4.0:Information of module
Total RNA 35S:HF-RPL18 cold
In comparison with Col BTH help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044271 cellular nitrogen compound biosynthetic ... BP 1.944e-03
GO:0043170 macromolecule metabolic process BP 2.074e-03
GO:0034654 nucleobase-containing compound biosynthe... BP 2.222e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006412 translation BP 2.286e-11
GO:0001510 RNA methylation BP 1.266e-07
GO:0042254 ribosome biogenesis BP 3.502e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Total RNA 35S:HF-RPL18 cold		 Log2 signal ratio
Col BTH
1 262719_at AT1G43590 unknown 0.583 -0.032
2 264981_at AT1G27160 [valyl-tRNA synthetase / valine--tRNA ligase-related] 0.213 -0.053
3 253129_at AT4G36020 AtCSP1, CSDP1, cold shock domain protein 1, CSP1, cold shock protein 1 0.213 -0.052
4 267450_at AT2G33720 [AP2/B3-like transcriptional factor family protein] 0.181 0.019
5 258900_at AT3G05590 RPL18, ribosomal protein L18 0.147 -0.014
6 257478_at AT1G16130 WAKL2, wall associated kinase-like 2 0.142 0.127
7 261366_at AT1G53100 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] 0.138 0.232
8 267328_at AT2G19230 [Leucine-rich repeat transmembrane protein kinase protein] 0.138 -0.002
9 251051_at AT5G02460 [Dof-type zinc finger DNA-binding family protein] 0.137 -0.074
10 257920_at AT3G23260 [F-box and associated interaction domains-containing protein] 0.136 -0.044
11 266356_at AT2G32300 UCC1, uclacyanin 1 0.125 -0.005
12 249549_at AT5G38180 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.123 -0.013
13 262461_at AT1G50360 ATVIIIA, MYOSIN VIII A, VIIIA 0.116 0.150
14 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 0.113 0.087
15 247284_at AT5G64410 ATOPT4, ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 4, OPT4, oligopeptide transporter 4 0.112 0.142
16 248490_at AT5G50940 [RNA-binding KH domain-containing protein] 0.108 -0.009
17 254664_at AT4G18300 [Trimeric LpxA-like enzyme] 0.108 0.134
18 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 -0.195 -0.007
19 258287_at AT3G15990 SULTR3;4, sulfate transporter 3;4 -0.194 -0.052
20 261178_at AT1G04760 ATVAMP726, vesicle-associated membrane protein 726, VAMP726, vesicle-associated membrane protein 726 -0.162 -0.001
21 247632_at AT5G60460 [Preprotein translocase Sec, Sec61-beta subunit protein] -0.156 0.027
22 247911_at AT5G57450 ATXRCC3, ARABIDOPSIS THALIANA HOMOLOG OF X-RAY REPAIR CROSS COMPLEMENTING 3 (XRCC3), XRCC3, homolog of X-ray repair cross complementing 3 -0.152 -0.023
23 245380_at AT4G17760 [damaged DNA binding] -0.150 -0.109
24 257821_at AT3G25170 RALFL26, ralf-like 26 -0.141 -0.023
25 251294_at AT3G61940 ATMTPA1, MTPA1 -0.139 0.009
26 254203_at AT4G24150 AtGRF8, growth-regulating factor 8, GRF8, growth-regulating factor 8 -0.139 -0.035
27 248315_at AT5G52630 MEF1, mitochondrial RNA editing factor 1 -0.138 0.021
28 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 -0.132 -0.077
29 267236_at AT2G44100 AT-GDI1, ATGDI1, guanosine nucleotide diphosphate dissociation inhibitor 1, GDI1, guanosine nucleotide diphosphate dissociation inhibitor 1 -0.125 0.027
30 254361_at AT4G22212 [Arabidopsis defensin-like protein] -0.122 -0.010
31 257114_at AT3G20140 CYP705A23, cytochrome P450, family 705, subfamily A, polypeptide 23 -0.120 -0.045
32 266271_at AT2G29440 ATGSTU6, glutathione S-transferase tau 6, GST24, GLUTATHIONE S-TRANSFERASE 24, GSTU6, glutathione S-transferase tau 6 -0.115 -0.121
33 265309_at AT2G20290 ATXIG, MYOSIN XI G, XIG, myosin-like protein XIG -0.109 -0.260