4.0:Information of module
ABA JA 24h
In comparison with Root submergence 7h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044712 single-organism catabolic process BP 1.601e-09
GO:0019752 carboxylic acid metabolic process BP 8.674e-07
GO:0006082 organic acid metabolic process BP 9.035e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1903047 mitotic cell cycle process BP 5.289e-32
GO:0000278 mitotic cell cycle BP 1.401e-29
GO:0006259 DNA metabolic process BP 7.239e-28
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ABA JA 24h		 Log2 signal ratio
Root submergence 7h
1 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 1.719 0.265
2 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 1.573 0.314
3 259384_at AT3G16450 JAL33, Jacalin-related lectin 33 1.514 0.074
4 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 1.309 0.327
5 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 1.291 0.003
6 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.254 0.310
7 245148_at AT2G45220 PME17, pectin methylesterase 17 1.166 0.122
8 245885_at AT5G09440 EXL4, EXORDIUM like 4 1.142 0.082
9 262616_at AT1G06620 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.133 0.272
10 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 1.085 0.691
11 246215_at AT4G37180 [Homeodomain-like superfamily protein] 1.069 0.179
12 267612_at AT2G26690 AtNPF6.2, NPF6.2, NRT1/ PTR family 6.2 1.065 -0.043
13 266142_at AT2G39030 NATA1, N-acetyltransferase activity 1 1.049 0.041
14 246963_at AT5G24820 [Eukaryotic aspartyl protease family protein] 1.042 0.087
15 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 1.037 -0.265
16 260101_at AT1G73260 ATKTI1, ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, KTI1, kunitz trypsin inhibitor 1 1.007 0.384
17 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 0.990 0.155
18 266330_at AT2G01530 MLP329, MLP-like protein 329, ZCE2, (Zusammen-CA)-enhanced 2 0.983 0.093
19 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 0.946 0.640
20 245244_at AT1G44350 ILL6, IAA-leucine resistant (ILR)-like gene 6 0.939 0.056
21 264887_at AT1G23120 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.932 0.208
22 247266_at AT5G64570 ATBXL4, ARABIDOPSIS THALIANA BETA-D-XYLOSIDASE 4, XYL4, beta-D-xylosidase 4 0.927 0.105
23 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.888 0.228
24 252698_at AT3G43670 [Copper amine oxidase family protein] 0.839 0.129
25 252137_at AT3G50980 XERO1, dehydrin xero 1 0.838 0.601
26 256725_at AT2G34070 TBL37, TRICHOME BIREFRINGENCE-LIKE 37 0.837 -0.125
27 246984_at AT5G67310 CYP81G1, cytochrome P450, family 81, subfamily G, polypeptide 1 0.802 0.132
28 263482_at AT2G03980 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.786 -0.382
29 264415_at AT1G43160 RAP2.6, related to AP2 6 0.767 0.500
30 266269_at AT2G29480 ATGSTU2, glutathione S-transferase tau 2, GST20, GLUTATHIONE S-TRANSFERASE 20, GSTU2, glutathione S-transferase tau 2 0.751 -0.044
31 261285_at AT1G35720 ANN1, annexin 1, ANNAT1, annexin 1, AtANN1, ATOXY5, OXY5 0.739 -0.027
32 256324_at AT1G66760 [MATE efflux family protein] 0.737 0.279
33 258362_at AT3G14280 unknown 0.733 0.006
34 251996_at AT3G52840 BGAL2, beta-galactosidase 2 0.699 0.485
35 253629_at AT4G30450 [glycine-rich protein] 0.680 -0.126
36 253373_at AT4G33150 LKR, LKR/SDH, LYSINE-KETOGLUTARATE REDUCTASE/SACCHAROPINE DEHYDROGENASE, SDH, SACCHAROPINE DEHYDROGENASE 0.675 0.347
37 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A 0.672 -0.200
38 251743_at AT3G55890 [Yippee family putative zinc-binding protein] 0.629 0.182
39 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 0.629 0.268
40 251235_at AT3G62860 [alpha/beta-Hydrolases superfamily protein] 0.626 0.208
41 261785_at AT1G08230 [Transmembrane amino acid transporter family protein] 0.568 0.135
42 247193_at AT5G65380 [MATE efflux family protein] 0.565 -0.006
43 262096_at AT1G56010 anac021, Arabidopsis NAC domain containing protein 21, ANAC022, Arabidopsis NAC domain containing protein 22, NAC1, NAC domain containing protein 1 0.560 0.076
44 255016_at AT4G10120 ATSPS4F 0.556 0.004
45 253534_at AT4G31500 ATR4, ALTERED TRYPTOPHAN REGULATION 4, CYP83B1, cytochrome P450, family 83, subfamily B, polypeptide 1, RED1, RED ELONGATED 1, RNT1, RUNT 1, SUR2, SUPERROOT 2 0.550 0.024
46 250483_at AT5G10300 AtHNL, ATMES5, ARABIDOPSIS THALIANA METHYL ESTERASE 5, HNL, HYDROXYNITRILE LYASE, MES5, methyl esterase 5 0.524 0.033
47 252915_at AT4G38810 [Calcium-binding EF-hand family protein] 0.515 0.009
48 251427_at AT3G60130 BGLU16, beta glucosidase 16 0.506 0.237
49 247356_at AT5G63800 BGAL6, beta-galactosidase 6, MUM2, MUCILAGE-MODIFIED 2 0.498 -0.288
50 262607_at AT1G13990 unknown 0.478 0.355
51 260943_at AT1G45145 ATH5, THIOREDOXIN H-TYPE 5, ATTRX5, thioredoxin H-type 5, LIV1, LOCUS OF INSENSITIVITY TO VICTORIN 1, TRX-h5, THIOREDOXIN H-TYPE 5, TRX5, thioredoxin H-type 5 0.469 0.086
52 256061_at AT1G07040 unknown 0.468 0.411
53 258751_at AT3G05890 RCI2B, RARE-COLD-INDUCIBLE 2B 0.466 -0.247
54 252993_at AT4G38540 [FAD/NAD(P)-binding oxidoreductase family protein] 0.462 0.269
55 250937_at AT5G03230 unknown 0.441 0.035
56 254573_at AT4G19420 [Pectinacetylesterase family protein] 0.436 -0.008
57 265345_at AT2G22680 WAVH1, WAV3 homolog 1 0.435 0.192
58 260887_at AT1G29160 [Dof-type zinc finger DNA-binding family protein] 0.430 0.145
59 260986_at AT1G53580 ETHE1, ETHE1-LIKE, GLX2-3, GLYOXALASE 2-3, GLY3, glyoxalase II 3 0.426 0.120
60 255463_at AT4G02960 ATRE2, retro element 2, RE2, retro element 2 0.419 0.014
61 246620_at AT5G36220 CYP81D1, cytochrome P450, family 81, subfamily D, polypeptide 1, CYP91A1, CYTOCHROME P450 91A1 0.418 0.270
62 258727_at AT3G11930 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.418 0.394
63 259154_at AT3G10260 [Reticulon family protein] 0.402 0.035
64 252097_at AT3G51090 unknown 0.398 -0.039
65 247601_at AT5G60850 OBP4, OBF binding protein 4 0.398 0.203
66 248263_at AT5G53370 ATPMEPCRF, PECTIN METHYLESTERASE PCR FRAGMENT F, PMEPCRF, pectin methylesterase PCR fragment F 0.386 -0.221
67 246510_at AT5G15410 ATCNGC2, CYCLIC NUCLEOTIDE-GATED CHANNEL 2, CNGC2, CYCLIC NUCLEOTIDE GATED CHANNEL 2, DND1, DEFENSE NO DEATH 1 0.384 0.109
68 266479_at AT2G31160 LSH3, LIGHT SENSITIVE HYPOCOTYLS 3, OBO1, ORGAN BOUNDARY 1 0.380 -0.126
69 251227_at AT3G62700 ABCC14, ATP-binding cassette C14, ATMRP10, multidrug resistance-associated protein 10, MRP10, multidrug resistance-associated protein 10 0.370 0.133
70 258195_at AT3G13890 ATMYB26, myb domain protein 26, MS35, MALE STERILE 35, MYB26, myb domain protein 26 0.369 0.032
71 267035_at AT2G38400 AGT3, alanine:glyoxylate aminotransferase 3 0.369 0.455
72 249068_at AT5G43980 PDLP1, plasmodesmata-located protein 1, PDLP1A, PLASMODESMATA-LOCATED PROTEIN 1A 0.355 -0.080
73 265277_at AT2G28410 unknown 0.338 -0.461
74 263015_at AT1G23440 [Peptidase C15, pyroglutamyl peptidase I-like] 0.336 0.020
75 267300_at AT2G30140 UGT87A2, UDP-glucosyl transferase 87A2 0.335 0.363
76 264611_at AT1G04680 [Pectin lyase-like superfamily protein] -0.994 -0.363
77 252691_at AT3G44050 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.963 -0.223
78 248963_at AT5G45700 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.937 -0.624
79 262081_at AT1G59540 ZCF125 -0.892 -0.238
80 261460_at AT1G07880 ATMPK13 -0.875 -0.333
81 261198_at AT1G12940 ATNRT2.5, nitrate transporter2.5, NRT2.5, nitrate transporter2.5 -0.872 0.218
82 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 -0.868 -0.595
83 258464_at AT3G17360 POK1, phragmoplast orienting kinesin 1 -0.832 -0.116
84 252763_at AT3G42725 [Putative membrane lipoprotein] -0.827 -0.604
85 255265_at AT4G05190 ATK5, kinesin 5 -0.821 -0.225
86 248413_at AT5G51600 ATMAP65-3, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, MAP65-3, MICROTUBULE-ASSOCIATED PROTEIN 65-3, PLE, PLEIADE -0.788 -0.362
87 262494_at AT1G21810 unknown -0.786 -0.186
88 259851_at AT1G72250 [Di-glucose binding protein with Kinesin motor domain] -0.768 -0.342
89 257115_at AT3G20150 [Kinesin motor family protein] -0.766 -0.338
90 259151_at AT3G10310 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] -0.765 -0.315
91 259930_at AT1G34355 ATPS1, PARALLEL SPINDLE 1, PS1, PARALLEL SPINDLE 1 -0.748 -0.251
92 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 -0.748 -0.191
93 248055_at AT5G55830 LecRK-S.7, L-type lectin receptor kinase S.7 -0.745 -0.256
94 249644_at AT5G37010 unknown -0.733 -0.204
95 253978_at AT4G26660 unknown -0.732 -0.380
96 247962_at AT5G56580 ANQ1, ARABIDOPSIS NQK1, ATMKK6, ARABIDOPSIS THALIANA MAP KINASE KINASE 6, MKK6, MAP kinase kinase 6 -0.703 -0.327
97 267636_at AT2G42110 unknown -0.688 -0.487
98 254379_at AT4G21820 [binding] -0.683 -0.404
99 248476_at AT5G50890 [alpha/beta-Hydrolases superfamily protein] -0.683 -0.211
100 256864_at AT3G23890 ATTOPII, TOPII, topoisomerase II -0.678 -0.138
101 261840_at AT1G16070 AtTLP8, tubby like protein 8, TLP8, tubby like protein 8 -0.672 -0.576
102 265085_at AT1G03780 AtTPX2, TPX2, targeting protein for XKLP2 -0.663 -0.099
103 257978_at AT3G20860 ATNEK5, NIMA-related kinase 5, NEK5, NIMA-related kinase 5 -0.655 -0.262
104 253148_at AT4G35620 CYCB2;2, Cyclin B2;2 -0.647 -0.235
105 265349_at AT2G22610 [Di-glucose binding protein with Kinesin motor domain] -0.645 -0.347
106 248691_at AT5G48310 unknown -0.624 -0.247
107 253757_at AT4G28950 ARAC7, Arabidopsis RAC-like 7, ATRAC7, ATROP9, RAC7, ROP9, RHO-related protein from plants 9 -0.613 -0.340
108 251832_at AT3G55150 ATEXO70H1, exocyst subunit exo70 family protein H1, EXO70H1, exocyst subunit exo70 family protein H1 -0.605 -0.037
109 248938_at AT5G45780 [Leucine-rich repeat protein kinase family protein] -0.605 0.049
110 248658_at AT5G48600 ATCAP-C, ARABIDOPSIS THALIANA CHROMOSOME ASSOCIATED PROTEIN-C, ATSMC3, structural maintenance of chromosome 3, ATSMC4, ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 4, SMC3, structural maintenance of chromosome 3 -0.593 -0.200
111 251388_at AT3G60840 MAP65-4, microtubule-associated protein 65-4 -0.591 -0.206
112 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 -0.586 -0.404
113 262036_at AT1G35530 At-FANCM, FANCM, Fanconi anemia complementation group M -0.585 -0.203
114 245739_at AT1G44110 CYCA1;1, Cyclin A1;1 -0.578 -0.331
115 258376_at AT3G17680 [Kinase interacting (KIP1-like) family protein] -0.576 -0.287
116 248074_at AT5G55730 FLA1, FASCICLIN-like arabinogalactan 1 -0.576 -0.319
117 262752_at AT1G16330 CYCB3;1, cyclin b3;1 -0.574 -0.283
118 252089_at AT3G52110 unknown -0.571 -0.460
119 264377_at AT2G25060 AtENODL14, ENODL14, early nodulin-like protein 14 -0.571 -0.453
120 246920_at AT5G25090 AtENODL13, ENODL13, early nodulin-like protein 13 -0.545 -0.707
121 246802_at AT5G27000 ATK4, kinesin 4, KATD, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D -0.545 0.106
122 254118_at AT4G24790 [AAA-type ATPase family protein] -0.543 -0.151
123 252149_at AT3G51290 APSR1, Altered Phosphate Starvation Response 1 -0.541 -0.138
124 250601_at AT5G07810 [SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein] -0.536 -0.196
125 250504_at AT5G09840 [Putative endonuclease or glycosyl hydrolase] -0.532 -0.164
126 258471_at AT3G06030 ANP3, NPK1-related protein kinase 3, AtANP3, MAPKKK12, NP3, NPK1-related protein kinase 3 -0.526 -0.320
127 261364_at AT1G53140 DRP5A, Dynamin related protein 5A -0.522 -0.136
128 247134_at AT5G66230 [Chalcone-flavanone isomerase family protein] -0.519 -0.203
129 257524_at AT3G01330 DEL3, DP-E2F-like protein 3, E2FF, E2L2, E2F-LIKE 2 -0.517 0.023
130 251527_at AT3G58650 TRM7, TON1 Recruiting Motif 7 -0.515 -0.118
131 254808_at AT4G12740 [HhH-GPD base excision DNA repair family protein] -0.514 -0.100
132 266508_at AT2G47920 NET3C, Networked 3C -0.511 -0.130
133 264895_at AT1G23100 [GroES-like family protein] -0.497 -0.531
134 258702_at AT3G09730 unknown -0.495 -0.105
135 262336_at AT1G64220 TOM7-2, translocase of outer membrane 7 kDa subunit 2 -0.482 -0.565
136 259448_at AT1G13790 FDM4, factor of DNA methylation 4 -0.477 -0.006
137 246315_at AT3G56870 unknown -0.474 -0.187
138 250196_at AT5G14580 [polyribonucleotide nucleotidyltransferase, putative] -0.474 -0.368
139 252877_at AT4G39630 unknown -0.468 -0.428
140 263441_at AT2G28620 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.461 -0.461
141 249837_at AT5G23480 [SWIB/MDM2 domain] -0.452 -0.006
142 259978_at AT1G76540 CDKB2;1, cyclin-dependent kinase B2;1 -0.447 0.002
143 261085_at AT1G17480 IQD7, IQ-domain 7 -0.443 -0.205
144 251035_at AT5G02220 SMR4, SIAMESE-RELATED 4 -0.441 -0.344
145 249032_at AT5G44910 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.437 0.206
146 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 -0.435 0.043
147 257005_at AT3G14190 CMR1, COPPER MODIFIED RESISTANCE 1 -0.433 -0.257
148 261384_at AT1G05440 [C-8 sterol isomerases] -0.432 -0.234
149 254443_at AT4G21070 ATBRCA1, ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1, BRCA1, breast cancer susceptibility1 -0.415 -0.158