4.0:Information of module
upf2i
In comparison with GR-REV 120min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009414 response to water deprivation BP 4.359e-04
GO:0009415 response to water BP 5.580e-04
GO:2000652 regulation of secondary cell wall biogen... BP 1.896e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009746 response to hexose BP 5.904e-03
GO:0009628 response to abiotic stimulus BP 6.327e-03
GO:0034284 response to monosaccharide BP 6.748e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
upf2i		 Log2 signal ratio
GR-REV 120min
1 248918_at AT5G45890 AtSAG12, SAG12, senescence-associated gene 12 1.031 0.041
2 257264_at AT3G22060 [Receptor-like protein kinase-related family protein] 0.322 0.040
3 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 0.284 -0.025
4 257399_at AT1G23690 unknown 0.218 -0.047
5 250443_at AT5G10520 RBK1, ROP binding protein kinases 1 0.198 -0.021
6 249614_at AT5G37300 WSD1 0.188 0.111
7 267569_at AT2G30790 PSBP-2, photosystem II subunit P-2 0.171 -0.004
8 256083_at AT1G20735 [F-box and associated interaction domains-containing protein] 0.166 -0.010
9 251604_at AT3G57820 [pseudogene] 0.157 0.000
10 245709_at AT5G04320 [Shugoshin C terminus] 0.157 0.033
11 262669_at AT1G62850 [Class I peptide chain release factor] 0.155 0.047
12 266439_s_at AT2G43200 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.151 -0.107
13 260522_x_at AT2G41730 unknown 0.149 0.060
14 244949_at ATMG00150 ORF116 0.146 0.008
15 251650_at AT3G57360 unknown 0.143 0.118
16 255023_at AT4G09850 unknown 0.139 0.006
17 265767_at AT2G48110 MED33B, REF4, REDUCED EPIDERMAL FLUORESCENCE 4 0.130 -0.026
18 250825_at AT5G05210 [Surfeit locus protein 6] 0.121 -0.030
19 260048_at AT1G73750 [Uncharacterised conserved protein UCP031088, alpha/beta hydrolase] 0.121 -0.006
20 252541_at AT3G45750 [Nucleotidyltransferase family protein] 0.114 -0.002
21 255353_at AT4G03870 [Mutator-like transposase family, has a 1.1e-61 P-value blast match to O81510 /24-166 Pfam PF03108 MuDR family transposase (MuDr-element domain)] 0.114 0.028
22 248065_at AT5G55580 [Mitochondrial transcription termination factor family protein] 0.111 0.005
23 256840_x_at AT3G32000 [gypsy-like retrotransposon family (Athila), has a 5.4e-305 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.110 -0.033
24 258687_at AT3G07860 [Ubiquitin-like superfamily protein] 0.108 0.063
25 250566_at AT5G08070 TCP17, TCP domain protein 17 0.105 -0.009
26 267345_at AT2G44240 unknown -0.573 -0.033
27 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] -0.358 -0.207
28 263851_at AT2G04460 unknown -0.357 -0.172
29 255828_at AT2G40630 [Uncharacterised conserved protein (UCP030365)] -0.235 -0.050
30 253244_at AT4G34580 AtSFH1, COW1, CAN OF WORMS1, SRH1, SHORT ROOT HAIR 1 -0.226 -0.145
31 265549_at AT2G07520 unknown -0.225 -0.036
32 248114_at AT5G55370 [MBOAT (membrane bound O-acyl transferase) family protein] -0.210 -0.046
33 249350_at AT5G40360 AtMYB115, myb domain protein 115, MYB115, myb domain protein 115 -0.209 -0.027
34 265048_at AT1G52050 [Mannose-binding lectin superfamily protein] -0.183 0.054
35 265888_at AT2G01735 RIE1, RING-finger protein for embryogenesis -0.180 -0.054
36 266711_at AT2G46740 AtGulLO5, GulLO5, L -gulono-1,4-lactone ( L -GulL) oxidase 5 -0.173 -0.288
37 267594_at AT2G33000 [ubiquitin-associated (UBA)/TS-N domain-containing protein-related] -0.160 -0.029
38 252773_at AT3G42910 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT2G07240.1)] -0.156 -0.013
39 264645_at AT1G08940 [Phosphoglycerate mutase family protein] -0.154 -0.045
40 267560_at AT2G45580 CYP76C3, cytochrome P450, family 76, subfamily C, polypeptide 3 -0.152 -0.040
41 250288_at AT5G13350 [Auxin-responsive GH3 family protein] -0.150 -0.027
42 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor -0.150 -0.017
43 264527_at AT1G30760 [FAD-binding Berberine family protein] -0.148 0.000
44 261640_at AT1G49960 [Xanthine/uracil permease family protein] -0.147 -0.083
45 248750_at AT5G47530 [Auxin-responsive family protein] -0.146 -0.116
46 249676_at AT5G35960 [Protein kinase family protein] -0.145 0.079
47 263718_at AT2G13570 NF-YB7, nuclear factor Y, subunit B7 -0.143 -0.029
48 258241_at AT3G27650 LBD25, LOB domain-containing protein 25 -0.140 0.004
49 247843_at AT5G58050 GDPDL6, Glycerophosphodiester phosphodiesterase (GDPD) like 6, SVL4, SHV3-like 4 -0.134 -0.051