4.0:Information of module
cat2-long-day 2d
In comparison with Light 3day wt help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 1.371e-26
GO:0009451 RNA modification BP 1.190e-17
GO:0006412 translation BP 1.521e-14
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 1.089e-36
GO:0043207 response to external biotic stimulus BP 1.727e-36
GO:0051707 response to other organism BP 1.727e-36
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
cat2-long-day 2d		 Log2 signal ratio
Light 3day wt
1 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.865 -1.994
2 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 0.826 0.700
3 251772_at AT3G55920 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 0.813 0.242
4 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 0.702 -1.919
5 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] 0.601 -0.119
6 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.571 0.553
7 248812_at AT5G47330 [alpha/beta-Hydrolases superfamily protein] 0.529 1.372
8 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.497 -1.248
9 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.490 -0.295
10 250152_at AT5G15120 unknown 0.485 -0.585
11 247718_at AT5G59310 LTP4, lipid transfer protein 4 0.457 0.387
12 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.452 1.157
13 260522_x_at AT2G41730 unknown 0.450 -0.300
14 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.450 -0.812
15 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 0.435 0.126
16 257670_at AT3G20340 unknown 0.434 0.015
17 263073_at AT2G17500 [Auxin efflux carrier family protein] 0.418 -0.417
18 266752_at AT2G47000 ABCB4, ATP-binding cassette B4, AtABCB4, ATPGP4, ARABIDOPSIS P-GLYCOPROTEIN 4, MDR4, MULTIDRUG RESISTANCE 4, PGP4, P-GLYCOPROTEIN 4 0.414 -0.759
19 262719_at AT1G43590 unknown 0.350 0.749
20 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 0.344 1.223
21 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.337 -0.515
22 262935_at AT1G79410 AtOCT5, organic cation/carnitine transporter5, OCT5, organic cation/carnitine transporter5 0.334 0.372
23 254016_at AT4G26150 CGA1, cytokinin-responsive gata factor 1, GATA22, GATA TRANSCRIPTION FACTOR 22, GNL, GNC-LIKE 0.321 0.115
24 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 0.319 0.669
25 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform 0.305 -0.469
26 246403_at AT1G57590 [Pectinacetylesterase family protein] 0.302 -1.057
27 257547_at AT3G13000 unknown 0.283 0.038
28 258209_at AT3G14060 unknown 0.280 0.776
29 250365_at AT5G11410 [Protein kinase superfamily protein] 0.262 0.965
30 248607_at AT5G49480 ATCP1, Ca2+-binding protein 1, CP1, Ca2+-binding protein 1 0.253 0.680
31 248801_at AT5G47370 HAT2 0.243 0.396
32 267266_at AT2G23150 ATNRAMP3, NRAMP3, natural resistance-associated macrophage protein 3 0.236 0.166
33 267349_at AT2G40010 [Ribosomal protein L10 family protein] 0.234 0.485
34 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] 0.232 0.006
35 261636_at AT1G50110 [D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein] 0.232 -0.815
36 254384_at AT4G21870 [HSP20-like chaperones superfamily protein] 0.231 -0.011
37 247109_at AT5G65870 ATPSK5, phytosulfokine 5 precursor, PSK5, PSK5, phytosulfokine 5 precursor 0.229 0.522
38 264025_at AT2G21050 LAX2, like AUXIN RESISTANT 2 0.220 0.176
39 248037_at AT5G55930 ATOPT1, ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 1, OPT1, oligopeptide transporter 1 0.220 -0.650
40 257900_at AT3G28420 [Putative membrane lipoprotein] 0.220 1.064
41 262196_at AT1G77870 MUB5, membrane-anchored ubiquitin-fold protein 5 precursor 0.218 0.515
42 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 0.213 -0.909
43 247488_at AT5G61820 unknown 0.208 0.342
44 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase 0.200 -0.404
45 263515_at AT2G21640 unknown 0.200 0.119
46 245362_at AT4G17460 HAT1, JAB, JAIBA 0.199 0.076
47 258033_at AT3G21250 ABCC8, ATP-binding cassette C8, ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6 0.189 0.362
48 266778_at AT2G29090 CYP707A2, cytochrome P450, family 707, subfamily A, polypeptide 2 0.187 0.555
49 251584_at AT3G58620 TTL4, tetratricopetide-repeat thioredoxin-like 4 0.182 -0.261
50 251235_at AT3G62860 [alpha/beta-Hydrolases superfamily protein] 0.182 -0.027
51 246463_at AT5G16970 AER, alkenal reductase, AT-AER, alkenal reductase 0.179 -0.059
52 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 0.174 0.163
53 245692_at AT5G04150 BHLH101 0.171 0.196
54 266296_at AT2G29420 ATGSTU7, glutathione S-transferase tau 7, GST25, GLUTATHIONE S-TRANSFERASE 25, GSTU7, glutathione S-transferase tau 7 0.169 0.299
55 263473_at AT2G31750 UGT74D1, UDP-glucosyl transferase 74D1 0.169 0.240
56 267319_at AT2G34660 ABCC2, ATP-binding cassette C2, AtABCC2, Arabidopsis thaliana ATP-binding cassette C2, ATMRP2, multidrug resistance-associated protein 2, EST4, MRP2, multidrug resistance-associated protein 2 0.168 0.299
57 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.167 -0.040
58 263002_at AT1G54200 unknown 0.165 0.794
59 251317_at AT3G61490 [Pectin lyase-like superfamily protein] 0.164 0.162
60 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 -1.025 1.476
61 266989_at AT2G39330 JAL23, jacalin-related lectin 23 -0.579 0.761
62 253174_at AT4G35090 CAT2, catalase 2 -0.560 0.312
63 264648_at AT1G09080 BIP3, binding protein 3 -0.546 -5.789
64 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 -0.539 -4.893
65 249896_at AT5G22530 unknown -0.500 -3.854
66 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 -0.448 -5.395
67 247293_at AT5G64510 TIN1, tunicamycin induced 1 -0.428 -3.513
68 252200_at AT3G50280 [HXXXD-type acyl-transferase family protein] -0.425 -0.515
69 262671_at AT1G76040 CPK29, calcium-dependent protein kinase 29 -0.395 -1.596
70 252060_at AT3G52430 ATPAD4, ARABIDOPSIS PHYTOALEXIN DEFICIENT 4, PAD4, PHYTOALEXIN DEFICIENT 4 -0.376 -0.829
71 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 -0.369 1.284
72 249940_at AT5G22380 anac090, NAC domain containing protein 90, NAC090, NAC domain containing protein 90 -0.364 -4.115
73 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] -0.349 -2.343
74 252921_at AT4G39030 EDS5, ENHANCED DISEASE SUSCEPTIBILITY 5, SCORD3, susceptible to coronatine-deficient Pst DC3000 3, SID1, SALICYLIC ACID INDUCTION DEFICIENT 1 -0.336 -2.241
75 263852_at AT2G04450 ATNUDT6, nudix hydrolase homolog 6, ATNUDX6, Arabidopsis thaliana nucleoside diphosphate linked to some moiety X 6, NUDT6, nudix hydrolase homolog 6, NUDX6, nucleoside diphosphates linked to some moiety X 6 -0.327 -4.246
76 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] -0.320 -1.113
77 254243_at AT4G23210 CRK13, cysteine-rich RLK (RECEPTOR-like protein kinase) 13 -0.305 -2.741
78 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] -0.300 0.487
79 247223_at AT5G65070 AGL69, AGAMOUS-like 69, FCL4, MAF4, MADS AFFECTING FLOWERING 4 -0.300 -0.470
80 248916_at AT5G45840 [Leucine-rich repeat protein kinase family protein] -0.294 0.688
81 254252_at AT4G23310 CRK23, cysteine-rich RLK (RECEPTOR-like protein kinase) 23 -0.287 -2.606
82 267380_at AT2G26170 CYP711A1, cytochrome P450, family 711, subfamily A, polypeptide 1, MAX1, MORE AXILLARY BRANCHES 1 -0.276 -0.110
83 255595_at AT4G01700 [Chitinase family protein] -0.275 -1.798
84 251633_at AT3G57460 [catalytics] -0.271 -2.596
85 256577_at AT3G28220 [TRAF-like family protein] -0.270 1.134
86 249071_at AT5G44050 [MATE efflux family protein] -0.263 0.626
87 252114_at AT3G51450 [Calcium-dependent phosphotriesterase superfamily protein] -0.256 -0.289
88 258445_at AT3G22400 ATLOX5, Arabidopsis thaliana lipoxygenase 5, LOX5 -0.250 -1.738
89 262177_at AT1G74710 ATICS1, ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, EDS16, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, ICS1, ISOCHORISMATE SYNTHASE 1, SID2, SALICYLIC ACID INDUCTION DEFICIENT 2 -0.246 -1.417
90 245253_at AT4G15440 CYP74B2, HPL1, hydroperoxide lyase 1 -0.237 1.525
91 260774_at AT1G78290 SNRK2-8, SNF1-RELATED PROTEIN KINASE 2-8, SNRK2.8, SNF1-RELATED PROTEIN KINASE 2.8, SRK2C, SNF1-RELATED PROTEIN KINASE 2C -0.233 0.246
92 255604_at AT4G01080 TBL26, TRICHOME BIREFRINGENCE-LIKE 26 -0.233 1.050
93 252684_at AT3G44400 [Disease resistance protein (TIR-NBS-LRR class) family] -0.228 -0.684
94 255319_at AT4G04220 AtRLP46, receptor like protein 46, RLP46, receptor like protein 46 -0.227 -0.362
95 250994_at AT5G02490 AtHsp70-2, Hsp70-2 -0.221 -3.574
96 259383_at AT3G16470 JAL35, jacalin-related lectin 35, JR1, JASMONATE RESPONSIVE 1 -0.221 0.227
97 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 -0.220 1.396
98 264867_at AT1G24150 ATFH4, FORMIN HOMOLOGUE 4, FH4, formin homologue 4 -0.218 -1.319
99 261826_at AT1G11580 ATPMEPCRA, PMEPCRA, methylesterase PCR A -0.217 -0.152
100 261167_at AT1G04980 ATPDI10, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 10, ATPDIL2-2, PDI-like 2-2, PDI10, PROTEIN DISULFIDE ISOMERASE, PDIL2-2, PDI-like 2-2 -0.207 -1.848
101 253915_at AT4G27280 [Calcium-binding EF-hand family protein] -0.205 -0.770
102 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 -0.205 0.164
103 253842_at AT4G27860 MEB1, MEMBRANE OF ER BODY 1 -0.202 0.455
104 267425_at AT2G34810 [FAD-binding Berberine family protein] -0.202 0.716
105 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 -0.201 -2.207
106 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A -0.201 -0.225
107 255877_at AT2G40460 [Major facilitator superfamily protein] -0.198 0.843
108 254093_at AT4G25110 AtMC2, metacaspase 2, AtMCP1c, metacaspase 1c, MC2, metacaspase 2, MCP1c, metacaspase 1c -0.194 -1.802
109 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.194 -0.363
110 249932_at AT5G22390 unknown -0.193 0.291
111 255254_at AT4G05030 [Copper transport protein family] -0.192 -1.222
112 256529_at AT1G33260 [Protein kinase superfamily protein] -0.192 0.506
113 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 -0.189 -1.845
114 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor -0.189 -0.443
115 266737_at AT2G47140 AtSDR5, SDR5, short-chain dehydrogenase reductase 5 -0.189 -3.500
116 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 -0.185 -2.199
117 256489_at AT1G31550 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.179 -0.243