4.0:Information of module
Total RNA 35S:AtCSP1-FH1 cold
In comparison with AtHDA6(rts1-1) rts1-5 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001708 cell fate specification BP 1.093e-04
GO:0045165 cell fate commitment BP 2.531e-04
GO:0007015 actin filament organization BP 7.288e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010876 lipid localization BP 4.219e-03
GO:0019915 lipid storage BP 8.510e-03
GO:0051510 regulation of unidimensional cell growth BP 1.056e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Total RNA 35S:AtCSP1-FH1 cold		 Log2 signal ratio
AtHDA6(rts1-1) rts1-5
1 253129_at AT4G36020 AtCSP1, CSDP1, cold shock domain protein 1, CSP1, cold shock protein 1 0.384 0.007
2 264009_at AT2G21110 [Disease resistance-responsive (dirigent-like protein) family protein] 0.184 -0.114
3 247358_at AT5G63580 ATFLS2, FLS2, flavonol synthase 2 0.170 0.010
4 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 0.167 -0.023
5 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 0.166 -0.021
6 260122_at AT1G33900 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.149 -0.025
7 264278_at AT1G60130 [Mannose-binding lectin superfamily protein] 0.136 -0.118
8 263896_at AT2G21930 [F-box associated ubiquitination effector family protein] 0.136 -0.098
9 255726_at AT1G25530 [Transmembrane amino acid transporter family protein] 0.135 -0.119
10 257288_at AT3G29670 PMAT2, phenolic glucoside malonyltransferase 2 0.133 -0.010
11 246949_at AT5G25140 CYP71B13, cytochrome P450, family 71, subfamily B, polypeptide 13 0.131 0.129
12 265425_at AT2G20770 GCL2, GCR2-like 2 0.124 -0.076
13 262981_at AT1G75590 SAUR52, SMALL AUXIN UPREGULATED RNA 52 0.121 0.120
14 253680_at AT4G29620 [Cytidine/deoxycytidylate deaminase family protein] 0.112 -0.057
15 258571_at AT3G04420 anac048, NAC domain containing protein 48, NAC048, NAC domain containing protein 48 -0.175 0.031
16 266063_at AT2G18760 CHR8, chromatin remodeling 8 -0.156 0.066
17 254574_at AT4G19430 unknown -0.154 0.083
18 261280_at AT1G05860 unknown -0.151 0.133
19 266374_at AT2G14640 [gypsy-like retrotransposon family, has a 2.5e-119 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] -0.148 0.019
20 248315_at AT5G52630 MEF1, mitochondrial RNA editing factor 1 -0.146 0.177
21 252515_at AT3G46230 ATHSP17.4, ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.4, HSP17.4, heat shock protein 17.4 -0.138 0.067
22 259291_at AT3G11550 CASP2, Casparian strip membrane domain protein 2 -0.138 0.057
23 254837_at AT4G12360 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.126 0.055
24 266972_at AT2G39590 [Ribosomal protein S8 family protein] -0.126 0.024
25 245567_at AT4G14630 GLP9, germin-like protein 9 -0.124 -0.037
26 267584_at AT2G41930 [Protein kinase superfamily protein] -0.123 -0.042
27 255138_at AT4G08380 [Proline-rich extensin-like family protein] -0.122 -0.063