4.0:Information of module
ABA SA 24h
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001101 response to acid chemical BP 3.477e-10
GO:0009415 response to water BP 3.341e-09
GO:0042221 response to chemical BP 3.717e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1903047 mitotic cell cycle process BP 1.382e-52
GO:0000911 cytokinesis by cell plate formation BP 6.783e-48
GO:0007049 cell cycle BP 1.662e-47
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ABA SA 24h		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.714 0.240
2 261221_at AT1G19960 unknown 1.475 0.375
3 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 1.386 0.024
4 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 1.371 0.215
5 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 1.355 0.638
6 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 1.322 1.076
7 265672_at AT2G31980 AtCYS2, PHYTOCYSTATIN 2, CYS2, PHYTOCYSTATIN 2 1.290 1.007
8 264861_at AT1G24320 [Six-hairpin glycosidases superfamily protein] 1.254 -1.191
9 260408_at AT1G69880 ATH8, thioredoxin H-type 8, TH8, thioredoxin H-type 8 1.233 -0.221
10 254413_at AT4G21440 ATM4, A. THALIANA MYB 4, ATMYB102, MYB-like 102, MYB102, MYB102, MYB-like 102 1.223 -1.141
11 258064_at AT3G14680 CYP72A14, cytochrome P450, family 72, subfamily A, polypeptide 14 1.203 -0.949
12 249917_at AT5G22460 [alpha/beta-Hydrolases superfamily protein] 1.193 0.459
13 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 1.178 1.816
14 262448_at AT1G49450 [Transducin/WD40 repeat-like superfamily protein] 1.169 -0.024
15 250366_at AT5G11420 unknown 1.146 0.643
16 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 1.141 0.519
17 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 1.103 -0.853
18 257673_at AT3G20370 [TRAF-like family protein] 1.067 0.827
19 247727_at AT5G59490 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 1.063 -0.235
20 261323_at AT1G44760 [Adenine nucleotide alpha hydrolases-like superfamily protein] 1.060 -0.207
21 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 1.037 0.584
22 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 1.032 -0.973
23 255032_at AT4G09500 [UDP-Glycosyltransferase superfamily protein] 1.024 -1.069
24 245035_at AT2G26400 ARD, ACIREDUCTONE DIOXYGENASE, ARD3, acireductone dioxygenase 3, ATARD3, acireductone dioxygenase 3 1.008 0.355
25 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) 1.006 -0.095
26 257480_at AT1G15640 unknown 0.999 -0.699
27 247902_at AT5G57350 AHA3, H(+)-ATPase 3, ATAHA3, ARABIDOPSIS THALIANA ARABIDOPSIS H(+)-ATPASE, HA3, H(+)-ATPase 3 0.997 0.822
28 247421_at AT5G62800 [Protein with RING/U-box and TRAF-like domains] 0.996 -0.635
29 267559_at AT2G45570 CYP76C2, cytochrome P450, family 76, subfamily C, polypeptide 2 0.990 -0.889
30 260039_at AT1G68795 CLE12, CLAVATA3/ESR-RELATED 12 0.983 0.023
31 257810_at AT3G27070 TOM20-1, translocase outer membrane 20-1 0.956 -0.506
32 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 0.944 -1.011
33 246215_at AT4G37180 [Homeodomain-like superfamily protein] 0.935 0.922
34 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 0.935 -0.528
35 255723_at AT3G29575 AFP3, ABI five binding protein 3 0.931 0.622
36 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 0.913 -0.472
37 247657_at AT5G59845 [Gibberellin-regulated family protein] 0.902 -0.526
38 267496_at AT2G30550 DALL3, DAD1-Like Lipase 3 0.900 -0.306
39 254697_at AT4G17970 ALMT12, aluminum-activated, malate transporter 12, ATALMT12, QUAC1, quick-activating anion channel 1 0.899 -0.341
40 252368_at AT3G48520 CYP94B3, cytochrome P450, family 94, subfamily B, polypeptide 3 0.886 -0.644
41 250690_at AT5G06530 ABCG22, ATP-binding cassette G22, AtABCG22, Arabidopsis thaliana ATP-binding cassette G22 0.860 -0.659
42 245319_at AT4G16146 [cAMP-regulated phosphoprotein 19-related protein] 0.857 -0.280
43 258037_at AT3G21230 4CL5, 4-coumarate:CoA ligase 5 0.827 0.079
44 252073_at AT3G51750 unknown 0.827 -0.274
45 250942_at AT5G03350 [Legume lectin family protein] 0.821 -0.419
46 260567_at AT2G43820 ATSAGT1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, GT, SAGT1, salicylic acid glucosyltransferase 1, SGT1, UDP-glucose:salicylic acid glucosyltransferase 1, UGT74F2, UDP-glucosyltransferase 74F2 0.818 0.295
47 245993_at AT5G20700 unknown 0.814 1.243
48 247038_at AT5G67160 EPS1, ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 0.811 -0.130
49 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 0.811 0.369
50 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.801 -0.746
51 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 0.798 0.273
52 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.786 -0.321
53 257798_at AT3G15950 NAI2 0.779 1.174
54 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.778 1.499
55 249757_at AT5G24316 [proline-rich family protein] 0.774 -0.348
56 245885_at AT5G09440 EXL4, EXORDIUM like 4 0.774 0.210
57 259789_at AT1G29395 COR413-TM1, COLD REGULATED 314 THYLAKOID MEMBRANE 1, COR413IM1, COLD REGULATED 314 INNER MEMBRANE 1, COR414-TM1, cold regulated 414 thylakoid membrane 1 0.773 -1.133
58 260278_at AT1G80590 ATWRKY66, WRKY66, WRKY DNA-binding protein 66 0.763 -0.611
59 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase 0.762 0.044
60 249941_at AT5G22270 unknown 0.758 -0.407
61 253017_at AT4G37970 ATCAD6, CAD6, cinnamyl alcohol dehydrogenase 6 0.728 0.276
62 264532_at AT1G55740 AtSIP1, seed imbibition 1, RS1, raffinose synthase 1, SIP1, seed imbibition 1 0.713 1.283
63 255521_at AT4G02280 ATSUS3, SUS3, sucrose synthase 3 0.713 -0.469
64 249033_at AT5G44920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.709 -0.570
65 260568_at AT2G43570 CHI, chitinase, putative 0.707 0.256
66 251019_at AT5G02420 unknown 0.707 0.361
67 264894_at AT1G23040 [hydroxyproline-rich glycoprotein family protein] 0.705 0.845
68 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.704 -0.272
69 255460_at AT4G02800 unknown -1.119 0.518
70 263607_at AT2G16270 unknown -1.111 -0.396
71 256926_at AT3G22540 unknown -1.103 0.184
72 248963_at AT5G45700 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -1.073 -0.381
73 264763_at AT1G61450 unknown -1.032 0.342
74 254233_at AT4G23800 3xHMG-box2, 3xHigh Mobility Group-box2 -1.024 1.118
75 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 -1.010 -0.756
76 252763_at AT3G42725 [Putative membrane lipoprotein] -1.006 -0.335
77 247425_at AT5G62550 unknown -0.991 -0.498
78 255265_at AT4G05190 ATK5, kinesin 5 -0.989 0.658
79 257740_at AT3G27330 [zinc finger (C3HC4-type RING finger) family protein] -0.981 0.358
80 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.966 0.531
81 250228_at AT5G13840 CCS52B, cell cycle switch protein 52 B, FZR3, FIZZY-related 3 -0.959 -0.277
82 247962_at AT5G56580 ANQ1, ARABIDOPSIS NQK1, ATMKK6, ARABIDOPSIS THALIANA MAP KINASE KINASE 6, MKK6, MAP kinase kinase 6 -0.938 0.653
83 248057_at AT5G55520 unknown -0.934 -0.355
84 259930_at AT1G34355 ATPS1, PARALLEL SPINDLE 1, PS1, PARALLEL SPINDLE 1 -0.916 -0.730
85 258464_at AT3G17360 POK1, phragmoplast orienting kinesin 1 -0.901 -1.045
86 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 -0.897 0.156
87 259686_at AT1G63100 [GRAS family transcription factor] -0.896 -0.359
88 259151_at AT3G10310 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] -0.894 -0.487
89 248055_at AT5G55830 LecRK-S.7, L-type lectin receptor kinase S.7 -0.889 -1.020
90 252691_at AT3G44050 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.875 -0.360
91 261840_at AT1G16070 AtTLP8, tubby like protein 8, TLP8, tubby like protein 8 -0.873 -0.770
92 265085_at AT1G03780 AtTPX2, TPX2, targeting protein for XKLP2 -0.869 -0.501
93 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.868 0.445
94 259851_at AT1G72250 [Di-glucose binding protein with Kinesin motor domain] -0.868 -0.352
95 267618_at AT2G26760 CYCB1;4, Cyclin B1;4 -0.868 0.405
96 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 -0.867 -1.206
97 253978_at AT4G26660 unknown -0.867 -0.207
98 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 -0.866 -0.305
99 262802_at AT1G20930 CDKB2;2, cyclin-dependent kinase B2;2 -0.863 0.437
100 247603_at AT5G60930 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.863 0.184
101 267636_at AT2G42110 unknown -0.860 -0.363
102 264377_at AT2G25060 AtENODL14, ENODL14, early nodulin-like protein 14 -0.856 0.112
103 247039_at AT5G67270 ATEB1C, MICROTUBULE END BINDING PROTEIN 1, ATEB1H1, ATEB1-HOMOLOG1, EB1C, end binding protein 1C -0.856 -0.467
104 253403_at AT4G32830 AtAUR1, ataurora1, AUR1, ataurora1 -0.853 0.212
105 246415_at AT5G17160 unknown -0.845 0.389
106 253148_at AT4G35620 CYCB2;2, Cyclin B2;2 -0.843 -0.009
107 257115_at AT3G20150 [Kinesin motor family protein] -0.837 -0.824
108 254964_at AT4G11080 3xHMG-box1, 3xHigh Mobility Group-box1 -0.829 -0.720
109 251067_at AT5G01910 unknown -0.826 -0.608
110 262081_at AT1G59540 ZCF125 -0.823 -0.544
111 245688_at AT1G28290 AGP31, arabinogalactan protein 31 -0.820 0.723
112 245739_at AT1G44110 CYCA1;1, Cyclin A1;1 -0.812 0.400
113 252089_at AT3G52110 unknown -0.811 0.164
114 248619_at AT5G49630 AAP6, amino acid permease 6 -0.805 -0.343
115 258067_at AT3G25980 AtMAD2, MAD2, MITOTIC ARREST-DEFICIENT 2 -0.804 -0.525
116 264815_at AT1G03620 [ELMO/CED-12 family protein] -0.794 -0.830
117 256864_at AT3G23890 ATTOPII, TOPII, topoisomerase II -0.788 -0.201
118 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 -0.782 0.087
119 258376_at AT3G17680 [Kinase interacting (KIP1-like) family protein] -0.777 0.738
120 261660_at AT1G18370 ATNACK1, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, HIK, HINKEL, NACK1, NPK1-ACTIVATING KINESIN 1 -0.762 0.525
121 260032_at AT1G68750 ATPPC4, phosphoenolpyruvate carboxylase 4, PPC4, phosphoenolpyruvate carboxylase 4 -0.759 -1.024
122 248413_at AT5G51600 ATMAP65-3, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, MAP65-3, MICROTUBULE-ASSOCIATED PROTEIN 65-3, PLE, PLEIADE -0.759 -0.680
123 259978_at AT1G76540 CDKB2;1, cyclin-dependent kinase B2;1 -0.750 -0.419
124 248691_at AT5G48310 unknown -0.744 -0.678
125 261198_at AT1G12940 ATNRT2.5, nitrate transporter2.5, NRT2.5, nitrate transporter2.5 -0.744 -1.143
126 245607_at AT4G14330 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.736 0.108
127 249644_at AT5G37010 unknown -0.735 0.783
128 250386_at AT5G11510 AtMYB3R4, myb domain protein 3R4, MYB3R-4, myb domain protein 3r-4 -0.733 0.079
129 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 -0.731 -0.294
130 261364_at AT1G53140 DRP5A, Dynamin related protein 5A -0.725 0.228
131 258796_at AT3G04630 WDL1, WVD2-like 1 -0.725 0.714
132 255410_at AT4G03100 [Rho GTPase activating protein with PAK-box/P21-Rho-binding domain] -0.724 -0.369
133 253757_at AT4G28950 ARAC7, Arabidopsis RAC-like 7, ATRAC7, ATROP9, RAC7, ROP9, RHO-related protein from plants 9 -0.719 0.069
134 258471_at AT3G06030 ANP3, NPK1-related protein kinase 3, AtANP3, MAPKKK12, NP3, NPK1-related protein kinase 3 -0.716 -0.121
135 253804_at AT4G28230 unknown -0.714 -0.202