4.0:Information of module
12 hour 5929745
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006354 DNA-templated transcription, elongation BP 2.174e-04
GO:0043086 negative regulation of catalytic activit... BP 2.766e-03
GO:0044092 negative regulation of molecular functio... BP 5.049e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006354 DNA-templated transcription, elongation BP 6.778e-03
GO:0006855 drug transmembrane transport BP 1.380e-02
GO:0006826 iron ion transport BP 1.402e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
12 hour 5929745		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 266767_at AT2G46910 [Plastid-lipid associated protein PAP / fibrillin family protein] 0.288 0.042
2 251320_at AT3G61530 PANB2 0.198 -0.065
3 261301_at AT1G48570 [zinc finger (Ran-binding) family protein] 0.193 0.147
4 247561_at AT5G61110 [zinc ion binding] 0.179 0.271
5 245581_at AT4G14840 unknown 0.157 0.051
6 256615_at AT3G22250 [UDP-Glycosyltransferase superfamily protein] 0.154 0.058
7 244921_s_at ATMG01000 ORF114 0.152 -0.150
8 261072_at AT1G07340 ATSTP2, sugar transporter 2, STP2, sugar transporter 2 0.145 -0.636
9 267185_at AT2G43950 ATOEP37, ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, OEP37, chloroplast outer envelope protein 37 0.136 0.097
10 264565_at AT1G05280 unknown 0.130 0.116
11 253868_at AT4G27500 PPI1, proton pump interactor 1 0.129 0.292
12 266928_at AT2G45790 ATPMM, PHOSPHOMANNOMUTASE, PMM, phosphomannomutase 0.119 0.091
13 250501_at AT5G09640 SCPL19, serine carboxypeptidase-like 19, SNG2, SINAPOYLGLUCOSE ACCUMULATOR 2 0.117 0.105
14 267568_at AT2G30780 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.116 0.054
15 263949_at AT2G36060 MMZ3, MMS ZWEI homologue 3, UEV1C, UBIQUITIN E2 VARIANT 1C 0.112 0.039
16 248631_at AT5G49000 [Galactose oxidase/kelch repeat superfamily protein] 0.111 0.006
17 262744_at AT1G28680 [HXXXD-type acyl-transferase family protein] 0.110 -0.026
18 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 0.108 0.286
19 254403_at AT4G21323 [Subtilase family protein] 0.106 0.143
20 251249_at AT3G62160 [HXXXD-type acyl-transferase family protein] 0.106 0.112
21 248259_at AT5G53330 [Ubiquitin-associated/translation elongation factor EF1B protein] 0.106 0.111
22 263687_at AT1G26940 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 0.100 -0.256
23 264522_at AT1G10050 [glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein] 0.099 -0.224
24 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 0.081 0.018
25 259399_at AT1G17710 AtPEPC1, Arabidopsis thaliana phosphoethanolamine/phosphocholine phosphatase 1, PEPC1, phosphoethanolamine/phosphocholine phosphatase 1 0.081 -0.058
26 267273_at AT2G02520 [RNA-directed DNA polymerase (reverse transcriptase)-related family protein] 0.081 0.015
27 253473_at AT4G32250 [Protein kinase superfamily protein] 0.079 -0.123
28 248023_at AT5G56450 PM-ANT 0.076 -0.156
29 250110_at AT5G15350 AtENODL17, ENODL17, early nodulin-like protein 17 0.072 0.104
30 255299_at AT4G04880 [adenosine/AMP deaminase family protein] 0.072 -0.008
31 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.071 0.274
32 257574_at AT3G20710 [F-box family protein] 0.070 0.406
33 253272_at AT4G34190 SEP1, stress enhanced protein 1 0.069 -0.043
34 267405_at AT2G33740 CUTA 0.066 -0.049
35 246265_at AT1G31860 AT-IE, HISN2, HISTIDINE BIOSYNTHESIS 2 0.065 0.250
36 265116_at AT1G62480 [Vacuolar calcium-binding protein-related] 0.063 0.109
37 247969_at AT5G56700 [FBD / Leucine Rich Repeat domains containing protein] 0.062 0.456
38 250291_at AT5G13280 AK, ASPARTATE KINASE, AK-LYS1, aspartate kinase 1, AK1, ASPARTATE KINASE 1 0.060 -0.023
39 253313_at AT4G33870 [Peroxidase superfamily protein] 0.060 0.125
40 251829_at AT3G55020 [Ypt/Rab-GAP domain of gyp1p superfamily protein] 0.059 0.202
41 251327_at AT3G61540 [alpha/beta-Hydrolases superfamily protein] 0.059 0.068
42 247198_at AT5G65290 [LMBR1-like membrane protein] 0.057 0.171
43 255694_at AT4G00050 UNE10, unfertilized embryo sac 10 0.055 0.167
44 246995_at AT5G67470 ATFH6, ARABIDOPSIS FORMIN HOMOLOG 6, FH6, formin homolog 6 0.054 0.081
45 250724_at AT5G06330 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.054 0.093
46 252050_at AT3G52550 unknown 0.053 -0.398
47 252421_at AT3G47540 [Chitinase family protein] 0.053 0.116
48 251336_at AT3G61190 BAP1, BON association protein 1 0.052 0.181
49 250322_at AT5G12870 ATMYB46, MYB DOMAIN PROTEIN 46, MYB46, myb domain protein 46 0.051 -0.122
50 254754_at AT4G13210 [Pectin lyase-like superfamily protein] 0.051 -0.156
51 246418_at AT5G16960 [Zinc-binding dehydrogenase family protein] 0.051 -0.059
52 254918_at AT4G11260 ATSGT1B, EDM1, ENHANCED DOWNY MILDEW 1, ETA3, ENHANCER OF TIR1-1 AUXIN RESISTANCE 3, RPR1, SGT1B 0.050 -0.102
53 257706_at AT3G12685 [Acid phosphatase/vanadium-dependent haloperoxidase-related protein] 0.048 0.075
54 267057_at AT2G32500 [Stress responsive alpha-beta barrel domain protein] 0.047 0.108
55 256728_at AT3G25660 [Amidase family protein] 0.047 0.222
56 258140_at AT3G24503 ALDH1A, aldehyde dehydrogenase 1A, ALDH2C4, aldehyde dehydrogenase 2C4, REF1, REDUCED EPIDERMAL FLUORESCENCE1 0.046 0.039
57 249837_at AT5G23480 [SWIB/MDM2 domain] -0.217 0.199
58 248357_at AT5G52380 [VASCULAR-RELATED NAC-DOMAIN 6] -0.216 0.099
59 262377_at AT1G73110 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.211 0.004
60 256926_at AT3G22540 unknown -0.192 -0.495
61 245779_at AT1G73510 unknown -0.185 -0.128
62 249503_at AT5G39310 ATEXP24, ATEXPA24, expansin A24, ATHEXP ALPHA 1.19, EXP24, EXPANSIN 24, EXPA24, expansin A24 -0.181 0.057
63 261759_at AT1G15590 unknown -0.178 -0.091
64 264917_at AT1G60500 DRP4C, Dynamin related protein 4C -0.176 -0.133
65 264762_at AT1G61460 [S-locus protein kinase, putative] -0.166 0.052
66 254512_at AT4G20230 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.165 -0.010
67 255516_at AT4G02270 RHS13, root hair specific 13 -0.163 -0.024
68 250302_at AT5G11920 AtcwINV6, 6-&1-fructan exohydrolase, cwINV6, 6-&1-fructan exohydrolase -0.161 0.045
69 264981_at AT1G27160 [valyl-tRNA synthetase / valine--tRNA ligase-related] -0.161 0.028
70 246935_at AT5G25350 EBF2, EIN3-binding F box protein 2 -0.160 -0.068
71 263000_at AT1G54350 ABCD2, ATP-binding cassette D2 -0.158 0.042
72 245310_at AT4G13950 RALFL31, ralf-like 31 -0.156 -0.169
73 263541_at AT2G24860 [DnaJ/Hsp40 cysteine-rich domain superfamily protein] -0.155 0.179
74 251856_at AT3G54720 AMP1, ALTERED MERISTEM PROGRAM 1, AtAMP1, COP2, CONSTITUTIVE MORPHOGENESIS 2, HPT, HAUPTLING, MFO1, Multifolia, PT, PRIMORDIA TIMING -0.155 0.041
75 259549_at AT1G35290 ALT1, acyl-lipid thioesterase 1 -0.153 0.127
76 254665_at AT4G18340 [Glycosyl hydrolase superfamily protein] -0.153 -0.177
77 262845_at AT1G14740 TTA1, TITANIA 1 -0.151 0.253
78 247375_at AT5G63135 unknown -0.147 -0.144
79 244938_at ATCG01120 RPS15, chloroplast ribosomal protein S15 -0.146 0.338
80 264094_at AT1G79200 SCI1, stigma/style cell-cycle inhibitor 1 -0.144 -0.137
81 256049_at AT1G07010 AtSLP1, SLP1, Shewenella-like protein phosphatase 1 -0.144 -0.088
82 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 -0.143 0.060
83 257978_at AT3G20860 ATNEK5, NIMA-related kinase 5, NEK5, NIMA-related kinase 5 -0.143 -0.100
84 245873_at AT1G26260 CIB5, cryptochrome-interacting basic-helix-loop-helix 5 -0.142 -0.106
85 263496_at AT2G42570 TBL39, TRICHOME BIREFRINGENCE-LIKE 39 -0.141 -0.046
86 266614_at AT2G14910 unknown -0.141 -0.053
87 257205_at AT3G16520 UGT88A1, UDP-glucosyl transferase 88A1 -0.140 -0.198
88 261171_at AT1G04880 [HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain] -0.138 0.094
89 254874_at AT4G11570 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.137 0.033
90 260645_at AT1G53300 TTL1, tetratricopeptide-repeat thioredoxin-like 1 -0.136 0.078
91 262441_at AT1G47720 OSB1, Organellar Single-stranded -0.135 -0.066
92 266460_at AT2G47930 AGP26, arabinogalactan protein 26, ATAGP26, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 26 -0.134 0.026
93 258656_at AT3G09900 ATRAB8E, ATRABE1E, RAB GTPase homolog E1E, RABE1e, RAB GTPase homolog E1E -0.134 0.077
94 262710_at AT1G16210 unknown -0.133 0.075
95 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 -0.133 -0.048
96 257734_at AT3G18370 ATSYTF, NTMC2T3, NTMC2TYPE3, SYTF -0.132 -0.070
97 258047_at AT3G21240 4CL2, 4-coumarate:CoA ligase 2, AT4CL2 -0.131 0.059
98 248718_at AT5G47770 FPS1, farnesyl diphosphate synthase 1 -0.130 0.083
99 257711_at AT3G27430 PBB1 -0.129 0.056
100 245652_at AT4G13960 [F-box/RNI-like superfamily protein] -0.129 0.124
101 248392_at AT5G52050 [MATE efflux family protein] -0.128 -0.036
102 266845_at AT2G26110 unknown -0.128 -0.372
103 248294_at AT5G53060 RCF3, regulator of CBF gene expression 3, SHI1, SHINY 1 -0.127 0.082
104 247038_at AT5G67160 EPS1, ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 -0.126 0.075
105 254361_at AT4G22212 [Arabidopsis defensin-like protein] -0.126 0.014
106 263907_at AT2G36270 ABI5, ABA INSENSITIVE 5, AtABI5, GIA1, GROWTH-INSENSITIVITY TO ABA 1 -0.126 -0.073
107 256900_at AT3G24670 [Pectin lyase-like superfamily protein] -0.125 -0.432
108 253275_at AT4G34215 unknown -0.124 -0.059
109 245586_at AT4G14980 [Cysteine/Histidine-rich C1 domain family protein] -0.124 -0.134
110 262463_at AT1G50310 ATSTP9, SUGAR TRANSPORTER 9, STP9, sugar transporter 9 -0.124 -0.100
111 246915_at AT5G25880 ATNADP-ME3, Arabidopsis thaliana NADP-malic enzyme 3, NADP-ME3, NADP-malic enzyme 3 -0.123 0.008