4.0:Information of module
12h volatiles Sm. R3089
In comparison with root stele -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016310 phosphorylation BP 6.407e-05
GO:0006468 protein phosphorylation BP 1.731e-04
GO:0006464 cellular protein modification process BP 2.376e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009416 response to light stimulus BP 1.658e-05
GO:0009314 response to radiation BP 1.887e-05
GO:0009642 response to light intensity BP 2.464e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
12h volatiles Sm. R3089		 Log2 signal ratio
root stele -S
1 247406_at AT5G62920 ARR6, response regulator 6 0.255 0.077
2 266424_at AT2G41330 [Glutaredoxin family protein] 0.237 0.035
3 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 0.226 0.377
4 250860_at AT5G04770 ATCAT6, ARABIDOPSIS THALIANA CATIONIC AMINO ACID TRANSPORTER 6, CAT6, cationic amino acid transporter 6 0.185 -0.020
5 257288_at AT3G29670 PMAT2, phenolic glucoside malonyltransferase 2 0.168 0.006
6 252573_at AT3G45260 [C2H2-like zinc finger protein] 0.143 -0.107
7 250690_at AT5G06530 ABCG22, ATP-binding cassette G22, AtABCG22, Arabidopsis thaliana ATP-binding cassette G22 0.141 -0.096
8 249409_at AT5G40340 [Tudor/PWWP/MBT superfamily protein] 0.125 0.070
9 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.125 0.108
10 259858_at AT1G68400 [leucine-rich repeat transmembrane protein kinase family protein] 0.110 0.174
11 266873_at AT2G44740 CYCP4;1, cyclin p4;1 0.106 0.060
12 251601_at AT3G57800 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.102 -0.001
13 260939_at AT1G45180 [RING/U-box superfamily protein] 0.102 0.044
14 262213_at AT1G74870 [RING/U-box superfamily protein] 0.102 0.046
15 251584_at AT3G58620 TTL4, tetratricopetide-repeat thioredoxin-like 4 0.091 -0.068
16 251539_at AT3G58690 [Protein kinase superfamily protein] 0.090 0.246
17 257853_at AT3G12960 SMP1, seed maturation protein 1 0.089 0.025
18 264857_at AT1G24170 GATL8, GALACTURONOSYLTRANSFERASE-LIKE 8, LGT9 0.088 -0.162
19 260109_at AT1G63260 TET10, tetraspanin10 0.088 0.182
20 254529_at AT4G19540 INDH, iron-sulfur protein required for NADH dehydrogenase, INDL, IND1(iron-sulfur protein required for NADH dehydrogenase)-like 0.086 0.060
21 245830_at AT1G57790 [F-box family protein] 0.085 0.073
22 255411_at AT4G03110 AtBRN1, AtRBP-DR1, RNA-binding protein-defense related 1, BRN1, Bruno-like 1, RBP-DR1, RNA-binding protein-defense related 1 0.083 -0.003
23 261791_at AT1G16170 unknown 0.083 -0.154
24 261663_at AT1G18330 EPR1, EARLY-PHYTOCHROME-RESPONSIVE1, RVE7, REVEILLE 7 -0.300 -0.083
25 252661_at AT3G44450 unknown -0.267 -0.250
26 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.223 0.768
27 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] -0.222 -0.067
28 267472_at AT2G02850 ARPN, plantacyanin -0.200 0.022
29 257421_at AT1G12030 unknown -0.192 0.284
30 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.192 0.434
31 265892_at AT2G15020 unknown -0.176 0.239
32 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.167 -0.301
33 245758_at AT1G32240 KAN2, KANADI 2 -0.133 0.051
34 251725_at AT3G56260 unknown -0.121 -0.017
35 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.112 0.270
36 264479_at AT1G77280 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] -0.104 -0.018
37 252888_at AT4G39210 APL3 -0.103 0.341
38 250566_at AT5G08070 TCP17, TCP domain protein 17 -0.102 -0.027
39 262307_at AT1G71000 [Chaperone DnaJ-domain superfamily protein] -0.099 -0.137
40 252227_at AT3G49900 [Phototropic-responsive NPH3 family protein] -0.098 -0.045
41 263433_at AT2G22240 ATIPS2, INOSITOL 3-PHOSPHATE SYNTHASE 2, ATMIPS2, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2, MIPS2, myo-inositol-1-phosphate synthase 2 -0.097 -0.197
42 244982_at ATCG00780 RPL14, ribosomal protein L14 -0.096 0.174
43 251299_at AT3G61950 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.089 0.086
44 248467_at AT5G50800 AtSWEET13, SWEET13 -0.088 -0.464
45 264697_at AT1G70210 ATCYCD1;1, CYCD1;1, CYCLIN D1;1 -0.086 0.065