4.0:Information of module
root longitudinal zone-2 low sulfur
In comparison with Whole root - low pH 6H help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016192 vesicle-mediated transport BP 1.859e-06
GO:0048193 Golgi vesicle transport BP 5.795e-06
GO:0051641 cellular localization BP 2.533e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 6.983e-08
GO:0009628 response to abiotic stimulus BP 6.225e-07
GO:1901700 response to oxygen-containing compound BP 3.198e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root longitudinal zone-2 low sulfur		 Log2 signal ratio
Whole root - low pH 6H
1 247476_at AT5G62330 unknown 0.970 -0.648
2 250068_at AT5G17960 [Cysteine/Histidine-rich C1 domain family protein] 0.764 -0.025
3 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] 0.730 -0.177
4 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] 0.607 -0.195
5 246814_at AT5G27200 ACP5, acyl carrier protein 5 0.481 -0.177
6 267080_at AT2G41190 [Transmembrane amino acid transporter family protein] 0.463 -0.248
7 254213_at AT4G23590 [Tyrosine transaminase family protein] 0.420 -0.134
8 263923_at AT2G36485 [ENTH/VHS family protein] 0.395 -0.073
9 256847_at AT3G27950 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.393 -0.371
10 252950_at AT4G38690 [PLC-like phosphodiesterases superfamily protein] 0.381 -0.091
11 261540_at AT1G63610 unknown 0.379 -0.128
12 248423_at AT5G51670 unknown 0.377 0.051
13 255617_at AT4G01330 [Protein kinase superfamily protein] 0.376 -0.106
14 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] 0.361 -0.254
15 258638_at AT3G07950 [rhomboid protein-related] 0.352 -0.062
16 253465_at AT4G32120 [Galactosyltransferase family protein] 0.335 -0.120
17 257613_at AT3G26610 [Pectin lyase-like superfamily protein] 0.332 -0.156
18 249728_at AT5G24390 [Ypt/Rab-GAP domain of gyp1p superfamily protein] 0.331 -0.153
19 246114_at AT5G20250 DIN10, DARK INDUCIBLE 10, RS6, raffinose synthase 6 0.331 -0.183
20 255318_at AT4G04190 unknown 0.329 -0.088
21 246132_at AT5G20850 ATRAD51, RAD51 0.320 -0.163
22 264939_at AT1G60630 [Leucine-rich repeat protein kinase family protein] 0.301 0.057
23 251255_at AT3G62280 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.290 -0.278
24 257670_at AT3G20340 unknown 0.283 -0.234
25 255267_at AT4G05210 AtLpxD1, LpxD1, lipid X D1 0.281 -0.078
26 248347_at AT5G52250 EFO1, EARLY FLOWERING BY OVEREXPRESSION 1, RUP1, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 0.278 -0.059
27 259851_at AT1G72250 [Di-glucose binding protein with Kinesin motor domain] 0.274 -0.157
28 262222_at AT1G74700 NUZ, TRZ1, tRNAse Z1 0.261 -0.044
29 248778_at AT5G47940 unknown 0.261 -0.052
30 250127_at AT5G16380 unknown 0.260 0.089
31 256746_at AT3G29320 PHS1, alpha-glucan phosphorylase 1 0.260 -0.044
32 245524_at AT4G15920 AtSWEET17, SWEET17 0.259 0.046
33 260011_at AT1G68110 [ENTH/ANTH/VHS superfamily protein] 0.256 0.065
34 261852_at AT1G50440 [RING/FYVE/PHD zinc finger superfamily protein] 0.255 -0.005
35 245031_at AT2G26360 [Mitochondrial substrate carrier family protein] 0.250 -0.183
36 250838_at AT5G04630 CYP77A9, cytochrome P450, family 77, subfamily A, polypeptide 9 0.249 0.022
37 259398_at AT1G17700 PRA1.F1, prenylated RAB acceptor 1.F1 0.249 -0.022
38 248874_at AT5G46460 [Pentatricopeptide repeat (PPR) superfamily protein] 0.246 0.031
39 257951_at AT3G21700 ATSGP2, SGP2 0.245 -0.006
40 251952_at AT3G53650 [Histone superfamily protein] 0.241 -0.342
41 251840_at AT3G54960 ATPDI1, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 1, ATPDIL1-3, PDI-like 1-3, PDI1, PROTEIN DISULFIDE ISOMERASE 1, PDIL1-3, PDI-like 1-3 0.240 -0.218
42 260951_at AT1G06150 EMB1444, EMBRYO DEFECTIVE 1444 0.239 -0.029
43 252241_at AT3G50050 [Eukaryotic aspartyl protease family protein] 0.237 -0.103
44 247352_at AT5G63650 SNRK2-5, SNRK2.5, SNF1-related protein kinase 2.5, SRK2H, SNF1-RELATED PROTEIN KINASE 2H 0.237 -0.180
45 254815_at AT4G12420 SKU5 0.235 -0.071
46 266334_at AT2G32380 [Transmembrane protein 97, predicted] 0.233 -0.167
47 249060_at AT5G44560 VPS2.2 0.233 -0.058
48 264779_at AT1G08570 ACHT4, atypical CYS HIS rich thioredoxin 4 0.233 0.056
49 265457_at AT2G46550 unknown 0.229 0.024
50 265650_at AT2G27460 [sec23/sec24 transport family protein] 0.228 -0.064
51 255842_at AT2G33530 scpl46, serine carboxypeptidase-like 46 0.226 -0.065
52 249334_at AT5G41000 AtYSL4, YSL4, YELLOW STRIPE like 4 0.223 -0.126
53 262647_at AT1G14020 [O-fucosyltransferase family protein] 0.223 -0.118
54 247440_at AT5G62680 AtNPF2.11, GTR2, GLUCOSINOLATE TRANSPORTER-2, NPF2.11, NRT1/ PTR family 2.11 0.220 -0.008
55 255055_at AT4G09810 [Nucleotide-sugar transporter family protein] 0.219 -0.072
56 261822_at AT1G11380 [PLAC8 family protein] 0.218 -0.064
57 247024_at AT5G66985 unknown -0.998 0.010
58 258114_at AT3G14660 CYP72A13, cytochrome P450, family 72, subfamily A, polypeptide 13 -0.955 0.086
59 247070_at AT5G66815 unknown -0.945 0.053
60 263828_at AT2G40250 [SGNH hydrolase-type esterase superfamily protein] -0.908 0.281
61 265422_at AT2G20800 NDB4, NAD(P)H dehydrogenase B4 -0.754 0.839
62 247212_at AT5G65040 unknown -0.742 0.096
63 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] -0.705 0.450
64 266756_at AT2G46950 CYP709B2, cytochrome P450, family 709, subfamily B, polypeptide 2 -0.684 0.201
65 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.651 0.146
66 256464_at AT1G32560 AtLEA4-1, Late Embryogenesis Abundant 4-1, LEA4-1, Late Embryogenesis Abundant 4-1 -0.640 0.087
67 258094_at AT3G14690 CYP72A15, cytochrome P450, family 72, subfamily A, polypeptide 15 -0.606 0.061
68 253999_at AT4G26200 ACCS7, 1-amino-cyclopropane-1-carboxylate synthase 7, ACS7, 1-amino-cyclopropane-1-carboxylate synthase 7, ATACS7 -0.602 0.133
69 263482_at AT2G03980 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.601 0.025
70 248311_at AT5G52570 B2, BCH2, BETA CAROTENOID HYDROXYLASE 2, BETA-OHASE 2, beta-carotene hydroxylase 2, CHY2 -0.592 0.304
71 261221_at AT1G19960 unknown -0.572 0.345
72 252115_at AT3G51600 LTP5, lipid transfer protein 5 -0.541 0.125
73 250949_at AT5G03510 [C2H2-type zinc finger family protein] -0.533 0.002
74 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 -0.530 0.329
75 246440_at AT5G17650 [glycine/proline-rich protein] -0.529 0.087
76 252347_at AT3G48130 RSU1 -0.521 0.037
77 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 -0.517 0.134
78 257925_at AT3G23170 unknown -0.479 0.072
79 260560_at AT2G43590 [Chitinase family protein] -0.455 0.188
80 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 -0.440 0.015
81 253919_at AT4G27350 unknown -0.431 0.027
82 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 -0.429 0.225
83 245034_at AT2G26390 [Serine protease inhibitor (SERPIN) family protein] -0.412 0.028
84 249811_at AT5G23760 [Copper transport protein family] -0.410 -0.063
85 245789_at AT1G32090 [early-responsive to dehydration stress protein (ERD4)] -0.409 0.081
86 255659_at AT4G00895 [ATPase, F1 complex, OSCP/delta subunit protein] -0.401 0.065
87 249870_at AT5G23080 TGH, TOUGH -0.391 0.072
88 251336_at AT3G61190 BAP1, BON association protein 1 -0.391 0.064
89 245208_at AT5G12330 LRP1, LATERAL ROOT PRIMORDIUM 1 -0.387 0.087
90 253776_at AT4G28390 AAC3, ADP/ATP carrier 3, ATAAC3 -0.375 0.168
91 248624_at AT5G48790 unknown -0.371 0.057
92 264385_at AT1G12020 unknown -0.369 0.240
93 257611_at AT3G26580 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.358 0.004
94 262915_at AT1G59940 ARR3, response regulator 3 -0.347 -0.009
95 252316_at AT3G48700 ATCXE13, carboxyesterase 13, CXE13, carboxyesterase 13 -0.346 0.090
96 259106_at AT3G05490 RALFL22, ralf-like 22 -0.343 0.008
97 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 -0.341 0.252
98 256856_at AT3G15110 unknown -0.335 0.077
99 260261_at AT1G68450 PDE337, PIGMENT DEFECTIVE 337 -0.334 0.187
100 261751_at AT1G76080 ATCDSP32, ARABIDOPSIS THALIANA CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD, CDSP32, chloroplastic drought-induced stress protein of 32 kD -0.334 0.038
101 267451_at AT2G33710 [Integrase-type DNA-binding superfamily protein] -0.330 -0.060
102 263688_at AT1G26920 unknown -0.329 0.010
103 247126_at AT5G66080 APD9, Arabidopsis Pp2c clade D 9 -0.326 0.205
104 256114_at AT1G16850 unknown -0.319 0.087
105 248819_at AT5G47050 [SBP (S-ribonuclease binding protein) family protein] -0.318 0.066
106 254715_at AT4G13550 [triglyceride lipases] -0.318 0.079
107 261508_at AT1G71730 unknown -0.315 0.053
108 266617_at AT2G29670 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.310 0.207
109 250344_at AT5G11930 [Thioredoxin superfamily protein] -0.310 0.012
110 258682_at AT3G08720 ATPK19, Arabidopsis thaliana protein kinase 19, ATPK2, ARABIDOPSIS THALIANA PROTEIN KINASE 2, ATS6K2, ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2, S6K2, serine/threonine protein kinase 2 -0.304 0.068
111 255479_at AT4G02380 AtLEA5, Arabidopsis thaliana late embryogenensis abundant like 5, SAG21, senescence-associated gene 21 -0.301 0.083