4.0:Information of module
phyABCDE 4-day dark- 2 hours Rc50
In comparison with HopZ1a treated ulp1c ulp1d help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042538 hyperosmotic salinity response BP 1.014e-05
GO:0006972 hyperosmotic response BP 5.928e-05
GO:0006970 response to osmotic stress BP 1.886e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010638 positive regulation of organelle organiz... BP 3.022e-07
GO:0051130 positive regulation of cellular componen... BP 4.585e-07
GO:0007155 cell adhesion BP 1.382e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
phyABCDE 4-day dark- 2 hours Rc50		 Log2 signal ratio
HopZ1a treated ulp1c ulp1d
1 248218_at AT5G53710 unknown 0.532 0.661
2 251377_at AT3G60650 unknown 0.374 0.108
3 245346_at AT4G17090 AtBAM3, BAM3, BETA-AMYLASE 3, BMY8, BETA-AMYLASE 8, CT-BMY, chloroplast beta-amylase 0.292 -0.038
4 247228_at AT5G65140 TPPJ, trehalose-6-phosphate phosphatase J 0.264 0.324
5 263285_at AT2G36120 DOT1, DEFECTIVELY ORGANIZED TRIBUTARIES 1 0.250 0.126
6 259985_at AT1G76620 unknown 0.220 0.207
7 246519_at AT5G15780 [Pollen Ole e 1 allergen and extensin family protein] 0.215 0.004
8 264661_at AT1G09950 RAS1, RESPONSE TO ABA AND SALT 1 0.204 0.540
9 256759_at AT3G25640 unknown 0.193 0.255
10 265418_at AT2G20880 AtERF53, ERF53, ERF domain 53 0.190 0.520
11 261407_at AT1G18810 [phytochrome kinase substrate-related] 0.184 -0.318
12 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.179 0.880
13 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 0.179 0.325
14 247957_at AT5G57050 ABI2, ABA INSENSITIVE 2, AtABI2 0.165 0.381
15 248082_at AT5G55400 [Actin binding Calponin homology (CH) domain-containing protein] 0.164 0.112
16 250479_at AT5G10260 AtRABH1e, RAB GTPase homolog H1E, RABH1e, RAB GTPase homolog H1E 0.163 -0.019
17 267485_at AT2G02820 AtMYB88, myb domain protein 88, MYB88, myb domain protein 88 0.161 0.037
18 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.160 0.502
19 261951_at AT1G64490 [DEK, chromatin associated protein] 0.156 0.021
20 256990_at AT3G28590 unknown 0.153 0.015
21 245392_at AT4G15680 [Thioredoxin superfamily protein] 0.152 -0.028
22 258139_at AT3G24520 AT-HSFC1, HSFC1, heat shock transcription factor C1 0.147 0.411
23 249357_at AT5G40490 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.143 -0.014
24 253619_at AT4G30460 [glycine-rich protein] 0.143 0.474
25 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] 0.142 0.585
26 252665_at AT3G44140 unknown 0.134 0.052
27 250103_at AT5G16600 AtMYB43, myb domain protein 43, MYB43, myb domain protein 43 0.134 -0.055
28 253131_at AT4G35550 ATWOX13, HB-4, WOX13, WUSCHEL related homeobox 13 0.131 0.127
29 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 -0.218 -0.130
30 265609_at AT2G25420 [transducin family protein / WD-40 repeat family protein] -0.188 -0.153
31 254931_at AT4G11460 CRK30, cysteine-rich RLK (RECEPTOR-like protein kinase) 30 -0.184 -0.215
32 255433_at AT4G03210 XTH9, xyloglucan endotransglucosylase/hydrolase 9 -0.183 -0.663
33 249320_at AT5G40910 [Disease resistance protein (TIR-NBS-LRR class) family] -0.156 -0.385
34 256912_at AT3G23850 unknown -0.150 -0.025
35 258920_at AT3G10520 AHB2, haemoglobin 2, ARATH GLB2, ATGLB2, ARABIDOPSIS HEMOGLOBIN 2, GLB2, HEMOGLOBIN 2, HB2, haemoglobin 2, NSHB2, NON-SYMBIOTIC HAEMOGLOBIN 2 -0.140 -0.437
36 247789_at AT5G58680 [ARM repeat superfamily protein] -0.134 0.238
37 263104_at AT2G05120 [Nucleoporin, Nup133/Nup155-like] -0.131 -0.104
38 245869_at AT1G26330 [DNA binding] -0.129 -0.106
39 261786_at AT1G15990 ATCNGC7, cyclic nucleotide gated channel 7, CNGC7, cyclic nucleotide gated channel 7 -0.128 0.089
40 267347_at AT2G39950 unknown -0.127 -0.041
41 258910_at AT3G06480 [DEAD box RNA helicase family protein] -0.127 -0.042
42 250321_at AT5G12850 [CCCH-type zinc finger protein with ARM repeat domain] -0.126 -0.083
43 253707_at AT4G29200 [Beta-galactosidase related protein] -0.125 0.061
44 254879_at AT4G11670 unknown -0.120 0.087
45 267260_at AT2G23130 AGP17, arabinogalactan protein 17, ATAGP17 -0.120 -0.056
46 256394_at AT3G06290 AtSAC3B, SAC3B, yeast Sac3 homolog B -0.119 -0.133
47 262728_at AT1G75820 ATCLV1, CLV1, CLAVATA 1, FAS3, FASCIATA 3, FLO5, FLOWER DEVELOPMENT 5 -0.119 -0.290
48 258392_at AT3G15400 ATA20, anther 20 -0.117 -0.003
49 262492_at AT1G21630 [Calcium-binding EF hand family protein] -0.116 -0.043
50 261800_at AT1G30490 ATHB9, PHV, PHAVOLUTA -0.116 0.003
51 246897_at AT5G25560 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.115 -0.047
52 261945_at AT1G64530 NLP6, NIN-like protein 6 -0.113 -0.039
53 261584_at AT1G01040 ASU1, ABNORMAL SUSPENSOR 1, ATDCL1, DICER-LIKE 1, CAF, CARPEL FACTORY, DCL1, dicer-like 1, EMB60, EMBRYO DEFECTIVE 60, EMB76, EMBRYO DEFECTIVE 76, SIN1, SHORT INTEGUMENTS 1, SUS1, SUSPENSOR 1 -0.113 0.125
54 253762_at AT4G28830 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.110 -0.084
55 256832_at AT3G22880 ARLIM15, ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15, ATDMC1, ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1, DMC1, DISRUPTION OF MEIOTIC CONTROL 1 -0.110 0.164