4.0:Information of module
MPK6 ox Shoot Hypoxia
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0002376 immune system process BP 1.175e-17
GO:0010033 response to organic substance BP 1.967e-17
GO:0036293 response to decreased oxygen levels BP 6.037e-17
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048316 seed development BP 2.439e-09
GO:0010154 fruit development BP 4.696e-09
GO:0009793 embryo development ending in seed dorman... BP 1.364e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
MPK6 ox Shoot Hypoxia		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 250464_at AT5G10040 unknown 1.582 -0.738
2 247024_at AT5G66985 unknown 1.459 1.281
3 255807_at AT4G10270 [Wound-responsive family protein] 1.404 0.558
4 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 1.303 0.950
5 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 1.246 1.278
6 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] 1.196 0.757
7 259879_at AT1G76650 CML38, calmodulin-like 38 1.183 0.043
8 247431_at AT5G62520 SRO5, similar to RCD one 5 1.121 1.081
9 257925_at AT3G23170 unknown 1.066 1.028
10 253298_at AT4G33560 [Wound-responsive family protein] 1.040 0.411
11 252882_at AT4G39675 unknown 1.036 0.968
12 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] 0.943 0.231
13 254200_at AT4G24110 unknown 0.890 -0.184
14 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.859 0.468
15 250152_at AT5G15120 unknown 0.823 0.246
16 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 0.791 0.233
17 249384_at AT5G39890 unknown 0.757 0.751
18 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.737 0.827
19 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.692 -0.445
20 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.656 -0.836
21 260668_at AT1G19530 unknown 0.590 0.667
22 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 0.582 -0.897
23 261567_at AT1G33055 unknown 0.567 0.578
24 260727_at AT1G48100 [Pectin lyase-like superfamily protein] 0.561 -0.864
25 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.537 1.428
26 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.526 1.195
27 260451_at AT1G72360 AtERF73, ERF73, ethylene response factor 73, HRE1, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 0.522 -0.657
28 256366_at AT1G66880 [Protein kinase superfamily protein] 0.502 -0.661
29 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.500 -0.206
30 253864_at AT4G27460 CBSX5, CBS domain containing protein 5 0.495 -0.581
31 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.481 -0.407
32 253060_at AT4G37710 [VQ motif-containing protein] 0.448 -1.482
33 266965_at AT2G39510 UMAMIT14, Usually multiple acids move in and out Transporters 14 0.443 -0.879
34 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.443 0.177
35 249234_at AT5G42200 [RING/U-box superfamily protein] 0.442 -0.452
36 255753_at AT1G18570 AtMYB51, myb domain protein 51, BW51A, BW51B, HIG1, HIGH INDOLIC GLUCOSINOLATE 1, MYB51, myb domain protein 51 0.430 0.258
37 248160_at AT5G54470 BBX29, B-box domain protein 29 0.423 0.478
38 262045_at AT1G80240 DGR1, DUF642 L-GalL responsive gene 1 0.422 -0.847
39 245401_at AT4G17670 unknown 0.421 0.414
40 257922_at AT3G23150 ETR2, ethylene response 2 0.419 0.895
41 247524_at AT5G61440 ACHT5, atypical CYS HIS rich thioredoxin 5 0.414 0.224
42 266393_at AT2G41260 ATM17, M17 -1.311 -0.905
43 264079_at AT2G28490 [RmlC-like cupins superfamily protein] -1.284 0.611
44 265211_at AT2G36640 ATECP63, embryonic cell protein 63, ECP63, embryonic cell protein 63 -1.209 0.587
45 250468_at AT5G10120 [Ethylene insensitive 3 family protein] -1.171 -0.003
46 264612_at AT1G04560 [AWPM-19-like family protein] -1.151 0.856
47 258347_at AT3G17520 [Late embryogenesis abundant protein (LEA) family protein] -1.139 -0.014
48 253894_at AT4G27150 AT2S2, SESA2, seed storage albumin 2 -1.136 -0.050
49 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 -1.120 -0.299
50 266544_at AT2G35300 AtLEA4-2, late embryogenesis abundant 4-2, LEA18, late embryogenesis abundant 18, LEA4-2, late embryogenesis abundant 4-2 -1.103 0.178
51 251838_at AT3G54940 [Papain family cysteine protease] -1.080 0.822
52 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 -1.071 0.043
53 256354_at AT1G54870 [NAD(P)-binding Rossmann-fold superfamily protein] -1.064 -0.278
54 249353_at AT5G40420 OLE2, OLEOSIN 2, OLEO2, oleosin 2 -1.058 0.193
55 252019_at AT3G53040 [late embryogenesis abundant protein, putative / LEA protein, putative] -1.030 -0.515
56 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] -0.938 1.076
57 256464_at AT1G32560 AtLEA4-1, Late Embryogenesis Abundant 4-1, LEA4-1, Late Embryogenesis Abundant 4-1 -0.925 0.946
58 253904_at AT4G27140 AT2S1, SESA1, seed storage albumin 1 -0.900 0.379
59 266143_at AT2G38905 [Low temperature and salt responsive protein family] -0.890 1.065
60 246273_at AT4G36700 [RmlC-like cupins superfamily protein] -0.844 -0.111
61 247437_at AT5G62490 ATHVA22B, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE B, HVA22B, HVA22 homologue B -0.832 0.536
62 257130_at AT3G20210 DELTA-VPE, delta vacuolar processing enzyme, DELTAVPE, DELTA VACUOLAR PROCESSING ENZYME -0.824 1.317
63 256815_at AT3G21380 [Mannose-binding lectin superfamily protein] -0.822 0.431
64 245161_at AT2G33070 ATNSP2, NITRILE-SPECIFIER PROTEIN 2, NSP2, nitrile specifier protein 2 -0.815 0.252
65 259615_at AT1G47980 unknown -0.799 -0.793
66 266654_at AT2G25890 [Oleosin family protein] -0.789 0.496
67 255905_at AT1G17810 BETA-TIP, beta-tonoplast intrinsic protein -0.761 -0.329
68 250868_at AT5G03860 MLS, malate synthase -0.731 1.657
69 246242_at AT4G36600 [Late embryogenesis abundant (LEA) protein] -0.713 -0.357
70 257947_at AT3G21720 ICL, isocitrate lyase -0.691 0.785
71 251977_at AT3G53250 SAUR57, SMALL AUXIN UPREGULATED RNA 57 -0.689 -0.310
72 251580_at AT3G58450 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.687 0.561
73 263385_at AT2G40170 ATEM6, ARABIDOPSIS EARLY METHIONINE-LABELLED 6, EM6, EARLY METHIONINE-LABELLED 6, GEA6, LATE EMBRYOGENESIS ABUNDANT 6 -0.677 -0.731
74 258489_at AT3G02520 GF14 NU, GRF7, general regulatory factor 7 -0.675 0.353
75 256338_at AT1G72100 [late embryogenesis abundant domain-containing protein / LEA domain-containing protein] -0.674 0.262
76 251137_at AT5G01300 [PEBP (phosphatidylethanolamine-binding protein) family protein] -0.626 -0.501
77 259578_at AT1G27990 unknown -0.600 -0.501
78 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE -0.593 0.513
79 249937_at AT5G22470 [NAD+ ADP-ribosyltransferases] -0.573 0.054
80 266711_at AT2G46740 AtGulLO5, GulLO5, L -gulono-1,4-lactone ( L -GulL) oxidase 5 -0.527 0.826
81 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE -0.504 0.206