4.0:Information of module
ABA SA 24h
In comparison with root callus inducing medium 24h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001101 response to acid chemical BP 3.477e-10
GO:0009415 response to water BP 3.341e-09
GO:0042221 response to chemical BP 3.717e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1903047 mitotic cell cycle process BP 1.382e-52
GO:0000911 cytokinesis by cell plate formation BP 6.783e-48
GO:0007049 cell cycle BP 1.662e-47
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ABA SA 24h		 Log2 signal ratio
root callus inducing medium 24h
1 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.714 -0.413
2 261221_at AT1G19960 unknown 1.475 -0.515
3 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 1.386 0.209
4 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 1.371 -1.201
5 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 1.355 -0.365
6 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 1.322 -0.088
7 265672_at AT2G31980 AtCYS2, PHYTOCYSTATIN 2, CYS2, PHYTOCYSTATIN 2 1.290 -0.350
8 264861_at AT1G24320 [Six-hairpin glycosidases superfamily protein] 1.254 -0.495
9 260408_at AT1G69880 ATH8, thioredoxin H-type 8, TH8, thioredoxin H-type 8 1.233 0.417
10 254413_at AT4G21440 ATM4, A. THALIANA MYB 4, ATMYB102, MYB-like 102, MYB102, MYB102, MYB-like 102 1.223 -0.008
11 258064_at AT3G14680 CYP72A14, cytochrome P450, family 72, subfamily A, polypeptide 14 1.203 0.043
12 249917_at AT5G22460 [alpha/beta-Hydrolases superfamily protein] 1.193 -0.000
13 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 1.178 0.254
14 262448_at AT1G49450 [Transducin/WD40 repeat-like superfamily protein] 1.169 0.095
15 250366_at AT5G11420 unknown 1.146 -0.449
16 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 1.141 0.112
17 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 1.103 -0.074
18 257673_at AT3G20370 [TRAF-like family protein] 1.067 0.096
19 247727_at AT5G59490 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 1.063 -0.879
20 261323_at AT1G44760 [Adenine nucleotide alpha hydrolases-like superfamily protein] 1.060 -0.267
21 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 1.037 -0.111
22 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 1.032 -0.326
23 255032_at AT4G09500 [UDP-Glycosyltransferase superfamily protein] 1.024 0.110
24 245035_at AT2G26400 ARD, ACIREDUCTONE DIOXYGENASE, ARD3, acireductone dioxygenase 3, ATARD3, acireductone dioxygenase 3 1.008 -0.695
25 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) 1.006 -0.001
26 257480_at AT1G15640 unknown 0.999 -0.294
27 247902_at AT5G57350 AHA3, H(+)-ATPase 3, ATAHA3, ARABIDOPSIS THALIANA ARABIDOPSIS H(+)-ATPASE, HA3, H(+)-ATPase 3 0.997 -0.160
28 247421_at AT5G62800 [Protein with RING/U-box and TRAF-like domains] 0.996 -0.103
29 267559_at AT2G45570 CYP76C2, cytochrome P450, family 76, subfamily C, polypeptide 2 0.990 0.428
30 260039_at AT1G68795 CLE12, CLAVATA3/ESR-RELATED 12 0.983 -0.273
31 257810_at AT3G27070 TOM20-1, translocase outer membrane 20-1 0.956 -0.129
32 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 0.944 -0.023
33 246215_at AT4G37180 [Homeodomain-like superfamily protein] 0.935 -0.172
34 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 0.935 0.227
35 255723_at AT3G29575 AFP3, ABI five binding protein 3 0.931 -0.005
36 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 0.913 -0.451
37 247657_at AT5G59845 [Gibberellin-regulated family protein] 0.902 -0.040
38 267496_at AT2G30550 DALL3, DAD1-Like Lipase 3 0.900 -0.140
39 254697_at AT4G17970 ALMT12, aluminum-activated, malate transporter 12, ATALMT12, QUAC1, quick-activating anion channel 1 0.899 -0.257
40 252368_at AT3G48520 CYP94B3, cytochrome P450, family 94, subfamily B, polypeptide 3 0.886 -0.221
41 250690_at AT5G06530 ABCG22, ATP-binding cassette G22, AtABCG22, Arabidopsis thaliana ATP-binding cassette G22 0.860 0.006
42 245319_at AT4G16146 [cAMP-regulated phosphoprotein 19-related protein] 0.857 -0.079
43 258037_at AT3G21230 4CL5, 4-coumarate:CoA ligase 5 0.827 -0.217
44 252073_at AT3G51750 unknown 0.827 0.062
45 250942_at AT5G03350 [Legume lectin family protein] 0.821 -0.139
46 260567_at AT2G43820 ATSAGT1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, GT, SAGT1, salicylic acid glucosyltransferase 1, SGT1, UDP-glucose:salicylic acid glucosyltransferase 1, UGT74F2, UDP-glucosyltransferase 74F2 0.818 0.009
47 245993_at AT5G20700 unknown 0.814 -0.061
48 247038_at AT5G67160 EPS1, ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 0.811 0.028
49 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 0.811 -0.378
50 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.801 -0.174
51 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 0.798 0.186
52 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.786 0.047
53 257798_at AT3G15950 NAI2 0.779 0.124
54 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.778 -0.458
55 249757_at AT5G24316 [proline-rich family protein] 0.774 0.177
56 245885_at AT5G09440 EXL4, EXORDIUM like 4 0.774 -0.262
57 259789_at AT1G29395 COR413-TM1, COLD REGULATED 314 THYLAKOID MEMBRANE 1, COR413IM1, COLD REGULATED 314 INNER MEMBRANE 1, COR414-TM1, cold regulated 414 thylakoid membrane 1 0.773 -0.085
58 260278_at AT1G80590 ATWRKY66, WRKY66, WRKY DNA-binding protein 66 0.763 -0.528
59 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase 0.762 0.153
60 249941_at AT5G22270 unknown 0.758 0.260
61 253017_at AT4G37970 ATCAD6, CAD6, cinnamyl alcohol dehydrogenase 6 0.728 0.065
62 264532_at AT1G55740 AtSIP1, seed imbibition 1, RS1, raffinose synthase 1, SIP1, seed imbibition 1 0.713 -0.430
63 255521_at AT4G02280 ATSUS3, SUS3, sucrose synthase 3 0.713 0.611
64 249033_at AT5G44920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.709 -0.273
65 260568_at AT2G43570 CHI, chitinase, putative 0.707 -0.098
66 251019_at AT5G02420 unknown 0.707 0.134
67 264894_at AT1G23040 [hydroxyproline-rich glycoprotein family protein] 0.705 0.213
68 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.704 0.546
69 255460_at AT4G02800 unknown -1.119 0.535
70 263607_at AT2G16270 unknown -1.111 0.303
71 256926_at AT3G22540 unknown -1.103 0.272
72 248963_at AT5G45700 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -1.073 0.600
73 264763_at AT1G61450 unknown -1.032 0.077
74 254233_at AT4G23800 3xHMG-box2, 3xHigh Mobility Group-box2 -1.024 0.199
75 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 -1.010 0.394
76 252763_at AT3G42725 [Putative membrane lipoprotein] -1.006 0.406
77 247425_at AT5G62550 unknown -0.991 0.269
78 255265_at AT4G05190 ATK5, kinesin 5 -0.989 0.431
79 257740_at AT3G27330 [zinc finger (C3HC4-type RING finger) family protein] -0.981 0.364
80 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.966 0.276
81 250228_at AT5G13840 CCS52B, cell cycle switch protein 52 B, FZR3, FIZZY-related 3 -0.959 0.163
82 247962_at AT5G56580 ANQ1, ARABIDOPSIS NQK1, ATMKK6, ARABIDOPSIS THALIANA MAP KINASE KINASE 6, MKK6, MAP kinase kinase 6 -0.938 0.237
83 248057_at AT5G55520 unknown -0.934 0.314
84 259930_at AT1G34355 ATPS1, PARALLEL SPINDLE 1, PS1, PARALLEL SPINDLE 1 -0.916 0.244
85 258464_at AT3G17360 POK1, phragmoplast orienting kinesin 1 -0.901 0.074
86 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 -0.897 0.320
87 259686_at AT1G63100 [GRAS family transcription factor] -0.896 0.124
88 259151_at AT3G10310 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] -0.894 0.218
89 248055_at AT5G55830 LecRK-S.7, L-type lectin receptor kinase S.7 -0.889 0.476
90 252691_at AT3G44050 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.875 0.363
91 261840_at AT1G16070 AtTLP8, tubby like protein 8, TLP8, tubby like protein 8 -0.873 0.187
92 265085_at AT1G03780 AtTPX2, TPX2, targeting protein for XKLP2 -0.869 0.283
93 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.868 -0.203
94 259851_at AT1G72250 [Di-glucose binding protein with Kinesin motor domain] -0.868 0.137
95 267618_at AT2G26760 CYCB1;4, Cyclin B1;4 -0.868 0.305
96 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 -0.867 0.344
97 253978_at AT4G26660 unknown -0.867 0.594
98 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 -0.866 0.304
99 262802_at AT1G20930 CDKB2;2, cyclin-dependent kinase B2;2 -0.863 0.068
100 247603_at AT5G60930 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.863 0.255
101 267636_at AT2G42110 unknown -0.860 0.172
102 264377_at AT2G25060 AtENODL14, ENODL14, early nodulin-like protein 14 -0.856 0.162
103 247039_at AT5G67270 ATEB1C, MICROTUBULE END BINDING PROTEIN 1, ATEB1H1, ATEB1-HOMOLOG1, EB1C, end binding protein 1C -0.856 0.316
104 253403_at AT4G32830 AtAUR1, ataurora1, AUR1, ataurora1 -0.853 0.251
105 246415_at AT5G17160 unknown -0.845 0.341
106 253148_at AT4G35620 CYCB2;2, Cyclin B2;2 -0.843 0.596
107 257115_at AT3G20150 [Kinesin motor family protein] -0.837 0.066
108 254964_at AT4G11080 3xHMG-box1, 3xHigh Mobility Group-box1 -0.829 0.138
109 251067_at AT5G01910 unknown -0.826 0.574
110 262081_at AT1G59540 ZCF125 -0.823 0.303
111 245688_at AT1G28290 AGP31, arabinogalactan protein 31 -0.820 0.017
112 245739_at AT1G44110 CYCA1;1, Cyclin A1;1 -0.812 0.410
113 252089_at AT3G52110 unknown -0.811 0.097
114 248619_at AT5G49630 AAP6, amino acid permease 6 -0.805 -0.057
115 258067_at AT3G25980 AtMAD2, MAD2, MITOTIC ARREST-DEFICIENT 2 -0.804 0.192
116 264815_at AT1G03620 [ELMO/CED-12 family protein] -0.794 -0.000
117 256864_at AT3G23890 ATTOPII, TOPII, topoisomerase II -0.788 0.193
118 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 -0.782 0.273
119 258376_at AT3G17680 [Kinase interacting (KIP1-like) family protein] -0.777 0.063
120 261660_at AT1G18370 ATNACK1, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, HIK, HINKEL, NACK1, NPK1-ACTIVATING KINESIN 1 -0.762 0.571
121 260032_at AT1G68750 ATPPC4, phosphoenolpyruvate carboxylase 4, PPC4, phosphoenolpyruvate carboxylase 4 -0.759 0.089
122 248413_at AT5G51600 ATMAP65-3, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, MAP65-3, MICROTUBULE-ASSOCIATED PROTEIN 65-3, PLE, PLEIADE -0.759 0.238
123 259978_at AT1G76540 CDKB2;1, cyclin-dependent kinase B2;1 -0.750 0.234
124 248691_at AT5G48310 unknown -0.744 0.275
125 261198_at AT1G12940 ATNRT2.5, nitrate transporter2.5, NRT2.5, nitrate transporter2.5 -0.744 -0.049
126 245607_at AT4G14330 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.736 0.276
127 249644_at AT5G37010 unknown -0.735 0.313
128 250386_at AT5G11510 AtMYB3R4, myb domain protein 3R4, MYB3R-4, myb domain protein 3r-4 -0.733 0.244
129 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 -0.731 0.346
130 261364_at AT1G53140 DRP5A, Dynamin related protein 5A -0.725 0.302
131 258796_at AT3G04630 WDL1, WVD2-like 1 -0.725 0.099
132 255410_at AT4G03100 [Rho GTPase activating protein with PAK-box/P21-Rho-binding domain] -0.724 0.302
133 253757_at AT4G28950 ARAC7, Arabidopsis RAC-like 7, ATRAC7, ATROP9, RAC7, ROP9, RHO-related protein from plants 9 -0.719 0.480
134 258471_at AT3G06030 ANP3, NPK1-related protein kinase 3, AtANP3, MAPKKK12, NP3, NPK1-related protein kinase 3 -0.716 0.166
135 253804_at AT4G28230 unknown -0.714 0.587