4.0:Information of module
Whole root - S 24H
In comparison with GA4 3 h (ga1 seed) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010583 response to cyclopentenone BP 1.712e-10
GO:0042221 response to chemical BP 1.413e-09
GO:0009407 toxin catabolic process BP 1.513e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 1.927e-11
GO:0010053 root epidermal cell differentiation BP 4.646e-11
GO:0090627 plant epidermal cell differentiation BP 1.080e-10
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Whole root - S 24H		 Log2 signal ratio
GA4 3 h (ga1 seed)
1 267389_at AT2G44460 BGLU28, beta glucosidase 28 1.109 0.348
2 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 1.106 0.124
3 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 1.082 0.752
4 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 0.997 -0.165
5 246250_at AT4G36880 CP1, cysteine proteinase1, RDL1, RD21A-LIKE PROTEASE1 0.581 1.011
6 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.573 0.287
7 260408_at AT1G69880 ATH8, thioredoxin H-type 8, TH8, thioredoxin H-type 8 0.485 -0.099
8 255075_at AT4G09110 [RING/U-box superfamily protein] 0.469 0.023
9 253525_at AT4G31330 unknown 0.407 -0.055
10 261475_at AT1G14550 [Peroxidase superfamily protein] 0.406 0.134
11 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.390 0.554
12 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.389 0.386
13 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.379 -0.165
14 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 0.367 -0.020
15 256454_at AT1G75280 [NmrA-like negative transcriptional regulator family protein] 0.353 -0.427
16 257262_at AT3G21890 BBX31, B-box domain protein 31 0.341 -0.109
17 252989_at AT4G38420 sks9, SKU5 similar 9 0.340 -0.257
18 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.334 0.073
19 249494_at AT5G39050 PMAT1, phenolic glucoside malonyltransferase 1 0.333 0.333
20 255284_at AT4G04610 APR, APR1, APS reductase 1, ATAPR1, PRH19, PAPS REDUCTASE HOMOLOG 19 0.315 -0.059
21 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.297 1.035
22 256244_at AT3G12520 SULTR4;2, sulfate transporter 4;2 0.295 0.348
23 260540_at AT2G43500 NLP8, NIN-like protein 8 0.295 1.104
24 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.287 0.589
25 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] 0.279 -0.618
26 261441_at AT1G28470 ANAC010, NAC domain containing protein 10, NAC010, NAC domain containing protein 10, SND3, SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 3 0.273 -0.076
27 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.258 0.588
28 258179_at AT3G21690 [MATE efflux family protein] 0.256 0.170
29 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.244 -0.358
30 249108_at AT5G43690 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.244 -0.065
31 264745_at AT1G62180 5'adenylylphosphosulfate reductase 2 0.243 0.004
32 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.237 -0.010
33 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.234 -0.063
34 245855_at AT5G13550 SULTR4;1, sulfate transporter 4.1 0.230 -0.151
35 263892_at AT2G36890 ATMYB38, MYB DOMAIN PROTEIN 38, BIT1, BLUE INSENSITIVE TRAIT 1, MYB38, MYB DOMAIN PROTEIN 38, RAX2, REGULATOR OF AXILLARY MERISTEMS 2 0.229 -0.280
36 265582_at AT2G20030 [RING/U-box superfamily protein] 0.227 -0.144
37 258167_at AT3G21560 BRT1, Bright Trichomes 1, UGT84A2, UDP-glucosyl transferase 84A2 0.223 0.350
38 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.223 -0.243
39 246537_at AT5G15940 [NAD(P)-binding Rossmann-fold superfamily protein] 0.221 -0.133
40 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 0.221 0.184
41 251096_at AT5G01550 LecRK-VI.3, L-type lectin receptor kinase VI.3, LECRKA4.2, lectin receptor kinase a4.1 0.215 -0.094
42 262525_at AT1G17060 CHI2, CHIBI 2, CYP72C1, cytochrome p450 72c1, SHK1, SHRINK 1, SOB7, SUPPRESSOR OF PHYB-4 7 0.214 0.030
43 246584_at AT5G14730 unknown 0.214 -0.264
44 251060_at AT5G01820 ATCIPK14, ATSR1, serine/threonine protein kinase 1, CIPK14, CBL-INTERACTING PROTEIN KINASE 14, PKS24, SOS2-like protein kinase 24, SnRK3.15, SNF1-RELATED PROTEIN KINASE 3.15, SR1, serine/threonine protein kinase 1 0.200 0.067
45 259228_at AT3G07720 [Galactose oxidase/kelch repeat superfamily protein] 0.192 0.122
46 248481_at AT5G50930 [Histone superfamily protein] 0.192 0.037
47 256453_at AT1G75270 DHAR2, dehydroascorbate reductase 2 0.191 0.001
48 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 0.187 1.071
49 263376_at AT2G20520 FLA6, FASCICLIN-like arabinogalactan 6 -0.721 -1.005
50 261157_at AT1G34510 [Peroxidase superfamily protein] -0.674 -1.130
51 267045_at AT2G34180 ATWL2, WPL4-LIKE 2, CIPK13, CBL-interacting protein kinase 13, SnRK3.7, SNF1-RELATED PROTEIN KINASE 3.7, WL2, WPL4-LIKE 2 -0.528 -0.116
52 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 -0.518 0.422
53 265611_at AT2G25510 unknown -0.502 -1.431
54 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 -0.482 -0.166
55 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.395 -0.969
56 261453_at AT1G21130 IGMT4, indole glucosinolate O-methyltransferase 4 -0.390 -0.652
57 255177_at AT4G08040 ACS11, 1-aminocyclopropane-1-carboxylate synthase 11 -0.385 -0.145
58 256352_at AT1G54970 ATPRP1, proline-rich protein 1, PRP1, proline-rich protein 1, RHS7, ROOT HAIR SPECIFIC 7 -0.380 -1.076
59 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 -0.359 -1.153
60 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 -0.344 -0.118
61 263737_at AT1G60010 unknown -0.323 -1.104
62 264403_at AT2G25150 [HXXXD-type acyl-transferase family protein] -0.319 -0.473
63 245567_at AT4G14630 GLP9, germin-like protein 9 -0.304 -0.538
64 245966_at AT5G19790 RAP2.11, related to AP2 11 -0.303 -0.784
65 255516_at AT4G02270 RHS13, root hair specific 13 -0.283 -1.509
66 264029_at AT2G03720 MRH6, morphogenesis of root hair 6 -0.279 -0.524
67 249037_at AT5G44130 FLA13, FASCICLIN-like arabinogalactan protein 13 precursor -0.275 -1.072
68 255881_at AT1G67070 DIN9, DARK INDUCIBLE 9, PMI2, PHOSPHOMANNOSE ISOMERASE 2 -0.263 -0.360
69 259076_at AT3G02140 AFP4, ABI FIVE BINDING PROTEIN 4, TMAC2, TWO OR MORE ABRES-CONTAINING GENE 2 -0.258 0.543
70 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 -0.250 -0.714
71 251336_at AT3G61190 BAP1, BON association protein 1 -0.244 0.053
72 253244_at AT4G34580 AtSFH1, COW1, CAN OF WORMS1, SRH1, SHORT ROOT HAIR 1 -0.239 -0.808
73 247710_at AT5G59260 LecRK-II.1, L-type lectin receptor kinase II.1 -0.235 -0.042
74 257668_at AT3G20460 [Major facilitator superfamily protein] -0.232 -0.491
75 251226_at AT3G62680 ATPRP3, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 3, PRP3, proline-rich protein 3 -0.231 -1.389
76 255632_at AT4G00680 ADF8, actin depolymerizing factor 8 -0.223 -1.047
77 253908_at AT4G27260 GH3.5, WES1 -0.222 -0.356
78 257315_at AT3G30775 AT-POX, ATPDH, ATPOX, ARABIDOPSIS THALIANA PROLINE OXIDASE, ERD5, EARLY RESPONSIVE TO DEHYDRATION 5, PDH1, proline dehydrogenase 1, PRO1, PRODH, PROLINE DEHYDROGENASE -0.222 0.023
79 267483_at AT2G02810 ATUTR1, UDP-GALACTOSE TRANSPORTER 1, UTR1, UDP-galactose transporter 1 -0.218 0.097
80 266265_at AT2G29340 [NAD-dependent epimerase/dehydratase family protein] -0.213 -0.181
81 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 -0.212 -1.398
82 248186_at AT5G53880 unknown -0.198 -0.528
83 259947_at AT1G71530 [Protein kinase superfamily protein] -0.191 -0.006
84 256671_at AT3G52290 IQD3, IQ-domain 3 -0.186 -0.242
85 264551_at AT1G09460 [Carbohydrate-binding X8 domain superfamily protein] -0.185 0.038
86 252987_at AT4G38390 RHS17, root hair specific 17 -0.182 -0.161
87 265658_at AT2G13810 ALD1, AGD2-like defense response protein 1, AtALD1, EDTS5, eds two suppressor 5 -0.178 -0.032
88 253534_at AT4G31500 ATR4, ALTERED TRYPTOPHAN REGULATION 4, CYP83B1, cytochrome P450, family 83, subfamily B, polypeptide 1, RED1, RED ELONGATED 1, RNT1, RUNT 1, SUR2, SUPERROOT 2 -0.177 -0.386
89 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 -0.176 -0.644
90 256128_at AT1G18140 ATLAC1, LAC1, laccase 1 -0.175 -0.724
91 264781_at AT1G08540 ABC1, ATSIG1, SIGMA FACTOR 1, ATSIG2, SIGMA FACTOR 2, SIG1, RNA POLYMERASE SIGMA SUBUNIT 1, SIG2, RNApolymerase sigma subunit 2, SIGA, SIGB, SIGMA FACTOR B -0.173 -0.292
92 250640_at AT5G07150 [Leucine-rich repeat protein kinase family protein] -0.167 0.064
93 250685_at AT5G06670 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.161 0.075
94 251310_at AT3G61150 HD-GL2-1, HOMEODOMAIN-GLABRA2 1, HDG1, homeodomain GLABROUS 1 -0.161 0.055
95 253734_at AT4G29180 RHS16, root hair specific 16 -0.159 -0.567