4.0:Information of module
Hypoxic prt6
In comparison with upb1-1 meristematic zone help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009267 cellular response to starvation BP 7.713e-09
GO:0031668 cellular response to extracellular stimu... BP 1.619e-08
GO:0071496 cellular response to external stimulus BP 1.619e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009414 response to water deprivation BP 1.278e-07
GO:0009415 response to water BP 2.219e-07
GO:0042538 hyperosmotic salinity response BP 2.902e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Hypoxic prt6		 Log2 signal ratio
upb1-1 meristematic zone
1 256940_at AT3G30720 QQS, QUA-QUINE STARCH 1.020 -0.461
2 245226_at AT3G29970 [B12D protein] 0.992 -0.070
3 257947_at AT3G21720 ICL, isocitrate lyase 0.661 -0.198
4 262719_at AT1G43590 unknown 0.555 -0.044
5 252882_at AT4G39675 unknown 0.477 0.036
6 250868_at AT5G03860 MLS, malate synthase 0.407 0.005
7 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.384 0.085
8 246001_at AT5G20790 unknown 0.372 -0.055
9 264729_at AT1G22990 HIPP22, heavy metal associated isoprenylated plant protein 22 0.348 -0.036
10 254644_at AT4G18510 CLE2, CLAVATA3/ESR-related 2 0.338 -0.016
11 246273_at AT4G36700 [RmlC-like cupins superfamily protein] 0.334 -0.068
12 245076_at AT2G23170 GH3.3 0.332 -0.115
13 258293_at AT3G23430 ATPHO1, ARABIDOPSIS PHOSPHATE 1, PHO1, phosphate 1 0.328 -0.131
14 263207_at AT1G10550 XET, XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33, XTH33, xyloglucan:xyloglucosyl transferase 33 0.312 0.079
15 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 0.295 0.064
16 264469_at AT1G67100 LBD40, LOB domain-containing protein 40 0.286 0.067
17 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 0.277 -0.093
18 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.271 -0.009
19 258257_at AT3G26770 [NAD(P)-binding Rossmann-fold superfamily protein] 0.270 -0.045
20 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.270 0.030
21 260668_at AT1G19530 unknown 0.263 0.082
22 256774_at AT3G13760 [Cysteine/Histidine-rich C1 domain family protein] 0.261 0.038
23 254832_at AT4G12490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.251 0.017
24 258856_at AT3G02040 AtGDPD1, GDPD1, Glycerophosphodiester phosphodiesterase 1, SRG3, senescence-related gene 3 0.245 -0.020
25 260941_at AT1G44970 [Peroxidase superfamily protein] 0.240 -0.097
26 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.226 -0.001
27 259624_at AT1G43020 unknown 0.223 0.054
28 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 0.222 0.028
29 261717_at AT1G18400 BEE1, BR enhanced expression 1 0.222 0.020
30 267580_at AT2G41990 unknown 0.221 0.014
31 249320_at AT5G40910 [Disease resistance protein (TIR-NBS-LRR class) family] 0.211 0.044
32 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 0.208 -0.091
33 260462_at AT1G10970 ATZIP4, ZIP4, zinc transporter 4 precursor 0.205 -0.047
34 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.200 0.036
35 249346_at AT5G40780 LHT1, lysine histidine transporter 1 0.195 0.011
36 258207_at AT3G14050 AT-RSH2, RELA-SPOT HOMOLOG 2, ATRSH2, RELA/SPOT HOMOLOG 2, RSH2, RELA/SPOT homolog 2 0.195 -0.020
37 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 0.191 -0.123
38 250438_at AT5G10580 unknown 0.188 -0.036
39 266743_at AT2G02990 ATRNS1, RIBONUCLEASE 1, RNS1, ribonuclease 1 0.188 -0.050
40 266336_at AT2G32270 ZIP3, zinc transporter 3 precursor 0.186 -0.080
41 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.184 -0.021
42 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 0.182 -0.146
43 245228_at AT3G29810 COBL2, COBRA-like protein 2 precursor 0.180 -0.057
44 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 0.176 0.039
45 260170_at AT1G71890 ATSUC5, SUCROSE-PROTON SYMPORTER 5, SUC5 0.174 -0.062
46 246000_at AT5G20820 SAUR76, SMALL AUXIN UPREGULATED RNA 76 0.172 -0.102
47 254931_at AT4G11460 CRK30, cysteine-rich RLK (RECEPTOR-like protein kinase) 30 0.167 -0.027
48 245353_at AT4G16000 unknown 0.167 -0.032
49 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 0.163 -0.031
50 265658_at AT2G13810 ALD1, AGD2-like defense response protein 1, AtALD1, EDTS5, eds two suppressor 5 0.161 0.025
51 262001_at AT1G33790 [jacalin lectin family protein] 0.161 -0.154
52 259977_at AT1G76590 [PLATZ transcription factor family protein] 0.159 -0.081
53 246389_at AT1G77380 AAP3, amino acid permease 3, ATAAP3 0.158 -0.024
54 247682_at AT5G59650 [Leucine-rich repeat protein kinase family protein] 0.157 0.019
55 254022_at AT4G25750 ABCG4, ATP-binding cassette G4 0.157 -0.028
56 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.157 0.010
57 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.157 -0.048
58 261135_at AT1G19610 LCR78, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 0.156 -0.050
59 257945_at AT3G21860 ASK10, SKP1-like 10, SK10, SKP1-like 10 0.156 -0.093
60 253296_at AT4G33770 ITPK2, inositol 1,3,4-trisphosphate 5/6 kinase 2 0.154 0.013
61 252751_at AT3G43430 [RING/U-box superfamily protein] 0.151 0.009
62 256132_at AT1G13610 [alpha/beta-Hydrolases superfamily protein] 0.147 0.007
63 246366_at AT1G51850 [Leucine-rich repeat protein kinase family protein] 0.144 -0.003
64 263401_at AT2G04070 [MATE efflux family protein] 0.144 0.008
65 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 0.144 0.031
66 266670_at AT2G29740 UGT71C2, UDP-glucosyl transferase 71C2 0.143 -0.007
67 267035_at AT2G38400 AGT3, alanine:glyoxylate aminotransferase 3 0.141 -0.029
68 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 -0.871 -0.069
69 266544_at AT2G35300 AtLEA4-2, late embryogenesis abundant 4-2, LEA18, late embryogenesis abundant 18, LEA4-2, late embryogenesis abundant 4-2 -0.855 -0.046
70 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 -0.819 0.018
71 249353_at AT5G40420 OLE2, OLEOSIN 2, OLEO2, oleosin 2 -0.715 0.029
72 258347_at AT3G17520 [Late embryogenesis abundant protein (LEA) family protein] -0.684 0.026
73 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 -0.656 -0.015
74 266654_at AT2G25890 [Oleosin family protein] -0.555 -0.062
75 256814_at AT3G21370 BGLU19, beta glucosidase 19 -0.549 0.101
76 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 -0.542 0.034
77 250824_at AT5G05200 [Protein kinase superfamily protein] -0.519 -0.014
78 256577_at AT3G28220 [TRAF-like family protein] -0.516 -0.045
79 256464_at AT1G32560 AtLEA4-1, Late Embryogenesis Abundant 4-1, LEA4-1, Late Embryogenesis Abundant 4-1 -0.504 -0.056
80 247437_at AT5G62490 ATHVA22B, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE B, HVA22B, HVA22 homologue B -0.490 -0.055
81 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.461 0.006
82 258224_at AT3G15670 [Late embryogenesis abundant protein (LEA) family protein] -0.445 0.002
83 257130_at AT3G20210 DELTA-VPE, delta vacuolar processing enzyme, DELTAVPE, DELTA VACUOLAR PROCESSING ENZYME -0.416 0.016
84 259185_at AT3G01550 ATPPT2, PHOSPHOENOLPYRUVATE (PEP)/PHOSPHATE TRANSLOCATOR 2, PPT2, phosphoenolpyruvate (pep)/phosphate translocator 2 -0.399 -0.112
85 251838_at AT3G54940 [Papain family cysteine protease] -0.390 0.031
86 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] -0.368 -0.055
87 263497_at AT2G42540 COR15, COR15A, cold-regulated 15a -0.361 -0.003
88 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.355 0.164
89 250942_at AT5G03350 [Legume lectin family protein] -0.351 0.006
90 248353_at AT5G52320 CYP96A4, cytochrome P450, family 96, subfamily A, polypeptide 4 -0.345 -0.061
91 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 -0.345 -0.108
92 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 -0.325 0.032
93 253743_at AT4G28940 [Phosphorylase superfamily protein] -0.303 -0.053
94 266143_at AT2G38905 [Low temperature and salt responsive protein family] -0.295 0.021
95 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] -0.293 -0.020
96 262301_at AT1G70880 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.287 -0.069
97 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 -0.277 0.096
98 259866_at AT1G76640 CML39, CALMODULIN LIKE 39 -0.270 0.113
99 257512_at AT1G35250 ALT2, acyl-lipid thioesterase 2 -0.262 0.009
100 247866_at AT5G57550 XTH25, xyloglucan endotransglucosylase/hydrolase 25, XTR3, xyloglucan endotransglycosylase 3 -0.262 0.033
101 257365_x_at AT2G26020 PDF1.2b, plant defensin 1.2b -0.252 0.022
102 252594_at AT3G45680 [Major facilitator superfamily protein] -0.252 -0.010
103 254333_at AT4G22753 ATSMO1-3, SMO1-3, sterol 4-alpha methyl oxidase 1-3 -0.248 -0.030
104 254440_at AT4G21020 [Late embryogenesis abundant protein (LEA) family protein] -0.247 0.038
105 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] -0.243 -0.091
106 245816_at AT1G26210 ATSOFL1, SOB FIVE-LIKE 1, SOFL1, SOB five-like 1 -0.233 0.077
107 251706_at AT3G56620 UMAMIT10, Usually multiple acids move in and out Transporters 10 -0.232 -0.040
108 253946_at AT4G26790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.227 -0.053
109 255438_at AT4G03070 AOP, AOP1, AOP1.1 -0.227 -0.045
110 257017_at AT3G19620 [Glycosyl hydrolase family protein] -0.226 -0.075
111 249774_at AT5G24150 SQE5, SQUALENE MONOOXYGENASE 5, SQP1 -0.222 -0.098
112 259789_at AT1G29395 COR413-TM1, COLD REGULATED 314 THYLAKOID MEMBRANE 1, COR413IM1, COLD REGULATED 314 INNER MEMBRANE 1, COR414-TM1, cold regulated 414 thylakoid membrane 1 -0.221 0.046
113 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.214 -0.020
114 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.213 -0.111
115 245253_at AT4G15440 CYP74B2, HPL1, hydroperoxide lyase 1 -0.213 0.041
116 247213_at AT5G64900 ATPEP1, ARABIDOPSIS THALIANA PEPTIDE 1, PEP1, PEPTIDE 1, PROPEP1, precursor of peptide 1 -0.213 0.074
117 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 -0.211 -0.041
118 266170_at AT2G39050 ArathEULS3, EULS3, Euonymus lectin S3 -0.211 0.035
119 251229_at AT3G62740 BGLU7, beta glucosidase 7 -0.210 -0.045
120 250045_at AT5G17700 [MATE efflux family protein] -0.210 0.116
121 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 -0.203 -0.009
122 266708_at AT2G03200 [Eukaryotic aspartyl protease family protein] -0.200 0.080
123 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 -0.197 0.020
124 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 -0.196 0.033
125 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 -0.194 0.073
126 252341_at AT3G48940 [Remorin family protein] -0.191 0.264
127 260917_at AT1G02700 unknown -0.185 -0.018
128 259985_at AT1G76620 unknown -0.184 0.082
129 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 -0.179 0.038
130 245335_at AT4G16160 ATOEP16-2, ATOEP16-S -0.177 -0.005
131 258181_at AT3G21670 AtNPF6.4, NPF6.4, NRT1/ PTR family 6.4 -0.172 0.078
132 246002_at AT5G20740 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.171 0.011
133 255549_at AT4G01950 ATGPAT3, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 3, GPAT3, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 3 -0.171 0.022