4.0:Information of module
ABA SA 24h
In comparison with 4d red light grown hmr-5 seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001101 response to acid chemical BP 3.477e-10
GO:0009415 response to water BP 3.341e-09
GO:0042221 response to chemical BP 3.717e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1903047 mitotic cell cycle process BP 1.382e-52
GO:0000911 cytokinesis by cell plate formation BP 6.783e-48
GO:0007049 cell cycle BP 1.662e-47
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ABA SA 24h		 Log2 signal ratio
4d red light grown hmr-5 seedlings
1 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.714 0.118
2 261221_at AT1G19960 unknown 1.475 0.190
3 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 1.386 0.250
4 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 1.371 0.225
5 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 1.355 -0.131
6 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 1.322 0.143
7 265672_at AT2G31980 AtCYS2, PHYTOCYSTATIN 2, CYS2, PHYTOCYSTATIN 2 1.290 -0.075
8 264861_at AT1G24320 [Six-hairpin glycosidases superfamily protein] 1.254 0.010
9 260408_at AT1G69880 ATH8, thioredoxin H-type 8, TH8, thioredoxin H-type 8 1.233 0.248
10 254413_at AT4G21440 ATM4, A. THALIANA MYB 4, ATMYB102, MYB-like 102, MYB102, MYB102, MYB-like 102 1.223 0.014
11 258064_at AT3G14680 CYP72A14, cytochrome P450, family 72, subfamily A, polypeptide 14 1.203 0.310
12 249917_at AT5G22460 [alpha/beta-Hydrolases superfamily protein] 1.193 0.064
13 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 1.178 0.145
14 262448_at AT1G49450 [Transducin/WD40 repeat-like superfamily protein] 1.169 -0.036
15 250366_at AT5G11420 unknown 1.146 -0.049
16 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 1.141 0.005
17 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 1.103 0.063
18 257673_at AT3G20370 [TRAF-like family protein] 1.067 -0.234
19 247727_at AT5G59490 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 1.063 0.098
20 261323_at AT1G44760 [Adenine nucleotide alpha hydrolases-like superfamily protein] 1.060 0.035
21 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 1.037 0.172
22 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 1.032 0.310
23 255032_at AT4G09500 [UDP-Glycosyltransferase superfamily protein] 1.024 -0.112
24 245035_at AT2G26400 ARD, ACIREDUCTONE DIOXYGENASE, ARD3, acireductone dioxygenase 3, ATARD3, acireductone dioxygenase 3 1.008 0.060
25 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) 1.006 0.178
26 257480_at AT1G15640 unknown 0.999 0.030
27 247902_at AT5G57350 AHA3, H(+)-ATPase 3, ATAHA3, ARABIDOPSIS THALIANA ARABIDOPSIS H(+)-ATPASE, HA3, H(+)-ATPase 3 0.997 0.072
28 247421_at AT5G62800 [Protein with RING/U-box and TRAF-like domains] 0.996 0.079
29 267559_at AT2G45570 CYP76C2, cytochrome P450, family 76, subfamily C, polypeptide 2 0.990 0.030
30 260039_at AT1G68795 CLE12, CLAVATA3/ESR-RELATED 12 0.983 0.088
31 257810_at AT3G27070 TOM20-1, translocase outer membrane 20-1 0.956 0.021
32 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 0.944 -0.226
33 246215_at AT4G37180 [Homeodomain-like superfamily protein] 0.935 0.068
34 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 0.935 0.494
35 255723_at AT3G29575 AFP3, ABI five binding protein 3 0.931 0.108
36 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 0.913 0.364
37 247657_at AT5G59845 [Gibberellin-regulated family protein] 0.902 -0.229
38 267496_at AT2G30550 DALL3, DAD1-Like Lipase 3 0.900 0.099
39 254697_at AT4G17970 ALMT12, aluminum-activated, malate transporter 12, ATALMT12, QUAC1, quick-activating anion channel 1 0.899 -0.080
40 252368_at AT3G48520 CYP94B3, cytochrome P450, family 94, subfamily B, polypeptide 3 0.886 0.309
41 250690_at AT5G06530 ABCG22, ATP-binding cassette G22, AtABCG22, Arabidopsis thaliana ATP-binding cassette G22 0.860 -0.088
42 245319_at AT4G16146 [cAMP-regulated phosphoprotein 19-related protein] 0.857 0.207
43 258037_at AT3G21230 4CL5, 4-coumarate:CoA ligase 5 0.827 -0.237
44 252073_at AT3G51750 unknown 0.827 0.122
45 250942_at AT5G03350 [Legume lectin family protein] 0.821 -0.414
46 260567_at AT2G43820 ATSAGT1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, GT, SAGT1, salicylic acid glucosyltransferase 1, SGT1, UDP-glucose:salicylic acid glucosyltransferase 1, UGT74F2, UDP-glucosyltransferase 74F2 0.818 0.208
47 245993_at AT5G20700 unknown 0.814 -0.025
48 247038_at AT5G67160 EPS1, ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 0.811 -0.083
49 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 0.811 0.155
50 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.801 -0.018
51 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 0.798 0.214
52 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.786 0.307
53 257798_at AT3G15950 NAI2 0.779 -0.005
54 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.778 0.228
55 249757_at AT5G24316 [proline-rich family protein] 0.774 0.091
56 245885_at AT5G09440 EXL4, EXORDIUM like 4 0.774 0.267
57 259789_at AT1G29395 COR413-TM1, COLD REGULATED 314 THYLAKOID MEMBRANE 1, COR413IM1, COLD REGULATED 314 INNER MEMBRANE 1, COR414-TM1, cold regulated 414 thylakoid membrane 1 0.773 0.040
58 260278_at AT1G80590 ATWRKY66, WRKY66, WRKY DNA-binding protein 66 0.763 0.004
59 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase 0.762 0.230
60 249941_at AT5G22270 unknown 0.758 0.185
61 253017_at AT4G37970 ATCAD6, CAD6, cinnamyl alcohol dehydrogenase 6 0.728 -0.006
62 264532_at AT1G55740 AtSIP1, seed imbibition 1, RS1, raffinose synthase 1, SIP1, seed imbibition 1 0.713 0.065
63 255521_at AT4G02280 ATSUS3, SUS3, sucrose synthase 3 0.713 0.341
64 249033_at AT5G44920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.709 0.082
65 260568_at AT2G43570 CHI, chitinase, putative 0.707 0.285
66 251019_at AT5G02420 unknown 0.707 -0.026
67 264894_at AT1G23040 [hydroxyproline-rich glycoprotein family protein] 0.705 0.087
68 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.704 0.291
69 255460_at AT4G02800 unknown -1.119 -0.323
70 263607_at AT2G16270 unknown -1.111 -0.174
71 256926_at AT3G22540 unknown -1.103 -0.057
72 248963_at AT5G45700 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -1.073 -0.275
73 264763_at AT1G61450 unknown -1.032 -0.050
74 254233_at AT4G23800 3xHMG-box2, 3xHigh Mobility Group-box2 -1.024 -0.285
75 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 -1.010 -0.289
76 252763_at AT3G42725 [Putative membrane lipoprotein] -1.006 -0.026
77 247425_at AT5G62550 unknown -0.991 -0.344
78 255265_at AT4G05190 ATK5, kinesin 5 -0.989 -0.251
79 257740_at AT3G27330 [zinc finger (C3HC4-type RING finger) family protein] -0.981 -0.083
80 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.966 -0.088
81 250228_at AT5G13840 CCS52B, cell cycle switch protein 52 B, FZR3, FIZZY-related 3 -0.959 -0.229
82 247962_at AT5G56580 ANQ1, ARABIDOPSIS NQK1, ATMKK6, ARABIDOPSIS THALIANA MAP KINASE KINASE 6, MKK6, MAP kinase kinase 6 -0.938 -0.274
83 248057_at AT5G55520 unknown -0.934 -0.186
84 259930_at AT1G34355 ATPS1, PARALLEL SPINDLE 1, PS1, PARALLEL SPINDLE 1 -0.916 -0.165
85 258464_at AT3G17360 POK1, phragmoplast orienting kinesin 1 -0.901 -0.109
86 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 -0.897 -0.323
87 259686_at AT1G63100 [GRAS family transcription factor] -0.896 -0.166
88 259151_at AT3G10310 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] -0.894 -0.170
89 248055_at AT5G55830 LecRK-S.7, L-type lectin receptor kinase S.7 -0.889 -0.106
90 252691_at AT3G44050 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.875 -0.244
91 261840_at AT1G16070 AtTLP8, tubby like protein 8, TLP8, tubby like protein 8 -0.873 -0.012
92 265085_at AT1G03780 AtTPX2, TPX2, targeting protein for XKLP2 -0.869 -0.180
93 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.868 0.209
94 259851_at AT1G72250 [Di-glucose binding protein with Kinesin motor domain] -0.868 -0.208
95 267618_at AT2G26760 CYCB1;4, Cyclin B1;4 -0.868 -0.136
96 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 -0.867 -0.195
97 253978_at AT4G26660 unknown -0.867 -0.228
98 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 -0.866 -0.160
99 262802_at AT1G20930 CDKB2;2, cyclin-dependent kinase B2;2 -0.863 -0.096
100 247603_at AT5G60930 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.863 -0.197
101 267636_at AT2G42110 unknown -0.860 -0.238
102 264377_at AT2G25060 AtENODL14, ENODL14, early nodulin-like protein 14 -0.856 -0.188
103 247039_at AT5G67270 ATEB1C, MICROTUBULE END BINDING PROTEIN 1, ATEB1H1, ATEB1-HOMOLOG1, EB1C, end binding protein 1C -0.856 -0.224
104 253403_at AT4G32830 AtAUR1, ataurora1, AUR1, ataurora1 -0.853 -0.147
105 246415_at AT5G17160 unknown -0.845 -0.309
106 253148_at AT4G35620 CYCB2;2, Cyclin B2;2 -0.843 -0.108
107 257115_at AT3G20150 [Kinesin motor family protein] -0.837 -0.184
108 254964_at AT4G11080 3xHMG-box1, 3xHigh Mobility Group-box1 -0.829 -0.266
109 251067_at AT5G01910 unknown -0.826 -0.092
110 262081_at AT1G59540 ZCF125 -0.823 -0.258
111 245688_at AT1G28290 AGP31, arabinogalactan protein 31 -0.820 -0.107
112 245739_at AT1G44110 CYCA1;1, Cyclin A1;1 -0.812 -0.167
113 252089_at AT3G52110 unknown -0.811 -0.298
114 248619_at AT5G49630 AAP6, amino acid permease 6 -0.805 -0.176
115 258067_at AT3G25980 AtMAD2, MAD2, MITOTIC ARREST-DEFICIENT 2 -0.804 -0.156
116 264815_at AT1G03620 [ELMO/CED-12 family protein] -0.794 0.306
117 256864_at AT3G23890 ATTOPII, TOPII, topoisomerase II -0.788 -0.261
118 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 -0.782 -0.226
119 258376_at AT3G17680 [Kinase interacting (KIP1-like) family protein] -0.777 -0.178
120 261660_at AT1G18370 ATNACK1, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, HIK, HINKEL, NACK1, NPK1-ACTIVATING KINESIN 1 -0.762 -0.362
121 260032_at AT1G68750 ATPPC4, phosphoenolpyruvate carboxylase 4, PPC4, phosphoenolpyruvate carboxylase 4 -0.759 0.030
122 248413_at AT5G51600 ATMAP65-3, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, MAP65-3, MICROTUBULE-ASSOCIATED PROTEIN 65-3, PLE, PLEIADE -0.759 -0.331
123 259978_at AT1G76540 CDKB2;1, cyclin-dependent kinase B2;1 -0.750 -0.229
124 248691_at AT5G48310 unknown -0.744 -0.174
125 261198_at AT1G12940 ATNRT2.5, nitrate transporter2.5, NRT2.5, nitrate transporter2.5 -0.744 0.050
126 245607_at AT4G14330 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.736 -0.202
127 249644_at AT5G37010 unknown -0.735 -0.165
128 250386_at AT5G11510 AtMYB3R4, myb domain protein 3R4, MYB3R-4, myb domain protein 3r-4 -0.733 -0.243
129 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 -0.731 -0.280
130 261364_at AT1G53140 DRP5A, Dynamin related protein 5A -0.725 -0.133
131 258796_at AT3G04630 WDL1, WVD2-like 1 -0.725 0.084
132 255410_at AT4G03100 [Rho GTPase activating protein with PAK-box/P21-Rho-binding domain] -0.724 -0.302
133 253757_at AT4G28950 ARAC7, Arabidopsis RAC-like 7, ATRAC7, ATROP9, RAC7, ROP9, RHO-related protein from plants 9 -0.719 -0.165
134 258471_at AT3G06030 ANP3, NPK1-related protein kinase 3, AtANP3, MAPKKK12, NP3, NPK1-related protein kinase 3 -0.716 -0.313
135 253804_at AT4G28230 unknown -0.714 -0.205