4.0:Information of module
gpa1-4/agb1-2 clean-air 2d
In comparison with sfr3 cold help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010044 response to aluminum ion BP 7.111e-03
GO:0031122 cytoplasmic microtubule organization BP 7.111e-03
GO:0007000 nucleolus organization BP 8.617e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009787 regulation of abscisic acid-activated si... BP 4.919e-04
GO:1901419 regulation of response to alcohol BP 6.570e-04
GO:0009788 negative regulation of abscisic acid-act... BP 2.667e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
gpa1-4/agb1-2 clean-air 2d		 Log2 signal ratio
sfr3 cold
1 259352_at AT3G05170 [Phosphoglycerate mutase family protein] 0.488 0.036
2 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 0.301 0.036
3 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] 0.296 -0.020
4 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.253 0.263
5 262118_at AT1G02850 BGLU11, beta glucosidase 11 0.206 0.131
6 248981_at AT5G45110 ATNPR3, NPR3, NPR1-like protein 3 0.150 0.003
7 262560_at AT1G34280 unknown 0.149 0.318
8 265658_at AT2G13810 ALD1, AGD2-like defense response protein 1, AtALD1, EDTS5, eds two suppressor 5 0.113 -0.041
9 260177_at AT1G70650 [Ran BP2/NZF zinc finger-like superfamily protein] 0.107 -0.006
10 266338_at AT2G32400 ATGLR3.7, GLR3.7, GLUTAMATE RECEPTOR 3.7, GLR5, glutamate receptor 5 0.106 -0.026
11 246136_at AT5G28470 [Major facilitator superfamily protein] 0.104 0.014
12 250169_at AT5G15340 [Pentatricopeptide repeat (PPR) superfamily protein] 0.102 -0.062
13 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 0.101 0.010
14 257971_at AT3G27530 GC6, golgin candidate 6, MAG4, MAIGO 4 0.099 0.038
15 248945_at AT5G45510 [Leucine-rich repeat (LRR) family protein] 0.099 0.028
16 257958_at AT3G25510 [disease resistance protein (TIR-NBS-LRR class), putative] 0.096 -0.001
17 246773_at AT5G27510 [Protein kinase superfamily protein] 0.095 -0.067
18 259007_at AT3G09370 AtMYB3R3, myb domain protein 3R3, MYB3R-3, myb domain protein 3r-3 0.092 0.005
19 248505_at AT5G50360 unknown 0.092 0.004
20 249397_at AT5G40230 UMAMIT37, Usually multiple acids move in and out Transporters 37 0.091 0.047
21 262507_at AT1G11330 [S-locus lectin protein kinase family protein] 0.089 0.056
22 262347_at AT1G64110 DAA1, DUO1-activated ATPase 1 0.089 -0.007
23 256095_at AT1G13630 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.089 0.026
24 250240_at AT5G13590 unknown 0.088 0.003
25 255287_at AT4G04660 [pseudogene] 0.086 -0.002
26 258358_at AT3G14380 [Uncharacterised protein family (UPF0497)] 0.086 -0.047
27 260032_at AT1G68750 ATPPC4, phosphoenolpyruvate carboxylase 4, PPC4, phosphoenolpyruvate carboxylase 4 0.086 -0.012
28 260464_at AT1G10920 LOV1, LOCUS ORCHESTRATING VICTORIN EFFECTS1 0.085 -0.038
29 267226_at AT2G44010 unknown 0.084 0.034
30 254852_at AT4G12020 ATWRKY19, MAPKKK11, MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 11, MEKK4, MAPK/ERK KINASE KINASE 4, WRKY19 0.083 0.030
31 260134_at AT1G66370 AtMYB113, myb domain protein 113, MYB113, myb domain protein 113 0.083 -0.019
32 249487_at AT5G39040 ABCB27, ATP-binding cassette B27, ALS1, ALUMINUM SENSITIVE 1, AtALS1, ATTAP2, ARABIDOPSIS THALIANA TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 2, TAP2, transporter associated with antigen processing protein 2 0.083 0.005
33 248072_at AT5G55680 [glycine-rich protein] 0.083 -0.049
34 267499_at AT2G45500 [AAA-type ATPase family protein] 0.082 -0.004
35 259973_at AT1G76630 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.082 0.021
36 254599_at AT4G19000 ATIWS2, ARABIDOPSIS THALIANA IWS2 (FROM YEAST INTERACTS WITH SPT6), IWS2 0.082 -0.009
37 257245_at AT3G24110 [Calcium-binding EF-hand family protein] 0.082 -0.052
38 264331_at AT1G04130 AtTPR2, TPR2, tetratricopeptide repeat 2 0.082 -0.014
39 261278_at AT1G05800 DGL, DONGLE 0.080 -0.022
40 250326_at AT5G12080 ATMSL10, MSL10, mechanosensitive channel of small conductance-like 10 0.080 -0.010
41 250060_at AT5G17690 AtLHP1, LHP1, LIKE HETEROCHROMATIN PROTEIN 1, TFL2, TERMINAL FLOWER 2 0.080 0.032
42 248615_at AT5G49570 AtPNG1, peptide-N-glycanase 1, PNG1, peptide-N-glycanase 1 0.079 0.022
43 263040_at AT1G23300 [MATE efflux family protein] 0.079 -0.032
44 260189_at AT1G67550 URE, urease 0.079 0.033
45 265047_at AT1G51960 IQD27, IQ-domain 27 0.079 -0.014
46 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.078 0.121
47 256768_at AT3G13682 LDL2, LSD1-like2 0.078 -0.021
48 265502_at AT2G15500 [RNA-binding protein] 0.078 -0.022
49 249784_at AT5G24280 GMI1, GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 0.077 0.003
50 260291_at AT1G63700 EMB71, EMBRYO DEFECTIVE 71, MAPKKK4, MAP KINASE KINASE KINASE 4, YDA, YODA 0.076 -0.026
51 259992_at AT1G67970 AT-HSFA8, HSFA8, heat shock transcription factor A8 0.076 0.036
52 250154_at AT5G15140 [Galactose mutarotase-like superfamily protein] 0.075 -0.029
53 267375_at AT2G26300 ATGPA1, ARABIDOPSIS THALIANA G PROTEIN ALPHA SUBUNIT 1, GP ALPHA 1, G protein alpha subunit 1, GPA1, G PROTEIN ALPHA SUBUNIT 1 -0.836 0.103
54 253204_at AT4G34460 AGB1, GTP binding protein beta 1, ATAGB1, ELK4, ERECTA-LIKE 4 -0.464 -0.011
55 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.316 -0.024
56 267545_at AT2G32690 ATGRP23, GLYCINE-RICH PROTEIN 23, GRP23, glycine-rich protein 23 -0.276 0.059
57 247469_at AT5G62165 AGL42, AGAMOUS-like 42, FYF, FOREVER YOUNG FLOWER -0.262 -0.020
58 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 -0.232 0.133
59 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.229 -0.054
60 250045_at AT5G17700 [MATE efflux family protein] -0.218 0.024
61 244998_at ATCG00180 RPOC1 -0.183 0.006
62 245008_at ATCG00360 YCF3 -0.163 -0.024
63 245049_at ATCG00050 RPS16, ribosomal protein S16 -0.145 -0.049
64 249046_at AT5G44400 [FAD-binding Berberine family protein] -0.144 -0.046
65 257679_at AT3G20470 ATGRP-5, ATGRP5, GRP-5, GLYCINE-RICH PROTEIN 5, GRP5, glycine-rich protein 5 -0.140 -0.006
66 255607_at AT4G01130 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.136 -0.056
67 244966_at ATCG00600 PETG -0.131 -0.043
68 260664_at AT1G19510 ATRL5, RAD-like 5, RL5, RAD-like 5, RSM4, RADIALIS-LIKE SANT/MYB 4 -0.128 -0.024
69 257793_at AT3G26960 [Pollen Ole e 1 allergen and extensin family protein] -0.124 -0.054
70 266516_at AT2G47880 [Glutaredoxin family protein] -0.121 -0.067
71 266325_at AT2G46630 unknown -0.118 -0.002
72 258604_at AT3G02980 MCC1, MEIOTIC CONTROL OF CROSSOVERS1 -0.117 -0.008
73 245637_at AT1G25230 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.115 0.011
74 266560_at AT2G23950 [Leucine-rich repeat protein kinase family protein] -0.110 -0.080
75 267195_at AT2G30940 [Protein kinase superfamily protein] -0.109 -0.012
76 250031_at AT5G18240 ATMYR1, ARABIDOPSIS MYB-RELATED PROTEIN 1, MYR1, myb-related protein 1 -0.109 -0.100
77 244965_at ATCG00590 ORF31 -0.107 -0.029
78 254132_at AT4G24660 ATHB22, HOMEOBOX PROTEIN 22, HB22, homeobox protein 22, MEE68, MATERNAL EFFECT EMBRYO ARREST 68, ZHD2, ZINC FINGER HOMEODOMAIN 2 -0.106 -0.047
79 266950_at AT2G18910 [hydroxyproline-rich glycoprotein family protein] -0.106 0.017
80 246370_at AT1G51920 unknown -0.102 -0.038
81 261586_at AT1G01640 [BTB/POZ domain-containing protein] -0.101 0.052
82 266943_at AT2G18820 [non-LTR retrotransposon family (LINE), has a 2.7e-38 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)] -0.101 -0.006
83 244982_at ATCG00780 RPL14, ribosomal protein L14 -0.097 -0.037
84 249167_at AT5G42860 unknown -0.094 0.006
85 264725_at AT1G22885 unknown -0.094 -0.034
86 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] -0.093 0.007
87 256720_at AT2G34140 [Dof-type zinc finger DNA-binding family protein] -0.092 -0.034
88 262444_at AT1G47480 [alpha/beta-Hydrolases superfamily protein] -0.092 0.013
89 248923_at AT5G45940 AtNUDT11, Arabidopsis thaliana nudix hydrolase homolog 11, AtNUDX11, Arabidopsis thaliana nudix hydrolase homolog 11, NUDT11, nudix hydrolase homolog 11, NUDX11, nudix hydrolase homolog 11 -0.091 -0.015
90 260335_at AT1G74000 SS3, strictosidine synthase 3 -0.091 0.020
91 259978_at AT1G76540 CDKB2;1, cyclin-dependent kinase B2;1 -0.088 -0.005
92 260887_at AT1G29160 [Dof-type zinc finger DNA-binding family protein] -0.087 -0.001
93 245017_at ATCG00510 PSAI, photsystem I subunit I -0.087 -0.027
94 264573_at AT1G05310 [Pectin lyase-like superfamily protein] -0.085 0.036
95 265311_at AT2G20250 unknown -0.085 -0.069
96 248862_at AT5G46730 [glycine-rich protein] -0.085 -0.076
97 260640_at AT1G53350 [Disease resistance protein (CC-NBS-LRR class) family] -0.084 -0.019
98 248172_at AT5G54660 [HSP20-like chaperones superfamily protein] -0.083 -0.001
99 262510_at AT1G11270 [F-box and associated interaction domains-containing protein] -0.082 0.020
100 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] -0.081 -0.023
101 257724_at AT3G18510 unknown -0.079 -0.044
102 256673_at AT3G52370 FLA15, FASCICLIN-like arabinogalactan protein 15 precursor -0.078 -0.055
103 258017_at AT3G19370 unknown -0.076 -0.144