 3 0.474 -0.060
27 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] 0.461 -0.477
28 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 0.457 0.136
29 266227_at AT2G28870 unknown 0.447 0.021
30 259373_at AT1G69160 unknown 0.445 0.040
31 249920_at AT5G19260 FAF3, FANTASTIC FOUR 3 0.439 0.016
32 257978_at AT3G20860 ATNEK5, NIMA-related kinase 5, NEK5, NIMA-related kinase 5 0.438 0.042
33 261460_at AT1G07880 ATMPK13 0.434 -0.147
34 262388_at AT1G49320 unknown 0.433 0.271
35 250669_at AT5G06870 ATPGIP2, ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2, PGIP2, polygalacturonase inhibiting protein 2 0.428 0.322
36 253191_at AT4G35350 XCP1, xylem cysteine peptidase 1 0.428 -0.156
37 254633_at AT4G18640 MRH1, morphogenesis of root hair 1 0.423 -0.178
38 265463_at AT2G37090 IRX9, IRREGULAR XYLEM 9 0.405 -0.232
39 261501_at AT1G28390 [Protein kinase superfamily protein] 0.403 0.058
40 246932_at AT5G25190 ESE3, ethylene and salt inducible 3 0.401 0.295
41 252419_at AT3G47510 unknown 0.398 0.071
42 263998_at AT2G22510 [hydroxyproline-rich glycoprotein family protein] -0.761 0.042
43 256302_at AT1G69526 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.720 0.027
44 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 -0.593 0.077
45 246997_at AT5G67390 unknown -0.544 -0.323
46 255302_at AT4G04830 ATMSRB5, methionine sulfoxide reductase B5, MSRB5, methionine sulfoxide reductase B5 -0.509 -0.027
47 249626_at AT5G37540 [Eukaryotic aspartyl protease family protein] -0.490 0.110
48 245412_at AT4G17280 [Auxin-responsive family protein] -0.467 -0.407
49 262349_at AT2G48130 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.454 -0.141
50 246216_at AT4G36380 ROT3, ROTUNDIFOLIA 3 -0.404 -0.002
51 248777_at AT5G47920 unknown -0.400 0.121
52 256933_at AT3G22600 LTPG5, glycosylphosphatidylinositol-anchored lipid protein transfer 5 -0.382 -0.223
53 250239_at AT5G13580 ABCG6, ATP-binding cassette G6 -0.375 0.016
54 250702_at AT5G06730 [Peroxidase superfamily protein] -0.365 -0.213
55 248736_at AT5G48110 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.344 -0.277
56 256217_at AT1G56320 unknown -0.332 -0.025
57 259429_at AT1G01600 CYP86A4, cytochrome P450, family 86, subfamily A, polypeptide 4 -0.324 -0.511
58 250230_at AT5G13900 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.322 -0.070
59 261420_at AT1G07720 KCS3, 3-ketoacyl-CoA synthase 3 -0.320 -0.280
60 251940_at AT3G53450 LOG4, LONELY GUY 4 -0.301 -0.004
61 262873_at AT1G64700 unknown -0.267 -0.254
62 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 -0.266 0.141
63 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] -0.264 0.144
64 252221_at AT3G49830 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.264 -0.019
65 267077_at AT2G40970 MYBC1 -0.259 0.149
66 267240_at AT2G02680 [Cysteine/Histidine-rich C1 domain family protein] -0.251 -0.403
67 248942_at AT5G45480 unknown -0.248 -0.195
68 265480_at AT2G15970 ATCOR413-PM1, ARABIDOPSIS THALIANA COLD-REGULATED413 PLASMA MEMBRANE 1, ATCYP19, CYCLOPHILLIN 19, COR413-PM1, cold regulated 413 plasma membrane 1, FL3-5A3, WCOR413, WCOR413-LIKE -0.244 -0.074
69 246108_at AT5G28630 [glycine-rich protein] -0.243 -0.274
70 262378_at AT1G72830 ATHAP2C, HAP2C, NF-YA3, nuclear factor Y, subunit A3 -0.240 -0.017
71 265355_at AT2G16760 [Calcium-dependent phosphotriesterase superfamily protein] -0.239 -0.116
72 254971_at AT4G10380 AtNIP5;1, NIP5;1, NOD26-like intrinsic protein 5;1, NLM6, NOD26-LIKE MIP 6, NLM8, NOD26-LIKE MIP 8 -0.238 -0.009
73 258603_at AT3G02990 ATHSFA1E, heat shock transcription factor A1E, HSFA1E, heat shock transcription factor A1E -0.237 0.017
74 249184_at AT5G43020 [Leucine-rich repeat protein kinase family protein] -0.230 -0.025
75 247193_at AT5G65380 [MATE efflux family protein] -0.230 0.032
76 261895_at AT1G80830 ATNRAMP1, NRAMP1, natural resistance-associated macrophage protein 1, PMIT1 -0.230 0.059
77 250905_at AT5G03640 [Protein kinase superfamily protein] -0.228 -0.080
78 264517_at AT1G10120 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.225 0.036
79 257314_at AT3G26590 [MATE efflux family protein] -0.223 -0.093
80 253741_at AT4G28890 [RING/U-box superfamily protein] -0.222 -0.484
81 257544_at AT3G20880 WIP4, WIP domain protein 4 -0.217 0.041