4.0:Information of module
HARAP aerobic
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009165 nucleotide biosynthetic process BP 1.439e-09
GO:1901293 nucleoside phosphate biosynthetic proces... BP 1.629e-09
GO:0044711 single-organism biosynthetic process BP 8.956e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 3.722e-46
GO:0010200 response to chitin BP 7.409e-46
GO:0010243 response to organonitrogen compound BP 1.148e-44
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
HARAP aerobic		 Log2 signal ratio
Leafminer damaged seedlings
1 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 1.543 0.024
2 247024_at AT5G66985 unknown 0.824 -0.016
3 249384_at AT5G39890 unknown 0.823 0.020
4 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] 0.735 -0.025
5 255807_at AT4G10270 [Wound-responsive family protein] 0.722 0.039
6 250152_at AT5G15120 unknown 0.685 -0.041
7 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.463 0.076
8 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.425 0.456
9 252882_at AT4G39675 unknown 0.425 0.080
10 261567_at AT1G33055 unknown 0.418 0.015
11 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.396 -0.015
12 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 0.394 0.097
13 253298_at AT4G33560 [Wound-responsive family protein] 0.370 -0.020
14 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.366 0.008
15 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.363 0.198
16 245317_at AT4G15610 [Uncharacterised protein family (UPF0497)] 0.311 0.693
17 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 0.309 -0.105
18 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.274 0.048
19 266901_at AT2G34600 JAZ7, jasmonate-zim-domain protein 7, TIFY5B 0.247 1.244
20 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] 0.235 -0.432
21 260408_at AT1G69880 ATH8, thioredoxin H-type 8, TH8, thioredoxin H-type 8 0.232 0.373
22 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.231 0.139
23 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.226 0.147
24 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.220 -0.287
25 245951_at AT5G19550 AAT2, ASPARTATE AMINOTRANSFERASE 2, ASP2, aspartate aminotransferase 2 0.212 0.111
26 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 0.211 0.490
27 255877_at AT2G40460 [Major facilitator superfamily protein] 0.209 -0.062
28 253165_at AT4G35320 unknown 0.199 -0.252
29 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 0.195 0.788
30 262198_at AT1G53830 ATPME2, pectin methylesterase 2, PME2, pectin methylesterase 2 0.193 0.241
31 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.192 0.224
32 246385_at AT1G77390 CYCA1, CYCLIN A1, CYCA1;2, CYCLIN A1;2, DYP, TAM, TARDY ASYNCHRONOUS MEIOSIS 0.183 0.046
33 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 0.181 -0.053
34 254667_at AT4G18280 [glycine-rich cell wall protein-related] 0.175 0.239
35 247189_at AT5G65390 AGP7, arabinogalactan protein 7 0.173 -0.352
36 253050_at AT4G37450 AGP18, arabinogalactan protein 18, ATAGP18 0.170 -0.278
37 267260_at AT2G23130 AGP17, arabinogalactan protein 17, ATAGP17 0.156 -0.619
38 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.155 -0.797
39 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] 0.155 -0.425
40 260686_at AT1G17620 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.155 0.187
41 259507_at AT1G43910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.154 -0.334
42 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] 0.154 0.012
43 252563_at AT3G45970 ATEXLA1, expansin-like A1, ATEXPL1, ATHEXP BETA 2.1, EXLA1, expansin-like A1, EXPL1, EXPANSIN L1 0.153 0.345
44 256577_at AT3G28220 [TRAF-like family protein] 0.153 0.671
45 254611_at AT4G19095 unknown 0.151 -0.046
46 250201_at AT5G14230 unknown 0.150 -0.198
47 252167_at AT3G50560 [NAD(P)-binding Rossmann-fold superfamily protein] 0.148 -0.566
48 265025_at AT1G24575 unknown 0.144 0.240
49 262197_at AT1G53910 RAP2.12, related to AP2 12 0.142 0.119
50 255806_at AT4G10260 [pfkB-like carbohydrate kinase family protein] 0.139 -0.031
51 245479_at AT4G16140 [proline-rich family protein] 0.137 -0.205
52 267470_at AT2G30490 ATC4H, CINNAMATE 4-HYDROXYLASE, C4H, cinnamate-4-hydroxylase, CYP73A5, REF3, REDUCED EPRDERMAL FLUORESCENCE 3 0.134 0.115
53 253629_at AT4G30450 [glycine-rich protein] 0.132 0.208
54 251394_at AT3G60900 FLA10, FASCICLIN-like arabinogalactan-protein 10 0.131 -0.030
55 264685_at AT1G65610 ATGH9A2, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A2, KOR2, KORRIGAN 2 0.129 0.289
56 252160_at AT3G50570 [hydroxyproline-rich glycoprotein family protein] 0.129 -0.258
57 265171_at AT1G23790 unknown 0.127 -0.049
58 266418_at AT2G38750 ANNAT4, annexin 4, AtANN4 0.126 0.422
59 250024_at AT5G18270 ANAC087, Arabidopsis NAC domain containing protein 87 0.126 0.015
60 267144_at AT2G38110 ATGPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6, GPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6 0.125 -0.048
61 261609_at AT1G49740 [PLC-like phosphodiesterases superfamily protein] 0.122 -0.120
62 247069_at AT5G66920 sks17, SKU5 similar 17 0.122 -0.463
63 256409_at AT1G66620 [Protein with RING/U-box and TRAF-like domains] 0.121 -0.015
64 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.120 0.009
65 253931_at AT4G26770 [Phosphatidate cytidylyltransferase family protein] 0.119 0.051
66 258009_at AT3G19440 [Pseudouridine synthase family protein] 0.117 0.008
67 258172_at AT3G21620 [ERD (early-responsive to dehydration stress) family protein] 0.116 0.030
68 257813_at AT3G25100 CDC45, cell division cycle 45 0.115 -0.080
69 263971_at AT2G42800 AtRLP29, receptor like protein 29, RLP29, receptor like protein 29 0.114 -0.015
70 266989_at AT2G39330 JAL23, jacalin-related lectin 23 0.114 0.699
71 247301_at AT5G63920 AtTOP3alpha, TOP3A, topoisomerase 3alpha 0.111 -0.073
72 264114_at AT2G31270 ATCDT1A, ARABIDOPSIS HOMOLOG OF YEAST CDT1 A, CDT1, ARABIDOPSIS HOMOLOG OF YEAST CDT1, CDT1A, homolog of yeast CDT1 A 0.110 -0.100
73 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 0.110 0.437
74 255250_at AT4G05100 AtMYB74, myb domain protein 74, MYB74, myb domain protein 74 0.110 1.214
75 261876_at AT1G50590 [RmlC-like cupins superfamily protein] 0.109 0.352
76 246555_at AT5G15470 GAUT14, galacturonosyltransferase 14 0.108 0.003
77 264395_at AT1G12070 [Immunoglobulin E-set superfamily protein] 0.107 -0.004
78 253605_at AT4G30990 [ARM repeat superfamily protein] 0.107 -0.106
79 257697_at AT3G12700 NANA, NANA 0.105 0.262
80 254085_at AT4G24960 ATHVA22D, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE D, HVA22D, HVA22 homologue D 0.104 0.255
81 266891_at AT2G44690 ARAC9, Arabidopsis RAC-like 9, ATROP8, RHO-RELATED PROTEIN FROM PLANTS 8, ROP8, RHO-RELATED PROTEIN FROM PLANTS 8 0.104 -0.066
82 251223_at AT3G62610 ATMYB11, myb domain protein 11, MYB11, myb domain protein 11, PFG2, PRODUCTION OF FLAVONOL GLYCOSIDES 2 0.103 -0.084
83 249821_at AT5G23690 [Polynucleotide adenylyltransferase family protein] 0.103 -0.061
84 245002_at ATCG00270 PSBD, photosystem II reaction center protein D 0.103 -0.081
85 259383_at AT3G16470 JAL35, jacalin-related lectin 35, JR1, JASMONATE RESPONSIVE 1 0.102 0.377
86 265938_at AT2G19620 NDL3, N-MYC downregulated-like 3 0.101 -0.197
87 248704_at AT5G48450 sks3, SKU5 similar 3 0.101 0.109
88 251730_at AT3G56330 [N2,N2-dimethylguanosine tRNA methyltransferase] 0.101 -0.014
89 249809_at AT5G23910 [ATP binding microtubule motor family protein] 0.101 -0.091
90 257618_at AT3G24715 [Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain] 0.100 -0.255
91 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 -0.571 0.468
92 245755_at AT1G35210 unknown -0.488 0.313
93 256442_at AT3G10930 unknown -0.442 0.757
94 253643_at AT4G29780 unknown -0.439 0.791
95 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 -0.425 0.507
96 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.408 0.475
97 258947_at AT3G01830 [Calcium-binding EF-hand family protein] -0.406 1.304
98 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.400 0.270
99 260804_at AT1G78410 [VQ motif-containing protein] -0.394 0.596
100 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 -0.376 1.075
101 264866_at AT1G24140 [Matrixin family protein] -0.370 0.543
102 253044_at AT4G37290 unknown -0.344 0.512
103 266800_at AT2G22880 [VQ motif-containing protein] -0.320 1.092
104 246923_at AT5G25100 [Endomembrane protein 70 protein family] -0.317 -0.107
105 261470_at AT1G28370 ATERF11, ERF DOMAIN PROTEIN 11, ERF11, ERF domain protein 11 -0.317 0.767
106 254074_at AT4G25490 ATCBF1, CBF1, C-repeat/DRE binding factor 1, DREB1B, DRE BINDING PROTEIN 1B -0.312 0.333
107 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 -0.305 0.254
108 254075_at AT4G25470 ATCBF2, CBF2, C-repeat/DRE binding factor 2, DREB1C, DRE/CRT-BINDING PROTEIN 1C, FTQ4, FREEZING TOLERANCE QTL 4 -0.290 0.615
109 261474_at AT1G14540 PER4, peroxidase 4 -0.287 0.476
110 249417_at AT5G39670 [Calcium-binding EF-hand family protein] -0.285 0.344
111 258792_at AT3G04640 [glycine-rich protein] -0.284 0.826
112 253322_at AT4G33980 unknown -0.276 0.060
113 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 -0.276 0.216
114 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.274 0.693
115 259211_at AT3G09020 [alpha 1,4-glycosyltransferase family protein] -0.268 0.527
116 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] -0.267 0.501
117 245840_at AT1G58420 [Uncharacterised conserved protein UCP031279] -0.265 0.686
118 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] -0.261 0.592
119 248164_at AT5G54490 PBP1, pinoid-binding protein 1 -0.255 0.597
120 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 -0.254 0.701
121 263182_at AT1G05575 unknown -0.252 1.162
122 258787_at AT3G11840 PUB24, plant U-box 24 -0.252 0.519
123 254066_at AT4G25480 ATCBF3, CBF3, C-REPEAT BINDING FACTOR 3, DREB1A, dehydration response element B1A -0.248 0.837
124 255319_at AT4G04220 AtRLP46, receptor like protein 46, RLP46, receptor like protein 46 -0.246 0.330
125 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 -0.244 0.401
126 250098_at AT5G17350 unknown -0.242 0.193
127 267623_at AT2G39650 unknown -0.241 0.339
128 251054_at AT5G01540 LecRK-VI.2, L-type lectin receptor kinase-VI.2, LECRKA4.1, lectin receptor kinase a4.1 -0.231 0.487
129 254660_at AT4G18250 [receptor serine/threonine kinase, putative] -0.230 0.503
130 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 -0.229 1.010
131 250796_at AT5G05300 unknown -0.228 0.524
132 260957_at AT1G06080 ADS1, delta 9 desaturase 1, AtADS1 -0.226 -0.035
133 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] -0.226 0.939
134 260399_at AT1G72520 ATLOX4, Arabidopsis thaliana lipoxygenase 4, LOX4, lipoxygenase 4 -0.225 0.876
135 245711_at AT5G04340 C2H2, CZF2, COLD INDUCED ZINC FINGER PROTEIN 2, ZAT6, zinc finger of Arabidopsis thaliana 6 -0.224 0.847
136 249850_at AT5G23240 DJC76, DNA J protein C76 -0.223 0.394
137 248934_at AT5G46080 [Protein kinase superfamily protein] -0.222 0.625
138 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 -0.222 0.606
139 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis -0.222 0.655
140 265184_at AT1G23710 unknown -0.220 0.294
141 254243_at AT4G23210 CRK13, cysteine-rich RLK (RECEPTOR-like protein kinase) 13 -0.220 0.758
142 264000_at AT2G22500 ATPUMP5, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, DIC1, DICARBOXYLATE CARRIER 1, UCP5, uncoupling protein 5 -0.218 0.532
143 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b -0.217 0.669
144 247252_at AT5G64770 CLEL 9, CLE-like 9, GLV2, GOLVEN 2, RGF9, root meristem growth factor 9 -0.213 -0.142
145 245193_at AT1G67810 SUFE2, sulfur E2 -0.210 0.595
146 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a -0.210 0.486
147 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 -0.206 0.833
148 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 -0.206 0.581
149 256633_at AT3G28340 GATL10, galacturonosyltransferase-like 10, GolS8, galactinol synthase 8 -0.206 0.375
150 247071_at AT5G66640 DAR3, DA1-related protein 3 -0.206 0.500
151 254524_at AT4G20000 [VQ motif-containing protein] -0.204 0.228
152 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] -0.203 0.225
153 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 -0.202 0.597
154 263379_at AT2G40140 ATSZF2, CZF1, SZF2, (SALT-INDUCIBLE ZINC FINGER 2, ZFAR1 -0.200 0.411
155 262452_at AT1G11210 unknown -0.199 0.762
156 255753_at AT1G18570 AtMYB51, myb domain protein 51, BW51A, BW51B, HIG1, HIGH INDOLIC GLUCOSINOLATE 1, MYB51, myb domain protein 51 -0.198 0.361
157 257536_at AT3G02800 AtPFA-DSP3, PFA-DSP3, plant and fungi atypical dual-specificity phosphatase 3 -0.197 0.248
158 248327_at AT5G52750 [Heavy metal transport/detoxification superfamily protein ] -0.192 0.533
159 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 -0.189 0.365
160 258653_at AT3G09870 SAUR48, SMALL AUXIN UPREGULATED RNA 48 -0.189 0.046
161 249918_at AT5G19240 [Glycoprotein membrane precursor GPI-anchored] -0.185 0.162
162 254592_at AT4G18880 AT-HSFA4A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A4A, HSF A4A, heat shock transcription factor A4A -0.185 0.396
163 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G -0.183 0.509
164 249719_at AT5G35735 [Auxin-responsive family protein] -0.182 0.634
165 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A -0.180 0.635
166 263847_at AT2G36970 [UDP-Glycosyltransferase superfamily protein] -0.179 -0.253
167 249896_at AT5G22530 unknown -0.178 0.375
168 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 -0.178 -0.140
169 253859_at AT4G27657 unknown -0.177 0.474
170 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 -0.177 0.310
171 256185_at AT1G51700 ADOF1, DOF zinc finger protein 1, DOF1, DOF zinc finger protein 1 -0.176 0.059
172 262935_at AT1G79410 AtOCT5, organic cation/carnitine transporter5, OCT5, organic cation/carnitine transporter5 -0.174 0.205
173 258436_at AT3G16720 ATL2, TOXICOS EN LEVADURA 2, TL2, TOXICOS EN LEVADURA 2 -0.174 0.121
174 257280_at AT3G14440 ATNCED3, NCED3, nine-cis-epoxycarotenoid dioxygenase 3, SIS7, SUGAR INSENSITIVE 7, STO1, SALT TOLERANT 1 -0.172 1.073
175 259479_at AT1G19020 unknown -0.172 0.643
176 246584_at AT5G14730 unknown -0.170 0.298
177 252474_at AT3G46620 unknown -0.170 0.256
178 254759_at AT4G13180 [NAD(P)-binding Rossmann-fold superfamily protein] -0.170 0.264
179 253679_at AT4G29610 [Cytidine/deoxycytidylate deaminase family protein] -0.169 0.279