4.0:Information of module
Total RNA 35S:AtCSP1-FH1
In comparison with xyl-grown cell culture- 1h 1mM Suc help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0035725 sodium ion transmembrane transport BP 1.456e-02
GO:0006814 sodium ion transport BP 2.035e-02
GO:0006801 superoxide metabolic process BP 2.042e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0080022 primary root development BP 1.198e-02
GO:0010583 response to cyclopentenone BP 1.513e-02
GO:0051252 regulation of RNA metabolic process BP 2.578e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Total RNA 35S:AtCSP1-FH1		 Log2 signal ratio
xyl-grown cell culture- 1h 1mM Suc
1 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 0.798 0.046
2 262900_at AT1G59890 SNL5, SIN3-like 5 0.359 -0.015
3 253129_at AT4G36020 AtCSP1, CSDP1, cold shock domain protein 1, CSP1, cold shock protein 1 0.316 -0.017
4 259384_at AT3G16450 JAL33, Jacalin-related lectin 33 0.260 0.064
5 253720_at AT4G29270 [HAD superfamily, subfamily IIIB acid phosphatase ] 0.225 0.069
6 253514_at AT4G31805 POLAR, POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION 0.215 0.000
7 253807_at AT4G28280 LLG3, LORELEI-LIKE-GPI ANCHORED PROTEIN 3 0.164 -0.057
8 261567_at AT1G33055 unknown 0.159 -0.039
9 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.151 0.037
10 260692_at AT1G32430 [F-box and associated interaction domains-containing protein] 0.149 0.067
11 266670_at AT2G29740 UGT71C2, UDP-glucosyl transferase 71C2 0.148 0.040
12 260134_at AT1G66370 AtMYB113, myb domain protein 113, MYB113, myb domain protein 113 0.146 -0.003
13 255812_at AT4G10310 ATHKT1, HKT1, high-affinity K+ transporter 1, HKT1;1 0.136 -0.043
14 257514_at AT1G43940 unknown 0.132 0.004
15 251448_at AT3G59845 [Zinc-binding dehydrogenase family protein] 0.131 0.008
16 261591_at AT1G01740 BSK4, brassinosteroid-signaling kinase 4 0.131 0.052
17 247591_at AT5G60770 ATNRT2.4, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.4, NRT2.4, nitrate transporter 2.4 0.127 -0.037
18 253044_at AT4G37290 unknown 0.121 0.001
19 256569_at AT3G19550 unknown -0.255 0.079
20 252938_at AT4G39190 unknown -0.200 0.123
21 262171_at AT1G74950 JAZ2, JASMONATE-ZIM-DOMAIN PROTEIN 2, TIFY10B -0.182 0.010
22 263092_at AT2G16210 [Transcriptional factor B3 family protein] -0.181 0.033
23 248706_at AT5G48530 unknown -0.153 0.023
24 258583_at AT3G04100 AGL57, AGAMOUS-like 57 -0.146 -0.109
25 246382_at AT1G39350 transposable element gene -0.145 0.029
26 257486_at AT1G63590 [Receptor-like protein kinase-related family protein] -0.129 -0.039
27 248987_at AT5G45180 [Flavin-binding monooxygenase family protein] -0.124 0.027
28 261748_at AT1G76070 unknown -0.124 0.022
29 252196_at AT3G50200 unknown -0.116 0.059
30 258726_at AT3G11745 unknown -0.115 0.067
31 262485_at AT1G21730 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.114 -0.006
32 258564_at AT3G06560 PAPS3, poly(A) polymerase 3 -0.112 0.025
33 264288_at AT1G62045 unknown -0.104 0.129
34 266844_at AT2G26120 [glycine-rich protein] -0.101 -0.078
35 259116_at AT3G01350 [Major facilitator superfamily protein] -0.101 0.064