4.0:Information of module
12h volatiles Sm. R3089
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016310 phosphorylation BP 6.407e-05
GO:0006468 protein phosphorylation BP 1.731e-04
GO:0006464 cellular protein modification process BP 2.376e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009416 response to light stimulus BP 1.658e-05
GO:0009314 response to radiation BP 1.887e-05
GO:0009642 response to light intensity BP 2.464e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
12h volatiles Sm. R3089		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 247406_at AT5G62920 ARR6, response regulator 6 0.255 -0.966
2 266424_at AT2G41330 [Glutaredoxin family protein] 0.237 -0.793
3 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 0.226 0.048
4 250860_at AT5G04770 ATCAT6, ARABIDOPSIS THALIANA CATIONIC AMINO ACID TRANSPORTER 6, CAT6, cationic amino acid transporter 6 0.185 -0.109
5 257288_at AT3G29670 PMAT2, phenolic glucoside malonyltransferase 2 0.168 -1.321
6 252573_at AT3G45260 [C2H2-like zinc finger protein] 0.143 -0.196
7 250690_at AT5G06530 ABCG22, ATP-binding cassette G22, AtABCG22, Arabidopsis thaliana ATP-binding cassette G22 0.141 -0.659
8 249409_at AT5G40340 [Tudor/PWWP/MBT superfamily protein] 0.125 0.173
9 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.125 0.308
10 259858_at AT1G68400 [leucine-rich repeat transmembrane protein kinase family protein] 0.110 -0.057
11 266873_at AT2G44740 CYCP4;1, cyclin p4;1 0.106 -0.036
12 251601_at AT3G57800 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.102 0.247
13 260939_at AT1G45180 [RING/U-box superfamily protein] 0.102 0.641
14 262213_at AT1G74870 [RING/U-box superfamily protein] 0.102 -0.752
15 251584_at AT3G58620 TTL4, tetratricopetide-repeat thioredoxin-like 4 0.091 0.283
16 251539_at AT3G58690 [Protein kinase superfamily protein] 0.090 -0.269
17 257853_at AT3G12960 SMP1, seed maturation protein 1 0.089 -0.467
18 264857_at AT1G24170 GATL8, GALACTURONOSYLTRANSFERASE-LIKE 8, LGT9 0.088 0.215
19 260109_at AT1G63260 TET10, tetraspanin10 0.088 0.919
20 254529_at AT4G19540 INDH, iron-sulfur protein required for NADH dehydrogenase, INDL, IND1(iron-sulfur protein required for NADH dehydrogenase)-like 0.086 -0.269
21 245830_at AT1G57790 [F-box family protein] 0.085 -0.434
22 255411_at AT4G03110 AtBRN1, AtRBP-DR1, RNA-binding protein-defense related 1, BRN1, Bruno-like 1, RBP-DR1, RNA-binding protein-defense related 1 0.083 1.377
23 261791_at AT1G16170 unknown 0.083 -0.119
24 261663_at AT1G18330 EPR1, EARLY-PHYTOCHROME-RESPONSIVE1, RVE7, REVEILLE 7 -0.300 1.046
25 252661_at AT3G44450 unknown -0.267 1.058
26 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.223 -0.562
27 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] -0.222 0.199
28 267472_at AT2G02850 ARPN, plantacyanin -0.200 1.294
29 257421_at AT1G12030 unknown -0.192 -0.161
30 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.192 0.259
31 265892_at AT2G15020 unknown -0.176 0.099
32 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.167 0.875
33 245758_at AT1G32240 KAN2, KANADI 2 -0.133 -0.092
34 251725_at AT3G56260 unknown -0.121 0.292
35 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.112 0.890
36 264479_at AT1G77280 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] -0.104 -0.827
37 252888_at AT4G39210 APL3 -0.103 0.598
38 250566_at AT5G08070 TCP17, TCP domain protein 17 -0.102 0.178
39 262307_at AT1G71000 [Chaperone DnaJ-domain superfamily protein] -0.099 -0.159
40 252227_at AT3G49900 [Phototropic-responsive NPH3 family protein] -0.098 -0.999
41 263433_at AT2G22240 ATIPS2, INOSITOL 3-PHOSPHATE SYNTHASE 2, ATMIPS2, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2, MIPS2, myo-inositol-1-phosphate synthase 2 -0.097 -0.548
42 244982_at ATCG00780 RPL14, ribosomal protein L14 -0.096 0.149
43 251299_at AT3G61950 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.089 -1.053
44 248467_at AT5G50800 AtSWEET13, SWEET13 -0.088 0.089
45 264697_at AT1G70210 ATCYCD1;1, CYCD1;1, CYCLIN D1;1 -0.086 -0.412