4.0:Information of module
amiR-tor induced 6d
In comparison with spx1 spx2 complete help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 3.956e-11
GO:0050896 response to stimulus BP 2.555e-10
GO:0010035 response to inorganic substance BP 2.646e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009746 response to hexose BP 1.031e-03
GO:0034284 response to monosaccharide BP 1.301e-03
GO:0009750 response to fructose BP 5.304e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
amiR-tor induced 6d		 Log2 signal ratio
spx1 spx2 complete
1 245628_at AT1G56650 ATMYB75, MYB DOMAIN PROTEIN 75, MYB75, MYELOBLASTOSIS PROTEIN 75, PAP1, production of anthocyanin pigment 1, SIAA1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 0.866 0.514
2 252320_at AT3G48580 XTH11, xyloglucan endotransglucosylase/hydrolase 11 0.805 0.036
3 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.670 0.340
4 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.652 -0.025
5 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 0.634 0.234
6 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 0.622 -0.023
7 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.616 0.199
8 265539_at AT2G15830 unknown 0.506 -0.105
9 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.491 1.065
10 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.490 0.601
11 248545_at AT5G50260 CEP1, cysteine endopeptidase 1 0.434 -0.016
12 263497_at AT2G42540 COR15, COR15A, cold-regulated 15a 0.387 0.976
13 256349_at AT1G54890 [Late embryogenesis abundant (LEA) protein-related] 0.381 0.009
14 258182_at AT3G21500 DXL1, DXS-like 1, DXPS1, 1-deoxy-D-xylulose 5-phosphate synthase 1, DXS2, 1-deoxy-D-xylulose 5-phosphate (DXP) synthase 2 0.354 0.036
15 251293_at AT3G61930 unknown 0.335 0.190
16 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.332 0.484
17 260408_at AT1G69880 ATH8, thioredoxin H-type 8, TH8, thioredoxin H-type 8 0.325 0.512
18 262454_at AT1G11190 BFN1, bifunctional nuclease i, ENDO1, ENDONUCLEASE 1 0.322 0.028
19 249955_at AT5G18840 [Major facilitator superfamily protein] 0.305 0.105
20 266376_at AT2G14620 XTH10, xyloglucan endotransglucosylase/hydrolase 10 0.302 -0.014
21 264186_at AT1G54570 PES1, phytyl ester synthase 1 0.299 0.227
22 258880_at AT3G06420 ATG8H, autophagy 8h 0.294 0.005
23 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.287 0.399
24 265913_at AT2G25625 unknown 0.277 -0.031
25 266292_at AT2G29350 SAG13, senescence-associated gene 13 0.274 0.353
26 260581_at AT2G47190 ATMYB2, MYB DOMAIN PROTEIN 2, MYB2, myb domain protein 2 0.271 -0.035
27 262357_at AT1G73040 [Mannose-binding lectin superfamily protein] 0.261 -0.052
28 262640_at AT1G62760 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.260 0.024
29 264415_at AT1G43160 RAP2.6, related to AP2 6 0.259 0.557
30 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.254 0.075
31 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 0.253 0.229
32 259133_at AT3G05400 [Major facilitator superfamily protein] 0.240 0.018
33 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.239 0.319
34 266393_at AT2G41260 ATM17, M17 -0.760 0.021
35 251196_at AT3G62950 [Thioredoxin superfamily protein] -0.484 -0.071
36 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] -0.351 -0.363
37 255331_at AT4G04330 AtRbcX1, RbcX1, homologue of cyanobacterial RbcX 1 -0.316 0.564
38 257964_at AT3G19850 [Phototropic-responsive NPH3 family protein] -0.302 -0.234
39 254931_at AT4G11460 CRK30, cysteine-rich RLK (RECEPTOR-like protein kinase) 30 -0.284 -0.111
40 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 -0.260 -0.052
41 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.237 -0.232
42 256469_at AT1G32540 LOL1, lsd one like 1 -0.229 -0.069
43 256569_at AT3G19550 unknown -0.201 -0.132
44 246251_at AT4G37220 [Cold acclimation protein WCOR413 family] -0.190 -0.109
45 264774_at AT1G22890 unknown -0.182 -0.139
46 258225_at AT3G15630 unknown -0.179 -0.039
47 264682_at AT1G65570 [Pectin lyase-like superfamily protein] -0.171 -0.037
48 257735_at AT3G27400 [Pectin lyase-like superfamily protein] -0.170 0.100
49 253892_at AT4G27620 unknown -0.170 0.085
50 247980_at AT5G56860 GATA21, GATA TRANSCRIPTION FACTOR 21, GNC, GATA, nitrate-inducible, carbon metabolism-involved -0.154 -0.139
51 251996_at AT3G52840 BGAL2, beta-galactosidase 2 -0.150 -0.071
52 251771_at AT3G56000 ATCSLA14, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A14, CSLA14, cellulose synthase like A14 -0.149 -0.152
53 264340_at AT1G70280 [NHL domain-containing protein] -0.144 -0.042
54 264350_at AT1G11870 ATSRS, OVA7, ovule abortion 7, SRS, Seryl-tRNA synthetase -0.143 -0.034
55 262502_at AT1G21600 PTAC6, plastid transcriptionally active 6 -0.142 0.012
56 245774_at AT1G30210 ATTCP24, TCP24, TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 -0.136 0.075
57 259839_at AT1G52190 AtNPF1.2, NPF1.2, NRT1/ PTR family 1.2, NRT1.11, nitrate transporter 1.11 -0.136 -0.174
58 250593_at AT5G07740 [actin binding] -0.131 -0.077
59 251966_at AT3G53380 LecRK-VIII.1, L-type lectin receptor kinase VIII.1 -0.129 -0.023
60 247078_at AT5G66000 unknown -0.128 -0.043
61 265586_at AT2G19990 PR-1-LIKE, pathogenesis-related protein-1-like -0.127 -0.109
62 257543_at AT3G28960 [Transmembrane amino acid transporter family protein] -0.127 -0.081
63 249918_at AT5G19240 [Glycoprotein membrane precursor GPI-anchored] -0.127 0.129
64 246028_at AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein -0.126 -0.165
65 256772_at AT3G13750 BGAL1, beta galactosidase 1, BGAL1, beta-galactosidase 1 -0.126 -0.137