4.0:Information of module
Polysomal RNA 35S:AtCSP1-FH1
In comparison with siliques AtHb1 control help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010087 phloem or xylem histogenesis BP 3.865e-03
GO:0000041 transition metal ion transport BP 4.193e-03
GO:0010440 stomatal lineage progression BP 6.174e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009410 response to xenobiotic stimulus BP 3.821e-04
GO:0033554 cellular response to stress BP 7.497e-04
GO:0009626 plant-type hypersensitive response BP 3.174e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Polysomal RNA 35S:AtCSP1-FH1		 Log2 signal ratio
siliques AtHb1 control
1 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 0.882 -0.068
2 254327_at AT4G22490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.540 -0.061
3 257952_at AT3G21770 [Peroxidase superfamily protein] 0.509 -0.119
4 253129_at AT4G36020 AtCSP1, CSDP1, cold shock domain protein 1, CSP1, cold shock protein 1 0.307 -0.015
5 252202_at AT3G50300 [HXXXD-type acyl-transferase family protein] 0.271 -0.030
6 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 0.233 -0.010
7 260668_at AT1G19530 unknown 0.233 0.161
8 245688_at AT1G28290 AGP31, arabinogalactan protein 31 0.226 0.210
9 250288_at AT5G13350 [Auxin-responsive GH3 family protein] 0.218 -0.016
10 247998_at AT5G56200 [C2H2 type zinc finger transcription factor family] 0.204 0.078
11 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.197 0.040
12 256128_at AT1G18140 ATLAC1, LAC1, laccase 1 0.196 -0.033
13 257630_at AT3G26150 CYP71B16, cytochrome P450, family 71, subfamily B, polypeptide 16 0.194 -0.034
14 253148_at AT4G35620 CYCB2;2, Cyclin B2;2 0.181 -0.020
15 266596_at AT2G46150 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.180 -0.154
16 256032_at AT1G34090 [copia-like retrotransposon family, has a 8.8e-131 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)] 0.179 0.027
17 262389_at AT1G49270 AtPERK7, proline-rich extensin-like receptor kinase 7, PERK7, proline-rich extensin-like receptor kinase 7 0.177 -0.085
18 257678_at AT3G20420 ATRTL2, RNASEIII-LIKE 2, RTL2, RNAse THREE-like protein 2 -0.334 -0.016
19 251670_at AT3G57190 PrfB3, peptide chain release factor 3 -0.213 -0.104
20 258019_at AT3G19470 [F-box and associated interaction domains-containing protein] -0.212 0.011
21 247602_at AT5G60900 RLK1, receptor-like protein kinase 1 -0.182 0.144
22 264077_at AT2G28560 ATRAD51B, RAD51B -0.180 -0.052
23 263374_at AT2G20560 [DNAJ heat shock family protein] -0.163 0.007
24 255287_at AT4G04660 [pseudogene] -0.162 -0.030
25 259467_at AT1G19060 unknown -0.156 -0.048
26 264531_at AT1G30790 [F-box and associated interaction domains-containing protein] -0.155 -0.011
27 266530_at AT2G16910 AMS, ABORTED MICROSPORES -0.151 0.016
28 248852_at AT5G46560 unknown -0.145 -0.061
29 258770_at AT3G10820 [Transcription elongation factor (TFIIS) family protein] -0.135 0.039
30 254411_at AT4G21420 [gypsy-like retrotransposon family, has a 6.9e-06 P-value blast match to GB:BAA84458 GAG-POL precursor (gypsy_Ty3-element) (Oryza sativa)gi|5902445|dbj|BAA84458.1| GAG-POL precursor (Oryza sativa (japonica cultivar-group)) (RIRE2) (Gypsy_Ty3-family)] -0.131 -0.008
31 262843_at AT1G14687 AtHB32, homeobox protein 32, HB32, homeobox protein 32, ZHD14, ZINC FINGER HOMEODOMAIN 14 -0.129 0.209
32 258740_at AT3G05780 LON3, lon protease 3 -0.125 -0.008
33 257825_at AT3G26700 [Protein kinase superfamily protein] -0.124 -0.148