4.0:Information of module
root longitudinal zone-1 low sulfur
In comparison with SHR-GR Time 12H Dex help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006220 pyrimidine nucleotide metabolic process BP 8.594e-14
GO:0009218 pyrimidine ribonucleotide metabolic proc... BP 1.054e-13
GO:0009165 nucleotide biosynthetic process BP 1.535e-13
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0035966 response to topologically incorrect prot... BP 1.144e-05
GO:0010035 response to inorganic substance BP 1.208e-04
GO:0050896 response to stimulus BP 1.465e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root longitudinal zone-1 low sulfur		 Log2 signal ratio
SHR-GR Time 12H Dex
1 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.900 -0.197
2 259899_at AT1G71210 [Pentatricopeptide repeat (PPR) superfamily protein] 0.789 0.218
3 249836_at AT5G23420 HMGB6, high-mobility group box 6 0.745 0.221
4 245876_at AT1G26230 Cpn60beta4, chaperonin-60beta4 0.735 0.118
5 248057_at AT5G55520 unknown 0.714 0.410
6 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] 0.707 -0.091
7 245617_at AT4G14490 [SMAD/FHA domain-containing protein ] 0.684 0.355
8 262081_at AT1G59540 ZCF125 0.631 0.215
9 262702_at AT1G16220 [Protein phosphatase 2C family protein] 0.624 0.149
10 250586_at AT5G07630 [lipid transporters] 0.623 0.151
11 247028_at AT5G67100 ICU2, INCURVATA2 0.603 -0.004
12 254156_at AT4G24490 ATRGTA1, RAB geranylgeranyl transferase alpha subunit 1, RGTA1, RAB geranylgeranyl transferase alpha subunit 1 0.602 0.028
13 259930_at AT1G34355 ATPS1, PARALLEL SPINDLE 1, PS1, PARALLEL SPINDLE 1 0.600 0.354
14 260126_at AT1G36370 SHM7, serine hydroxymethyltransferase 7 0.595 0.091
15 251718_at AT3G56100 IMK3, MRLK, meristematic receptor-like kinase 0.586 0.385
16 249430_at AT5G39900 [Small GTP-binding protein] 0.583 0.068
17 265887_at AT2G25710 HCS1, holocarboxylase synthase 1 0.566 0.140
18 253969_at AT4G26430 CSN6B, COP9 signalosome subunit 6B 0.555 0.246
19 248874_at AT5G46460 [Pentatricopeptide repeat (PPR) superfamily protein] 0.544 0.105
20 265011_at AT1G24490 ALB4, ALBINA 4, ARTEMIS, ARABIDOPSIS THALIANA ENVELOPE MEMBRANE INTEGRASE 0.530 0.098
21 254490_at AT4G20320 [CTP synthase family protein] 0.525 0.247
22 267224_at AT2G43990 unknown 0.525 0.154
23 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 0.522 0.073
24 254111_at AT4G24890 ATPAP24, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, PAP24, purple acid phosphatase 24 0.519 -0.437
25 266136_at AT2G45060 [Uncharacterised conserved protein UCP022280] 0.518 0.048
26 259321_at AT3G01040 GAUT13, galacturonosyltransferase 13 0.518 -0.029
27 256077_at AT1G18090 [5'-3' exonuclease family protein] 0.517 0.081
28 250395_at AT5G10950 [Tudor/PWWP/MBT superfamily protein] 0.515 0.062
29 245869_at AT1G26330 [DNA binding] 0.498 0.143
30 246415_at AT5G17160 unknown 0.489 0.233
31 258951_at AT3G01380 [transferases] 0.489 0.110
32 250087_at AT5G17270 [Protein prenylyltransferase superfamily protein] 0.487 0.060
33 257554_at AT3G24890 ATVAMP728, VAMP728, vesicle-associated membrane protein 728 0.476 -0.005
34 261248_at AT1G20030 [Pathogenesis-related thaumatin superfamily protein] 0.476 0.270
35 249426_at AT5G39840 [ATP-dependent RNA helicase, mitochondrial, putative] 0.471 0.172
36 246683_at AT5G33300 [chromosome-associated kinesin-related] 0.462 0.030
37 250654_at AT5G06940 [Leucine-rich repeat receptor-like protein kinase family protein] 0.459 0.129
38 247667_at AT5G60150 unknown 0.459 0.198
39 248131_at AT5G54830 [DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein] 0.458 0.097
40 265349_at AT2G22610 [Di-glucose binding protein with Kinesin motor domain] 0.456 0.199
41 250531_at AT5G08650 [Small GTP-binding protein] 0.456 0.163
42 247190_at AT5G65420 CYCD4;1, CYCLIN D4;1 0.455 -0.151
43 262693_at AT1G62780 unknown 0.452 0.049
44 261750_at AT1G76120 [Pseudouridine synthase family protein] 0.449 0.273
45 248498_at AT5G50390 EMB3141, EMBRYO DEFECTIVE 3141 0.448 0.051
46 266002_at AT2G37310 [Pentatricopeptide repeat (PPR) superfamily protein] 0.448 0.232
47 261384_at AT1G05440 [C-8 sterol isomerases] 0.447 0.463
48 263719_at AT2G13600 SLO2, SLOW GROWTH 2 0.446 -0.014
49 255866_at AT2G30350 [Excinuclease ABC, C subunit, N-terminal] 0.440 0.059
50 250309_at AT5G12220 [las1-like family protein] 0.439 0.040
51 261208_at AT1G12930 [ARM repeat superfamily protein] 0.439 0.126
52 264222_at AT1G60230 [Radical SAM superfamily protein] 0.438 0.128
53 262086_at AT1G56050 [GTP-binding protein-related] 0.435 0.173
54 246458_at AT5G16860 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.434 0.118
55 248737_at AT5G48120 MET18, homolog of yeast MET18 0.434 0.139
56 246409_at AT1G57700 [Protein kinase superfamily protein] 0.430 0.000
57 265309_at AT2G20290 ATXIG, MYOSIN XI G, XIG, myosin-like protein XIG 0.427 0.034
58 259411_at AT1G13410 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.425 0.130
59 247310_at AT5G63950 CHR24, chromatin remodeling 24 0.423 0.179
60 259851_at AT1G72250 [Di-glucose binding protein with Kinesin motor domain] 0.419 0.275
61 263039_at AT1G23280 [MAK16 protein-related] 0.409 0.133
62 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.409 -0.004
63 249129_at AT5G43080 CYCA3;1, Cyclin A3;1 0.408 0.073
64 253975_at AT4G26600 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.406 0.094
65 245109_at AT2G41520 DJC62, DNA J protein C62, TPR15, tetratricopeptide repeat 15 0.406 0.134
66 266529_at AT2G16880 [Pentatricopeptide repeat (PPR) superfamily protein] 0.405 0.117
67 264259_at AT1G09290 unknown 0.404 0.124
68 259600_at AT1G35220 unknown 0.403 -0.053
69 264761_at AT1G61280 [Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit] 0.400 -0.044
70 246734_at AT5G27680 RECQSIM, RECQ helicase SIM 0.400 0.069
71 261463_at AT1G07740 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.398 0.143
72 260297_at AT1G80280 [alpha/beta-Hydrolases superfamily protein] 0.391 0.038
73 259222_at AT3G03680 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.388 0.235
74 249388_at AT5G40090 CHL1, CHS1-like 1 0.385 0.186
75 266539_at AT2G35160 SGD9, SET DOMAIN-CONTAINING PROTEIN 9, SUVH5, SU(VAR)3-9 homolog 5 0.381 0.111
76 250418_at AT5G11240 [transducin family protein / WD-40 repeat family protein] 0.377 0.139
77 245972_at AT5G20680 TBL16, TRICHOME BIREFRINGENCE-LIKE 16 0.369 0.030
78 251262_at AT3G62080 [SNF7 family protein] 0.365 0.009
79 258174_at AT3G21470 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.363 0.082
80 267163_at AT2G37520 [Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain] 0.362 0.064
81 263415_at AT2G17250 EMB2762, EMBRYO DEFECTIVE 2762, NOC4, NucleOlar Complex associated 4 0.355 0.015
82 264228_at AT1G67490 GCS1, glucosidase 1, KNF, KNOPF 0.354 0.063
83 246005_at AT5G08415 LIP1, lipoyl synthase 1 0.352 0.098
84 260636_at AT1G62430 ATCDS1, CDP-diacylglycerol synthase 1, CDS1, CDP-diacylglycerol synthase 1 0.352 0.078
85 261604_at AT1G49590 ZOP1, Zinc-finger and OCRE domain-containing Protein 1 0.351 0.077
86 260242_at AT1G63650 AtEGL3, ATMYC-2, EGL1, EGL3, ENHANCER OF GLABRA 3 0.350 -0.104
87 262477_at AT1G11220 unknown 0.348 0.316
88 247500_at AT5G61910 [DCD (Development and Cell Death) domain protein] 0.345 0.044
89 251244_at AT3G62060 [Pectinacetylesterase family protein] 0.345 0.153
90 254664_at AT4G18300 [Trimeric LpxA-like enzyme] 0.342 0.201
91 252351_at AT3G48210 unknown 0.342 0.163
92 246424_at AT5G17020 ATCRM1, ATXPO1, ARABIDOPSIS THALIANA EXPORTIN 1, HIT2, HEAT-INTOLERANT 2, XPO1, EXPORTIN 1, XPO1A, exportin 1A 0.342 0.085
93 251680_at AT3G57060 [binding] 0.341 0.247
94 257066_at AT3G18280 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.950 -0.206
95 266259_at AT2G27830 unknown -0.911 -0.093
96 250323_at AT5G12880 [proline-rich family protein] -0.876 -0.176
97 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] -0.812 -0.107
98 261657_at AT1G50050 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.768 -0.150
99 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] -0.756 -0.199
100 266119_at AT2G02100 LCR69, low-molecular-weight cysteine-rich 69, PDF2.2 -0.708 -0.077
101 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.678 -0.056
102 245794_at AT1G32170 XTH30, xyloglucan endotransglucosylase/hydrolase 30, XTR4, xyloglucan endotransglycosylase 4 -0.628 -0.141
103 245906_at AT5G11070 unknown -0.620 -0.171
104 247435_at AT5G62480 ATGSTU9, glutathione S-transferase tau 9, GST14, GLUTATHIONE S-TRANSFERASE 14, GST14B, GLUTATHIONE S-TRANSFERASE 14B, GSTU9, glutathione S-transferase tau 9 -0.612 0.139
105 254919_at AT4G11360 RHA1B, RING-H2 finger A1B -0.609 -0.040
106 263937_at AT2G35910 [RING/U-box superfamily protein] -0.603 -0.139
107 257859_at AT3G12955 SAUR74, SMALL AUXIN UPREGULATED RNA 74 -0.592 -0.011
108 260531_at AT2G47240 CER8, ECERIFERUM 8, LACS1, LONG-CHAIN ACYL-COA SYNTHASE 1 -0.587 -0.099
109 256336_at AT1G72030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.586 -0.089
110 247061_at AT5G66780 unknown -0.580 -0.001
111 246108_at AT5G28630 [glycine-rich protein] -0.562 -0.102
112 261221_at AT1G19960 unknown -0.557 -0.068
113 264005_at AT2G22470 AGP2, arabinogalactan protein 2, ATAGP2 -0.556 -0.100
114 248311_at AT5G52570 B2, BCH2, BETA CAROTENOID HYDROXYLASE 2, BETA-OHASE 2, beta-carotene hydroxylase 2, CHY2 -0.553 0.012
115 245555_at AT4G15390 [HXXXD-type acyl-transferase family protein] -0.544 -0.128
116 245386_at AT4G14010 RALFL32, ralf-like 32 -0.542 -0.121
117 259008_at AT3G09390 ATMT-1, ARABIDOPSIS THALIANA METALLOTHIONEIN-1, ATMT-K, ARABIDOPSIS THALIANA METALLOTHIONEIN-K, MT2A, metallothionein 2A -0.529 0.174
118 262505_at AT1G21680 [DPP6 N-terminal domain-like protein] -0.523 -0.052
119 262705_at AT1G16260 [Wall-associated kinase family protein] -0.517 -0.127
120 262916_at AT1G59700 ATGSTU16, glutathione S-transferase TAU 16, GSTU16, glutathione S-transferase TAU 16 -0.516 -0.101
121 259479_at AT1G19020 unknown -0.516 -0.087
122 257650_at AT3G16800 [Protein phosphatase 2C family protein] -0.510 0.028
123 258306_at AT3G30530 ATBZIP42, basic leucine-zipper 42, bZIP42, basic leucine-zipper 42 -0.508 -0.001
124 258248_at AT3G29140 unknown -0.501 0.023
125 260983_at AT1G53560 [Ribosomal protein L18ae family] -0.490 -0.311
126 264720_at AT1G70080 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.488 -0.098
127 267226_at AT2G44010 unknown -0.488 -0.119
128 254187_at AT4G23890 CRR31, CHLORORESPIRATORY REDUCTION 31, NdhS, NADH dehydrogenase-like complex S -0.483 -0.110
129 249493_at AT5G39080 [HXXXD-type acyl-transferase family protein] -0.475 -0.156
130 253827_at AT4G28085 unknown -0.465 -0.180
131 261265_at AT1G26800 [RING/U-box superfamily protein] -0.464 -0.094
132 262539_at AT1G17200 [Uncharacterised protein family (UPF0497)] -0.460 -0.171
133 259272_at AT3G01290 AtHIR2, HIR2, hypersensitive induced reaction 2 -0.459 -0.121
134 252053_at AT3G52400 ATSYP122, SYP122, syntaxin of plants 122 -0.458 -0.032
135 246440_at AT5G17650 [glycine/proline-rich protein] -0.453 -0.074
136 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 -0.452 -0.270
137 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 -0.451 0.133
138 262884_at AT1G64720 CP5 -0.439 -0.081
139 247407_at AT5G62900 unknown -0.436 -0.011
140 247851_at AT5G58070 ATTIL, TEMPERATURE-INDUCED LIPOCALIN, TIL, temperature-induced lipocalin -0.436 0.026
141 254200_at AT4G24110 unknown -0.434 -0.070
142 259454_at AT1G44050 [Cysteine/Histidine-rich C1 domain family protein] -0.434 -0.046
143 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] -0.433 0.096
144 253776_at AT4G28390 AAC3, ADP/ATP carrier 3, ATAAC3 -0.433 0.038
145 253527_at AT4G31470 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.430 -0.172
146 252993_at AT4G38540 [FAD/NAD(P)-binding oxidoreductase family protein] -0.426 -0.032
147 265169_x_at AT1G23720 [Proline-rich extensin-like family protein] -0.422 -0.024
148 260876_at AT1G21460 AtSWEET1, SWEET1 -0.420 0.015
149 252115_at AT3G51600 LTP5, lipid transfer protein 5 -0.419 -0.221
150 264772_at AT1G22930 [T-complex protein 11] -0.417 -0.064
151 247745_at AT5G59030 COPT1, copper transporter 1 -0.417 -0.039
152 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 -0.408 0.398
153 262162_at AT1G78020 unknown -0.404 0.033
154 266514_at AT2G47890 [B-box type zinc finger protein with CCT domain] -0.401 -0.006
155 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 -0.401 -0.158
156 255794_at AT2G33480 ANAC041, NAC domain containing protein 41, NAC041, NAC domain containing protein 41 -0.400 -0.003
157 251073_at AT5G01750 unknown -0.400 -0.076
158 257654_at AT3G13310 DJC66, DNA J protein C66 -0.395 -0.013
159 266756_at AT2G46950 CYP709B2, cytochrome P450, family 709, subfamily B, polypeptide 2 -0.391 -0.018
160 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 -0.387 -0.103
161 247553_at AT5G60910 AGL8, AGAMOUS-like 8, FUL, FRUITFULL -0.386 0.033
162 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 -0.385 -0.089
163 261026_at AT1G01240 unknown -0.383 -0.121
164 253999_at AT4G26200 ACCS7, 1-amino-cyclopropane-1-carboxylate synthase 7, ACS7, 1-amino-cyclopropane-1-carboxylate synthase 7, ATACS7 -0.378 -0.021
165 247394_at AT5G62865 unknown -0.376 -0.175
166 254790_at AT4G12800 PSAL, photosystem I subunit l -0.375 -0.120
167 262749_at AT1G28580 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.371 -0.101
168 253922_at AT4G26850 VTC2, vitamin c defective 2 -0.369 -0.121
169 258263_at AT3G15780 unknown -0.367 -0.104
170 264082_at AT2G28570 unknown -0.363 -0.036
171 249139_at AT5G43170 AZF3, zinc-finger protein 3, ZF3, zinc-finger protein 3 -0.363 0.016
172 245913_at AT5G19860 unknown -0.362 -0.131
173 253302_at AT4G33660 unknown -0.361 -0.117
174 249769_at AT5G24120 ATSIG5, SIGMA FACTOR 5, SIG5, SIGMA FACTOR 5, SIGE, sigma factor E -0.360 -0.135
175 260567_at AT2G43820 ATSAGT1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, GT, SAGT1, salicylic acid glucosyltransferase 1, SGT1, UDP-glucose:salicylic acid glucosyltransferase 1, UGT74F2, UDP-glucosyltransferase 74F2 -0.358 -0.196
176 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 -0.358 0.052
177 259340_at AT3G03870 unknown -0.353 -0.034
178 250670_at AT5G06860 ATPGIP1, POLYGALACTURONASE INHIBITING PROTEIN 1, PGIP1, polygalacturonase inhibiting protein 1 -0.350 -0.073
179 252956_at AT4G38580 ATFP6, farnesylated protein 6, FP6, farnesylated protein 6, HIPP26, HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 -0.349 0.018
180 263669_at AT1G04400 AT-PHH1, ATCRY2, CRY2, cryptochrome 2, FHA, PHH1 -0.347 -0.067
181 252976_s_at AT4G38550 [Arabidopsis phospholipase-like protein (PEARLI 4) family] -0.346 -0.085
182 261551_at AT1G63440 HMA5, heavy metal atpase 5 -0.343 0.082
183 257600_at AT3G24770 CLE41, CLAVATA3/ESR-RELATED 41 -0.342 0.027
184 255516_at AT4G02270 RHS13, root hair specific 13 -0.341 -0.121
185 261083_at AT1G07310 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.341 0.045