4.0:Information of module
low R/FR mock spray
In comparison with ein2 1% sucrose 14-day-old help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 5.305e-21
GO:0009733 response to auxin BP 8.611e-20
GO:0009725 response to hormone BP 1.275e-19
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009891 positive regulation of biosynthetic proc... BP 1.176e-04
GO:0080167 response to karrikin BP 2.593e-04
GO:0009812 flavonoid metabolic process BP 3.509e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
low R/FR mock spray		 Log2 signal ratio
ein2 1% sucrose 14-day-old
1 251245_at AT3G62090 PIF6, PHYTOCHROME-INTERACTING FACTOR 6, PIL2, phytochrome interacting factor 3-like 2 0.965 -0.167
2 248371_at AT5G51810 AT2353, ATGA20OX2, GA20OX2, gibberellin 20 oxidase 2 0.905 -0.063
3 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.885 -0.019
4 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 0.842 0.188
5 253155_at AT4G35720 unknown 0.789 -0.172
6 251012_at AT5G02580 unknown 0.785 -0.090
7 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 0.759 -0.493
8 245696_at AT5G04190 PKS4, phytochrome kinase substrate 4 0.724 -0.535
9 247878_at AT5G57760 unknown 0.715 -0.896
10 250327_at AT5G12050 unknown 0.712 0.004
11 259417_at AT1G02340 FBI1, HFR1, LONG HYPOCOTYL IN FAR-RED, REP1, REDUCED PHYTOCHROME SIGNALING 1, RSF1, REDUCED SENSITIVITY TO FAR-RED LIGHT 1 0.669 0.135
12 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 0.632 -0.598
13 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 0.629 0.398
14 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.595 0.308
15 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 0.578 -0.106
16 255413_at AT4G03140 [NAD(P)-binding Rossmann-fold superfamily protein] 0.564 -0.148
17 259332_at AT3G03830 SAUR28, SMALL AUXIN UP RNA 28 0.562 -0.010
18 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 0.558 0.055
19 253908_at AT4G27260 GH3.5, WES1 0.555 -0.062
20 265806_at AT2G18010 SAUR10, SMALL AUXIN UPREGULATED RNA 10 0.503 0.015
21 251026_at AT5G02200 FHL, far-red-elongated hypocotyl1-like 0.494 0.014
22 248160_at AT5G54470 BBX29, B-box domain protein 29 0.485 0.072
23 249065_at AT5G44260 AtTZF5, TZF5, Tandem CCCH Zinc Finger protein 5 0.482 -0.488
24 254685_at AT4G13790 SAUR25, SMALL AUXIN UPREGULATED RNA 25 0.478 -0.013
25 263653_at AT1G04310 ERS2, ethylene response sensor 2 0.476 -0.590
26 245136_at AT2G45210 SAG201, senescence-associated gene 201, SAUR36, SMALL AUXIN UPREGULATED 36 0.475 -0.036
27 256743_at AT3G29370 P1R3, P1R3 0.466 -0.228
28 259787_at AT1G29460 SAUR65, SMALL AUXIN UPREGULATED RNA 65 0.461 0.162
29 261456_at AT1G21050 unknown 0.443 0.048
30 263981_at AT2G42870 HLH1, HELIX-LOOP-HELIX 1, PAR1, PHY RAPIDLY REGULATED 1 0.437 -0.270
31 246000_at AT5G20820 SAUR76, SMALL AUXIN UPREGULATED RNA 76 0.431 -0.170
32 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 0.426 0.117
33 255723_at AT3G29575 AFP3, ABI five binding protein 3 0.418 0.042
34 261957_at AT1G64660 ATMGL, methionine gamma-lyase, MGL, methionine gamma-lyase 0.417 -0.064
35 261327_at AT1G44830 [Integrase-type DNA-binding superfamily protein] 0.411 -0.382
36 267230_at AT2G44080 ARL, ARGOS-like 0.409 -0.420
37 252129_at AT3G50890 AtHB28, homeobox protein 28, HB28, homeobox protein 28, ZHD7, ZINC FINGER HOMEODOMAIN 7 0.408 0.032
38 265276_at AT2G28400 unknown 0.406 0.066
39 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 0.405 0.109
40 254293_at AT4G23060 IQD22, IQ-domain 22 0.403 -0.161
41 254809_at AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 0.400 0.082
42 245757_at AT1G35140 EXL1, EXORDIUM like 1, PHI-1, PHOSPHATE-INDUCED 1 0.397 -0.117
43 245076_at AT2G23170 GH3.3 0.391 0.178
44 260883_at AT1G29270 unknown 0.387 -0.060
45 266830_at AT2G22810 ACC4, 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID SYNTHASE POLYPEPTIDE, ACS4, 1-aminocyclopropane-1-carboxylate synthase 4, ATACS4 0.386 0.224
46 248564_at AT5G49700 AHL17, AT-hook motif nuclear localized protein 17 0.377 -0.438
47 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.375 0.158
48 253628_at AT4G30280 ATXTH18, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18, XTH18, xyloglucan endotransglucosylase/hydrolase 18 0.372 -0.257
49 261717_at AT1G18400 BEE1, BR enhanced expression 1 0.371 -0.187
50 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.370 -0.010
51 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.363 -0.048
52 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.359 0.051
53 251752_at AT3G55740 ATPROT2, PROLINE TRANSPORTER 2, PROT2, proline transporter 2 0.357 0.110
54 260915_at AT1G02660 [alpha/beta-Hydrolases superfamily protein] 0.354 -0.197
55 246932_at AT5G25190 ESE3, ethylene and salt inducible 3 0.343 -0.275
56 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] 0.338 -0.008
57 246522_at AT5G15830 AtbZIP3, basic leucine-zipper 3, bZIP3, basic leucine-zipper 3 0.336 0.053
58 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase 0.335 -0.278
59 252204_at AT3G50340 unknown 0.333 -0.122
60 245276_at AT4G16780 ATHB-2, homeobox protein 2, ATHB2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, HB-2, homeobox protein 2 0.332 -0.024
61 246034_at AT5G08350 [GRAM domain-containing protein / ABA-responsive protein-related] 0.331 -0.037
62 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.331 0.013
63 261917_at AT1G65920 [Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain] 0.324 -0.030
64 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 0.316 0.143
65 258367_at AT3G14370 WAG2 0.313 -0.189
66 250657_at AT5G07000 ATST2B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2B, ST2B, sulfotransferase 2B 0.312 0.082
67 245439_at AT4G16670 unknown 0.308 -0.070
68 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.306 0.076
69 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.306 -0.006
70 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 0.304 -0.102
71 257650_at AT3G16800 [Protein phosphatase 2C family protein] 0.298 0.078
72 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.295 -0.242
73 248509_at AT5G50335 unknown 0.292 -1.050
74 248253_at AT5G53290 CRF3, cytokinin response factor 3 0.290 -0.039
75 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 0.289 -0.205
76 260070_at AT1G73830 BEE3, BR enhanced expression 3 0.288 -0.642
77 256114_at AT1G16850 unknown 0.287 0.056
78 251870_at AT3G54510 [Early-responsive to dehydration stress protein (ERD4)] 0.281 -0.148
79 256190_at AT1G30100 ATNCED5, NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5, NCED5, nine-cis-epoxycarotenoid dioxygenase 5 0.280 0.061
80 255064_at AT4G08950 EXO, EXORDIUM 0.279 -0.102
81 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.279 0.091
82 267013_at AT2G39180 ATCRR2, CCR2, CRINKLY4 related 2 0.278 -0.183
83 255568_at AT4G01250 AtWRKY22, WRKY22 0.278 -0.104
84 263169_at AT1G03010 [Phototropic-responsive NPH3 family protein] 0.274 -0.045
85 260856_at AT1G21910 DREB26, dehydration response element-binding protein 26 0.271 -0.092
86 246935_at AT5G25350 EBF2, EIN3-binding F box protein 2 0.270 -0.586
87 252988_at AT4G38410 [Dehydrin family protein] 0.268 -0.144
88 258399_at AT3G15540 IAA19, indole-3-acetic acid inducible 19, MSG2, MASSUGU 2 0.266 0.067
89 260560_at AT2G43590 [Chitinase family protein] 0.263 -0.162
90 251010_at AT5G02550 unknown 0.261 -0.119
91 263151_at AT1G54120 unknown 0.261 0.007
92 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.258 0.038
93 262826_at AT1G13080 CYP71B2, cytochrome P450, family 71, subfamily B, polypeptide 2 -0.392 0.109
94 260081_at AT1G78170 unknown -0.382 0.096
95 254572_at AT4G19380 [Long-chain fatty alcohol dehydrogenase family protein] -0.377 0.010
96 254371_at AT4G21760 BGLU47, beta-glucosidase 47 -0.376 0.150
97 247467_at AT5G62130 [Per1-like family protein] -0.356 0.497
98 264240_at AT1G54820 [Protein kinase superfamily protein] -0.321 -0.013
99 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 -0.317 0.283
100 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 -0.308 -0.004
101 261581_at AT1G01140 CIPK9, CBL-interacting protein kinase 9, PKS6, PROTEIN KINASE 6, SnRK3.12, SNF1-RELATED PROTEIN KINASE 3.12 -0.304 -0.092
102 251169_at AT3G63210 MARD1, MEDIATOR OF ABA-REGULATED DORMANCY 1 -0.298 0.043
103 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.295 -0.160
104 261407_at AT1G18810 [phytochrome kinase substrate-related] -0.284 0.330
105 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] -0.272 0.108
106 259977_at AT1G76590 [PLATZ transcription factor family protein] -0.261 0.042
107 250379_at AT5G11590 TINY2, TINY2 -0.260 0.023
108 250255_at AT5G13730 SIG4, sigma factor 4, SIGD -0.251 -0.030
109 262170_at AT1G74940 unknown -0.230 0.023
110 245341_at AT4G16447 unknown -0.225 0.017
111 248917_at AT5G45850 unknown -0.215 0.093
112 251028_at AT5G02230 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.213 0.086
113 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 -0.211 0.061
114 254145_at AT4G24700 unknown -0.210 0.113
115 256096_at AT1G13650 unknown -0.210 0.075
116 252057_at AT3G52480 unknown -0.206 -0.061
117 262811_at AT1G11700 unknown -0.199 0.134
118 248961_at AT5G45650 [subtilase family protein] -0.199 -0.021
119 258437_at AT3G16560 [Protein phosphatase 2C family protein] -0.197 0.069
120 245776_at AT1G30260 unknown -0.195 0.148
121 265699_at AT2G03550 [alpha/beta-Hydrolases superfamily protein] -0.192 0.080
122 252594_at AT3G45680 [Major facilitator superfamily protein] -0.190 0.025
123 246913_at AT5G25830 GATA12, GATA transcription factor 12 -0.188 -0.030
124 262162_at AT1G78020 unknown -0.186 0.027
125 247406_at AT5G62920 ARR6, response regulator 6 -0.186 -0.039
126 264040_at AT2G03730 ACR5, ACT domain repeat 5 -0.177 0.003
127 264096_at AT1G78995 unknown -0.176 -0.016
128 262421_at AT1G50290 unknown -0.175 -0.026
129 259179_at AT3G01660 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.175 0.046
130 247827_at AT5G58500 LSH5, LIGHT SENSITIVE HYPOCOTYLS 5 -0.174 0.043
131 259043_at AT3G03440 [ARM repeat superfamily protein] -0.172 0.051
132 258252_at AT3G15720 [Pectin lyase-like superfamily protein] -0.170 0.323
133 253052_at AT4G37310 CYP81H1, cytochrome P450, family 81, subfamily H, polypeptide 1 -0.168 0.032
134 258893_at AT3G05660 AtRLP33, receptor like protein 33, RLP33, receptor like protein 33 -0.168 -0.009
135 259887_at AT1G76360 [Protein kinase superfamily protein] -0.168 0.032
136 246781_at AT5G27350 SFP1 -0.167 0.025
137 253215_at AT4G34950 [Major facilitator superfamily protein] -0.167 0.098
138 254186_at AT4G24010 ATCSLG1, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G1, CSLG1, cellulose synthase like G1 -0.163 0.102
139 256168_at AT1G51805 [Leucine-rich repeat protein kinase family protein] -0.161 0.068
140 259441_at AT1G02300 [Cysteine proteinases superfamily protein] -0.161 -0.088
141 253836_at AT4G27840 [SNARE-like superfamily protein] -0.161 0.118
142 261758_at AT1G08250 ADT6, arogenate dehydratase 6, AtADT6, Arabidopsis thaliana arogenate dehydratase 6 -0.155 0.065
143 248032_at AT5G55860 unknown -0.154 -0.006
144 253411_at AT4G32980 ATH1, homeobox gene 1 -0.149 0.110
145 262598_at AT1G15260 unknown -0.147 0.066
146 256319_at AT1G35910 TPPD, trehalose-6-phosphate phosphatase D -0.146 0.151
147 266899_at AT2G34620 [Mitochondrial transcription termination factor family protein] -0.144 -0.001
148 266617_at AT2G29670 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.143 0.037
149 259281_at AT3G01140 AtMYB106, myb domain protein 106, MYB106, myb domain protein 106, NOK, NOECK -0.141 0.055
150 258894_at AT3G05650 AtRLP32, receptor like protein 32, RLP32, receptor like protein 32 -0.141 -0.027
151 252569_at AT3G45420 LecRK-I.4, L-type lectin receptor kinase I.4 -0.140 -0.048
152 250741_at AT5G05790 [Duplicated homeodomain-like superfamily protein] -0.139 0.029
153 247549_at AT5G61420 AtMYB28, HAG1, HIGH ALIPHATIC GLUCOSINOLATE 1, MYB28, myb domain protein 28, PMG1, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1 -0.138 0.061
154 253326_at AT4G33440 [Pectin lyase-like superfamily protein] -0.138 -0.006
155 265894_at AT2G15050 LTP, lipid transfer protein, LTP7, lipid transfer protein 7 -0.134 0.113
156 249575_at AT5G37670 [HSP20-like chaperones superfamily protein] -0.134 0.048
157 252040_at AT3G52060 AtGnTL, GnTL, beta-1,6-N-acetylglucosaminyl transferase-like -0.132 0.014
158 255255_at AT4G05070 [Wound-responsive family protein] -0.132 -0.028
159 254119_at AT4G24780 [Pectin lyase-like superfamily protein] -0.130 0.020
160 245304_at AT4G15630 [Uncharacterised protein family (UPF0497)] -0.130 0.086
161 262748_at AT1G28610 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.129 0.200
162 252661_at AT3G44450 unknown -0.129 0.243
163 248908_at AT5G45800 MEE62, maternal effect embryo arrest 62 -0.126 -0.012
164 253038_at AT4G37790 HAT22 -0.126 -0.054
165 265664_at AT2G24420 [DNA repair ATPase-related] -0.126 0.127
166 263135_at AT1G78550 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.125 -0.002
167 251670_at AT3G57190 PrfB3, peptide chain release factor 3 -0.124 0.031
168 254133_at AT4G24810 [Protein kinase superfamily protein] -0.124 -0.042
169 259853_at AT1G72300 PSY1R, PSY1 receptor -0.124 0.059
170 255171_at AT4G07990 [Chaperone DnaJ-domain superfamily protein] -0.123 0.064
171 246217_at AT4G36920 AP2, APETALA 2, AtAP2, FL1, FLOWER 1, FLO2, FLORAL MUTANT 2 -0.123 0.029
172 262650_at AT1G14090 [pseudogene] -0.120 -0.038
173 249006_at AT5G44660 unknown -0.119 -0.041
174 264057_at AT2G28550 RAP2.7, related to AP2.7, TOE1, TARGET OF EARLY ACTIVATION TAGGED (EAT) 1 -0.118 0.086
175 262635_at AT1G06570 HPD, 4-hydroxyphenylpyruvate dioxygenase, HPPD, 4-hydroxyphenylpyruvate dioxygenase, PDS1, phytoene desaturation 1 -0.118 -0.047
176 261120_at AT1G75410 BLH3, BEL1-like homeodomain 3 -0.118 0.030
177 262711_at AT1G16500 unknown -0.117 0.095
178 247087_at AT5G66330 [Leucine-rich repeat (LRR) family protein] -0.117 -0.015
179 248502_at AT5G50450 [HCP-like superfamily protein with MYND-type zinc finger] -0.117 -0.116
180 252825_at AT4G39890 AtRABH1c, RAB GTPase homolog H1C, RABH1c, RAB GTPase homolog H1C -0.116 -0.217
181 245296_at AT4G16370 oligopeptide transporter -0.116 0.026
182 255438_at AT4G03070 AOP, AOP1, AOP1.1 -0.113 0.095
183 250524_at AT5G08520 [Duplicated homeodomain-like superfamily protein] -0.111 -0.036