4.0:Information of module
amiR-tor induced 3d
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044712 single-organism catabolic process BP 4.003e-11
GO:0044248 cellular catabolic process BP 1.437e-10
GO:0009056 catabolic process BP 2.392e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006857 oligopeptide transport BP 3.707e-03
GO:0015833 peptide transport BP 3.707e-03
GO:0001708 cell fate specification BP 4.462e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
amiR-tor induced 3d		 Log2 signal ratio
bri1-116
1 256789_at AT3G13672 SINA2 0.430 0.045
2 264514_at AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] 0.370 0.076
3 258064_at AT3G14680 CYP72A14, cytochrome P450, family 72, subfamily A, polypeptide 14 0.351 -0.103
4 256181_at AT1G51820 [Leucine-rich repeat protein kinase family protein] 0.337 0.037
5 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.303 -0.190
6 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A 0.292 -0.042
7 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.256 0.010
8 246395_at AT1G58170 [Disease resistance-responsive (dirigent-like protein) family protein] 0.236 -0.180
9 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.235 0.412
10 260706_at AT1G32350 AOX1D, alternative oxidase 1D 0.228 -0.367
11 265059_at AT1G52080 AR791 0.227 -0.106
12 260438_at AT1G68290 ENDO2, endonuclease 2 0.225 -0.073
13 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 0.223 -0.036
14 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] 0.219 -0.130
15 263402_at AT2G04050 [MATE efflux family protein] 0.209 -0.101
16 265501_at AT2G15490 UGT73B4, UDP-glycosyltransferase 73B4 0.203 -0.118
17 260335_at AT1G74000 SS3, strictosidine synthase 3 0.202 0.185
18 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.201 -0.015
19 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 0.200 -0.351
20 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.195 -0.231
21 247293_at AT5G64510 TIN1, tunicamycin induced 1 0.181 -0.267
22 262935_at AT1G79410 AtOCT5, organic cation/carnitine transporter5, OCT5, organic cation/carnitine transporter5 0.180 0.063
23 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] 0.177 0.146
24 259794_at AT1G64330 [myosin heavy chain-related] 0.175 -0.089
25 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.173 -0.352
26 263515_at AT2G21640 unknown 0.172 -0.118
27 258134_at AT3G24530 [AAA-type ATPase family protein / ankyrin repeat family protein] 0.170 -0.138
28 251975_at AT3G53230 AtCDC48B, cell division cycle 48B 0.168 -0.089
29 255340_at AT4G04490 CRK36, cysteine-rich RLK (RECEPTOR-like protein kinase) 36 0.168 0.023
30 252487_at AT3G46660 UGT76E12, UDP-glucosyl transferase 76E12 0.165 0.027
31 266292_at AT2G29350 SAG13, senescence-associated gene 13 0.162 0.063
32 259618_at AT1G48000 AtMYB112, myb domain protein 112, MYB112, myb domain protein 112 0.160 0.058
33 262967_at AT1G75730 unknown 0.159 -0.082
34 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] 0.158 -0.628
35 250798_at AT5G05340 PRX52, peroxidase 52 -0.222 -0.040
36 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 -0.222 0.113
37 264788_at AT2G17880 DJC24, DNA J protein C24 -0.185 0.033
38 259088_at AT3G04970 [DHHC-type zinc finger family protein] -0.171 -0.051
39 259358_at AT1G13250 GATL3, galacturonosyltransferase-like 3 -0.170 0.151
40 253871_at AT4G27440 PORB, protochlorophyllide oxidoreductase B -0.159 0.143
41 254634_at AT4G18650 [transcription factor-related] -0.159 0.044
42 262248_at AT1G48370 YSL8, YELLOW STRIPE like 8 -0.156 -0.004
43 250177_at AT5G14420 RGLG2, RING domain ligase2 -0.154 0.066
44 249753_at AT5G24610 unknown -0.149 0.193
45 253743_at AT4G28940 [Phosphorylase superfamily protein] -0.149 -0.024
46 264889_at AT1G23050 hydroxyproline-rich glycoprotein family protein -0.142 0.089
47 249651_at AT5G37020 ARF8, auxin response factor 8, ATARF8 -0.139 0.068
48 248408_at AT5G51520 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.138 0.053
49 250857_at AT5G04790 unknown -0.138 0.137
50 245602_at AT4G14270 unknown -0.137 0.107
51 265987_at AT2G24240 [BTB/POZ domain with WD40/YVTN repeat-like protein] -0.132 -0.021
52 248502_at AT5G50450 [HCP-like superfamily protein with MYND-type zinc finger] -0.132 0.241
53 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.125 0.091
54 257305_at AT3G30250 unknown -0.123 0.027
55 255899_at AT1G17970 [RING/U-box superfamily protein] -0.120 -0.154
56 250751_at AT5G05890 [UDP-Glycosyltransferase superfamily protein] -0.117 0.052
57 247087_at AT5G66330 [Leucine-rich repeat (LRR) family protein] -0.113 -0.024
58 266374_at AT2G14640 [gypsy-like retrotransposon family, has a 2.5e-119 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] -0.111 0.031
59 250616_at AT5G07280 EMS1, EXCESS MICROSPOROCYTES1, EXS, EXTRA SPOROGENOUS CELLS -0.110 -0.044
60 266425_at AT2G41300 SSL1, strictosidine synthase-like 1 -0.107 -0.236
61 250382_at AT5G11580 [Regulator of chromosome condensation (RCC1) family protein] -0.106 0.091
62 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 -0.103 -0.116
63 257236_at AT3G15095 HCF243, high chlorophyll fluorescence 243 -0.102 0.049
64 256456_at AT1G75180 [Erythronate-4-phosphate dehydrogenase family protein] -0.100 0.116
65 246324_at AT1G16610 AtSR45, RNPS1, SR45, arginine/serine-rich 45 -0.097 0.051
66 261226_at AT1G20190 ATEXP11, ATEXPA11, expansin 11, ATHEXP ALPHA 1.14, EXP11, EXPANSIN 11, EXPA11, expansin 11 -0.097 -0.096
67 245499_at AT4G16480 ATINT4, INT4, inositol transporter 4 -0.096 0.172