4.0:Information of module
HRE1-RNAi20 normoxia
In comparison with 6-trichlorophenoxyacetic acid 3 h  help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0008643 carbohydrate transport BP 5.828e-04
GO:0071214 cellular response to abiotic stimulus BP 1.377e-03
GO:0006721 terpenoid metabolic process BP 3.834e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010033 response to organic substance BP 5.532e-06
GO:0009074 aromatic amino acid family catabolic pro... BP 2.112e-05
GO:0043207 response to external biotic stimulus BP 2.563e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
HRE1-RNAi20 normoxia		 Log2 signal ratio
6-trichlorophenoxyacetic acid 3 h
1 250135_at AT5G15360 unknown 0.251 -0.026
2 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.191 -0.086
3 258945_at AT3G10660 ATCPK2, CPK2, calmodulin-domain protein kinase cdpk isoform 2 0.186 -0.012
4 248545_at AT5G50260 CEP1, cysteine endopeptidase 1 0.185 -0.136
5 263169_at AT1G03010 [Phototropic-responsive NPH3 family protein] 0.168 0.017
6 250624_at AT5G07330 unknown 0.164 0.039
7 249868_at AT5G23030 TET12, tetraspanin12 0.142 -0.240
8 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 0.138 -0.094
9 261133_at AT1G19715 [Mannose-binding lectin superfamily protein] 0.136 0.036
10 263690_at AT1G26960 AtHB23, homeobox protein 23, HB23, homeobox protein 23 0.132 -0.068
11 247921_at AT5G57660 ATCOL5, BBX6, B-box domain protein 6, COL5, CONSTANS-like 5 0.128 -0.040
12 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.125 -0.095
13 247853_at AT5G58140 NPL1, NON PHOTOTROPIC HYPOCOTYL 1-LIKE, PHOT2, phototropin 2 0.122 -0.000
14 266396_at AT2G38790 unknown 0.116 -0.086
15 258013_at AT3G19320 [Leucine-rich repeat (LRR) family protein] 0.115 -0.082
16 260242_at AT1G63650 AtEGL3, ATMYC-2, EGL1, EGL3, ENHANCER OF GLABRA 3 0.112 0.024
17 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 0.111 -0.041
18 247231_at AT5G65230 AtMYB53, myb domain protein 53, MYB53, myb domain protein 53 0.110 -0.013
19 255345_at AT4G04460 [Saposin-like aspartyl protease family protein] 0.108 -0.046
20 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 0.104 -0.116
21 250665_at AT5G06980 LNK4, night light-inducible and clock-regulated 4 0.104 0.029
22 263494_at AT2G42590 GF14 MU, GRF9, general regulatory factor 9 -0.691 0.003
23 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.393 0.037
24 254832_at AT4G12490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.224 0.096
25 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 -0.200 0.650
26 266743_at AT2G02990 ATRNS1, RIBONUCLEASE 1, RNS1, ribonuclease 1 -0.197 0.422
27 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.189 -0.054
28 265559_at AT2G05530 [Glycine-rich protein family] -0.180 0.029
29 265560_at AT2G05520 ATGRP-3, GLYCINE-RICH PROTEIN 3, ATGRP3, ARABIDOPSIS GLYCINE RICH PROTEIN 3, GRP-3, glycine-rich protein 3, GRP3, GLYCINE-RICH PROTEIN 3 -0.165 -0.006
30 245082_at AT2G23270 unknown -0.163 0.053
31 254954_at AT4G10910 unknown -0.161 -0.005
32 253054_at AT4G37580 COP3, CONSTITUTIVE PHOTOMORPHOGENIC 3, HLS1, HOOKLESS 1, UNS2, UNUSUAL SUGAR RESPONSE 2 -0.159 0.074
33 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 -0.149 0.001
34 266658_at AT2G25735 unknown -0.145 0.157
35 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 -0.134 -0.050
36 254867_at AT4G12240 [zinc finger (C2H2 type) family protein] -0.130 0.082
37 257206_at AT3G16530 [Legume lectin family protein] -0.130 0.074
38 249459_at AT5G39580 [Peroxidase superfamily protein] -0.128 0.008
39 266930_at AT2G45930 unknown -0.124 -0.005
40 261714_at AT1G18510 TET16, tetraspanin 16 -0.124 -0.004
41 245656_at AT1G56620 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.124 0.050
42 246574_at AT1G31670 [Copper amine oxidase family protein] -0.124 0.070