4.0:Information of module
hai1-2
In comparison with whole roots 140 mM NaCl 4 hour help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009860 pollen tube growth BP 4.613e-03
GO:0042254 ribosome biogenesis BP 6.500e-03
GO:0022613 ribonucleoprotein complex biogenesis BP 7.082e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010029 regulation of seed germination BP 1.715e-02
GO:1900140 regulation of seedling development BP 1.838e-02
GO:0009697 salicylic acid biosynthetic process BP 3.130e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
hai1-2		 Log2 signal ratio
whole roots 140 mM NaCl 4 hour
1 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.252 -0.079
2 263497_at AT2G42540 COR15, COR15A, cold-regulated 15a 0.187 0.957
3 254743_at AT4G13420 ATHAK5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, HAK5, high affinity K+ transporter 5 0.178 0.393
4 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 0.167 0.103
5 260353_at AT1G69230 SP1L2, SPIRAL1-like2 0.166 0.214
6 252123_at AT3G51240 F3'H, F3H, flavanone 3-hydroxylase, TT6, TRANSPARENT TESTA 6 0.150 0.048
7 251229_at AT3G62740 BGLU7, beta glucosidase 7 0.143 0.181
8 253494_at AT4G31830 unknown 0.137 0.637
9 245982_at AT5G13170 AtSWEET15, SAG29, senescence-associated gene 29, SWEET15 0.135 0.716
10 264940_at AT1G60470 AtGolS4, galactinol synthase 4, GolS4, galactinol synthase 4 0.133 0.707
11 262585_at AT1G15460 ATBOR4, ARABIDOPSIS THALIANA REQUIRES HIGH BORON 4, BOR4, REQUIRES HIGH BORON 4 0.132 0.303
12 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.128 -0.069
13 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 0.124 -0.230
14 255591_at AT4G01630 ATEXP17, EXPANSIN 17, ATEXPA17, expansin A17, ATHEXP ALPHA 1.13, EXPA17, expansin A17 0.123 0.201
15 256781_at AT3G13650 [Disease resistance-responsive (dirigent-like protein) family protein] 0.120 -0.016
16 256449_at AT1G33460 [Mutator-like transposase family, has a 3.6e-40 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] 0.120 -0.011
17 248227_at AT5G53820 [Late embryogenesis abundant protein (LEA) family protein] 0.118 0.036
18 257525_at AT3G04900 [Heavy metal transport/detoxification superfamily protein ] 0.116 0.094
19 265216_at AT1G05100 MAPKKK18, mitogen-activated protein kinase kinase kinase 18 0.115 0.452
20 264469_at AT1G67100 LBD40, LOB domain-containing protein 40 0.115 -0.004
21 266443_at AT2G43270 [F-box and associated interaction domains-containing protein] 0.114 0.005
22 255944_at AT5G28600 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G35770.1)] 0.113 0.060
23 262807_at AT1G11740 [ankyrin repeat family protein] 0.113 0.084
24 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.112 0.138
25 250142_at AT5G14650 [Pectin lyase-like superfamily protein] 0.112 -0.029
26 251613_at AT3G57960 [Emsy N Terminus (ENT) domain-containing protein] 0.112 -0.027
27 251689_at AT3G56500 [serine-rich protein-related] 0.109 -0.046
28 248494_at AT5G50770 AtHSD6, hydroxysteroid dehydrogenase 6, HSD6, hydroxysteroid dehydrogenase 6 0.109 -0.019
29 249687_at AT5G36150 ATPEN3, putative pentacyclic triterpene synthase 3, PEN3, putative pentacyclic triterpene synthase 3 0.108 0.020
30 250632_at AT5G07450 CYCP4;3, cyclin p4;3 0.106 -0.017
31 263889_at AT2G37010 ATNAP12, non-intrinsic ABC protein 12, NAP12, non-intrinsic ABC protein 12 0.105 0.020
32 260424_at AT1G72460 [Leucine-rich repeat protein kinase family protein] 0.105 0.021
33 249761_at AT5G23970 [HXXXD-type acyl-transferase family protein] 0.104 0.063
34 265992_at AT2G24130 [Leucine-rich receptor-like protein kinase family protein] 0.104 0.097
35 260762_at AT1G49015 [DPP6 N-terminal domain-like protein] 0.103 0.041
36 257536_at AT3G02800 AtPFA-DSP3, PFA-DSP3, plant and fungi atypical dual-specificity phosphatase 3 0.102 0.010
37 258854_at AT3G02100 [UDP-Glycosyltransferase superfamily protein] 0.102 0.024
38 253906_at AT4G27220 [NB-ARC domain-containing disease resistance protein] 0.101 -0.036
39 255921_at AT1G22240 APUM8, pumilio 8, PUM8, pumilio 8 0.101 -0.023
40 245225_at AT3G29800 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.101 0.001
41 253774_at AT4G28530 anac074, NAC domain containing protein 74, NAC074, NAC domain containing protein 74 0.099 0.204
42 250805_at AT5G05050 [Cysteine proteinases superfamily protein] 0.099 0.042
43 250799_at AT5G05350 [PLAC8 family protein] 0.099 0.049
44 263208_at AT1G10480 ZFP5, zinc finger protein 5 0.098 0.189
45 254240_at AT4G23496 SP1L5, SPIRAL1-like5 0.098 -0.048
46 260122_at AT1G33900 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.097 0.048
47 251101_at AT5G01680 ATCHX26, ARABIDOPSIS THALIANA CATION/HYDROGEN EXCHANGER 26, CHX26, cation/H+ exchanger 26 0.097 0.001
48 245622_at AT4G14080 MEE48, maternal effect embryo arrest 48 0.097 0.019
49 248214_at AT5G53670 unknown 0.097 0.022
50 255976_at AT1G22010 unknown 0.096 0.051
51 245170_at AT2G47570 [Ribosomal protein L18e/L15 superfamily protein] 0.095 -0.010
52 256371_at AT1G66770 AtSWEET6, SWEET6 0.095 0.035
53 267574_at AT2G30680 unknown 0.095 0.023
54 259991_at AT1G68040 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.094 0.028
55 255320_at AT4G04230 [gypsy-like retrotransposon family, has a 1.3e-95 P-value blast match to T27D20 reverse transcriptase (from Dan Voytas http://www.public.iastate.edu/~voytas) (Gypsy_Ty3-family)] 0.094 0.068
56 252753_at AT3G43500 unknown 0.094 0.014
57 262812_at AT1G11690 unknown 0.094 0.062
58 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.093 0.181
59 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 -0.376 -0.216
60 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.289 0.034
61 249675_at AT5G35940 [Mannose-binding lectin superfamily protein] -0.256 -0.121
62 256131_at AT1G13600 AtbZIP58, basic leucine-zipper 58, bZIP58, basic leucine-zipper 58 -0.227 0.391
63 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 -0.227 0.022
64 254818_at AT4G12470 AZI1, azelaic acid induced 1 -0.153 -0.105
65 252629_at AT3G44970 [Cytochrome P450 superfamily protein] -0.151 0.031
66 257551_at AT3G13270 unknown -0.138 0.067
67 265908_at AT4G00270 [DNA-binding storekeeper protein-related transcriptional regulator] -0.137 0.009
68 246951_at AT5G04880 [expressed protein] -0.129 0.029
69 263569_at AT2G27170 SMC3, STRUCTURAL MAINTENANCE OF CHROMOSOMES 3, TTN7, TITAN7 -0.127 0.039
70 248315_at AT5G52630 MEF1, mitochondrial RNA editing factor 1 -0.126 0.033
71 266794_at AT2G02980 OTP85, ORGANELLE TRANSCRIPT PROCESSING 85 -0.122 -0.065
72 267485_at AT2G02820 AtMYB88, myb domain protein 88, MYB88, myb domain protein 88 -0.121 -0.002
73 251987_at AT3G53280 CYP71B5, cytochrome p450 71b5 -0.119 -0.261
74 266529_at AT2G16880 [Pentatricopeptide repeat (PPR) superfamily protein] -0.119 -0.067
75 258011_at AT3G19510 HAT3.1 -0.118 0.033
76 256487_at AT1G31540 [Disease resistance protein (TIR-NBS-LRR class) family] -0.115 -0.037
77 257678_at AT3G20420 ATRTL2, RNASEIII-LIKE 2, RTL2, RNAse THREE-like protein 2 -0.109 -0.049
78 266836_at AT2G26000 BRIZ2, BRAP2 RING ZnF UBP domain-containing protein 2 -0.108 0.096
79 246765_at AT5G27330 [Prefoldin chaperone subunit family protein] -0.106 -0.009
80 249868_at AT5G23030 TET12, tetraspanin12 -0.106 -0.106
81 260505_at AT1G47230 CYCA3;4, CYCLIN A3;4 -0.105 0.020
82 245156_at AT5G12480 CPK7, calmodulin-domain protein kinase 7 -0.097 0.081
83 264083_at AT2G31230 ATERF15, ethylene-responsive element binding factor 15, ERF15, ethylene-responsive element binding factor 15 -0.096 -0.051
84 264167_at AT1G02060 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.095 -0.026
85 264049_at AT2G22390 ATRABA4E, RABA4E, RAB GTPase homolog A4E -0.094 0.017
86 256323_at AT1G54920 unknown -0.091 -0.148
87 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 -0.088 -0.017
88 257851_at AT3G12940 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.087 -0.031
89 249277_at AT5G41890 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.086 0.007
90 258389_at AT3G15390 SDE5, silencing defective 5 -0.085 -0.131
91 245826_at AT1G57850 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.084 -0.033
92 252216_at AT3G50420 [Pentatricopeptide repeat (PPR) superfamily protein] -0.084 -0.005
93 265993_at AT2G24160 [pseudogene] -0.083 0.059
94 257622_at AT3G20280 [RING/FYVE/PHD zinc finger superfamily protein] -0.082 -0.030
95 245604_at AT4G14290 [alpha/beta-Hydrolases superfamily protein] -0.082 -0.140
96 246828_at AT5G26350 unknown -0.081 0.059
97 259901_at AT1G74180 AtRLP14, receptor like protein 14, RLP14, receptor like protein 14 -0.079 -0.079
98 258560_at AT3G06020 FAF4, FANTASTIC FOUR 4 -0.078 -0.062
99 257374_at AT2G43280 [Far-red impaired responsive (FAR1) family protein] -0.077 0.000
100 265127_at AT1G55560 sks14, SKU5 similar 14 -0.077 0.072
101 256976_at AT3G21020 [copia-like retrotransposon family, has a 5.4e-14 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] -0.076 -0.006
102 258887_at AT3G05630 PDLZ2, PHOSPHOLIPASE D ZETA 2, PLDP2, phospholipase D P2, PLDZETA2, PHOSPHOLIPASE D ZETA 2 -0.074 0.298
103 256970_at AT3G21090 ABCG15, ATP-binding cassette G15 -0.074 0.083
104 246212_at AT4G36930 SPT, SPATULA -0.074 -0.021
105 260476_at AT1G11060 [WAPL (Wings apart-like protein regulation of heterochromatin) protein] -0.074 -0.029
106 251980_at AT3G53270 [Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein] -0.073 0.044
107 245314_at AT4G16745 [Exostosin family protein] -0.073 0.017
108 248847_at AT5G46510 VICTL, VARIATION IN COMPOUND TRIGGERED ROOT growth response-like -0.072 -0.063
109 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 -0.072 0.376
110 257935_at AT3G25440 [RNA-binding CRS1 / YhbY (CRM) domain protein] -0.071 -0.016
111 260843_at AT1G29060 [Target SNARE coiled-coil domain protein] -0.071 -0.048
112 247004_at AT5G67570 DG1, DELAYED GREENING 1, EMB1408, embryo defective 1408, EMB246, EMBRYO DEFECTIVE 246 -0.070 -0.070
113 255812_at AT4G10310 ATHKT1, HKT1, high-affinity K+ transporter 1, HKT1;1 -0.069 -0.106
114 256054_at AT1G07120 unknown -0.069 0.066
115 252228_at AT3G49920 ATVDAC5, ARABIDOPSIS THALIANA VOLTAGE DEPENDENT ANION CHANNEL 5, VDAC5, voltage dependent anion channel 5 -0.068 0.019