4.0:Information of module
cat2-long-day 4d
In comparison with cat2-2; 8h switch to ambient CO2 concentrations; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006520 cellular amino acid metabolic process BP 3.502e-04
GO:0010583 response to cyclopentenone BP 4.412e-04
GO:0009407 toxin catabolic process BP 8.248e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009414 response to water deprivation BP 1.906e-07
GO:0009415 response to water BP 2.804e-07
GO:0033993 response to lipid BP 2.988e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
cat2-long-day 4d		 Log2 signal ratio
cat2-2; 8h switch to ambient CO2 concentrations;
1 251772_at AT3G55920 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 0.911 0.917
2 262719_at AT1G43590 unknown 0.464 0.049
3 257670_at AT3G20340 unknown 0.456 0.584
4 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.379 -0.022
5 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.352 0.325
6 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.346 0.435
7 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 0.335 0.177
8 255543_at AT4G01870 [tolB protein-related] 0.334 0.438
9 248037_at AT5G55930 ATOPT1, ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 1, OPT1, oligopeptide transporter 1 0.332 0.169
10 254384_at AT4G21870 [HSP20-like chaperones superfamily protein] 0.321 -0.075
11 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 0.320 -0.003
12 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.310 0.274
13 262196_at AT1G77870 MUB5, membrane-anchored ubiquitin-fold protein 5 precursor 0.282 0.172
14 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.277 0.912
15 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 0.274 0.224
16 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 0.270 -0.065
17 263402_at AT2G04050 [MATE efflux family protein] 0.258 0.093
18 255732_at AT1G25450 CER60, ECERIFERUM 60, KCS5, 3-ketoacyl-CoA synthase 5 0.257 0.007
19 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.245 0.152
20 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.226 0.088
21 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.226 -0.136
22 251584_at AT3G58620 TTL4, tetratricopetide-repeat thioredoxin-like 4 0.214 0.066
23 257985_at AT3G20810 JMJ30, Jumonji C domain-containing protein 30, JMJD5, jumonji domain containing 5 0.187 -0.040
24 254609_at AT4G18970 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.185 -0.096
25 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.174 -0.049
26 261548_at AT1G63480 AHL12, AT-hook motif nuclear localized protein 12 0.172 0.002
27 266805_at AT2G30010 TBL45, TRICHOME BIREFRINGENCE-LIKE 45 0.168 -0.069
28 253174_at AT4G35090 CAT2, catalase 2 -0.627 -0.640
29 251743_at AT3G55890 [Yippee family putative zinc-binding protein] -0.604 -0.127
30 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.411 -0.121
31 250485_at AT5G09990 PROPEP5, elicitor peptide 5 precursor -0.363 -0.147
32 246522_at AT5G15830 AtbZIP3, basic leucine-zipper 3, bZIP3, basic leucine-zipper 3 -0.302 -0.050
33 245384_at AT4G16790 [hydroxyproline-rich glycoprotein family protein] -0.301 0.102
34 248333_at AT5G52390 [PAR1 protein] -0.294 -0.010
35 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.285 0.050
36 249626_at AT5G37540 [Eukaryotic aspartyl protease family protein] -0.282 0.065
37 256114_at AT1G16850 unknown -0.263 -0.064
38 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) -0.263 0.008
39 254066_at AT4G25480 ATCBF3, CBF3, C-REPEAT BINDING FACTOR 3, DREB1A, dehydration response element B1A -0.239 -0.106
40 261881_at AT1G80760 NIP6, NIP6;1, NOD26-like intrinsic protein 6;1, NLM7 -0.231 -0.063
41 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 -0.231 0.052
42 260805_at AT1G78320 ATGSTU23, glutathione S-transferase TAU 23, GSTU23, glutathione S-transferase TAU 23 -0.230 -0.029
43 257678_at AT3G20420 ATRTL2, RNASEIII-LIKE 2, RTL2, RNAse THREE-like protein 2 -0.230 -0.129
44 260380_at AT1G73870 BBX16, B-box domain protein 16, COL7, CONSTANS-LIKE 7 -0.228 -0.025
45 254735_at AT4G13810 AtRLP47, receptor like protein 47, RLP47, receptor like protein 47 -0.217 -0.047
46 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 -0.211 0.059
47 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 -0.203 0.026
48 256529_at AT1G33260 [Protein kinase superfamily protein] -0.201 0.027
49 253113_at AT4G35985 [Senescence/dehydration-associated protein-related] -0.198 -0.016
50 252083_at AT3G51960 ATBZIP24, basic leucine zipper 24, BZIP24, basic leucine zipper 24 -0.174 -0.105
51 247358_at AT5G63580 ATFLS2, FLS2, flavonol synthase 2 -0.173 0.104
52 265978_at AT2G11140 [copia-like retrotransposon family, has a 1.0e-71 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.171 -0.002
53 261212_at AT1G12880 atnudt12, nudix hydrolase homolog 12, NUDT12, nudix hydrolase homolog 12 -0.162 0.007