4.0:Information of module
rsa1 salt 0 h
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 9.980e-05
GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 9.980e-05
GO:0032958 inositol phosphate biosynthetic process BP 1.225e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 1.110e-41
GO:0015706 nitrate transport BP 3.526e-41
GO:0015698 inorganic anion transport BP 3.094e-40
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rsa1 salt 0 h		 Log2 signal ratio
Leafminer damaged seedlings
1 266503_at AT2G47780 [Rubber elongation factor protein (REF)] 0.588 0.253
2 247718_at AT5G59310 LTP4, lipid transfer protein 4 0.530 0.287
3 253904_at AT4G27140 AT2S1, SESA1, seed storage albumin 1 0.497 0.088
4 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.390 0.224
5 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 0.380 -0.094
6 262001_at AT1G33790 [jacalin lectin family protein] 0.361 0.053
7 263061_at AT2G18190 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.352 -0.011
8 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.350 0.213
9 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.348 -0.292
10 247717_at AT5G59320 LTP3, lipid transfer protein 3 0.323 0.726
11 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.315 0.201
12 249039_at AT5G44310 [Late embryogenesis abundant protein (LEA) family protein] 0.312 -0.023
13 245422_at AT4G17470 [alpha/beta-Hydrolases superfamily protein] 0.309 0.872
14 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 0.299 -0.058
15 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] 0.295 0.065
16 254090_at AT4G25010 AtSWEET14, SWEET14 0.292 0.002
17 248467_at AT5G50800 AtSWEET13, SWEET13 0.291 -0.281
18 254814_at AT4G12340 [copper ion binding] 0.284 0.028
19 262357_at AT1G73040 [Mannose-binding lectin superfamily protein] 0.279 -0.121
20 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 0.273 1.222
21 249917_at AT5G22460 [alpha/beta-Hydrolases superfamily protein] 0.272 -0.671
22 262347_at AT1G64110 DAA1, DUO1-activated ATPase 1 0.268 -0.013
23 255111_at AT4G08780 [Peroxidase superfamily protein] 0.264 0.140
24 252316_at AT3G48700 ATCXE13, carboxyesterase 13, CXE13, carboxyesterase 13 0.264 0.029
25 257481_at AT1G08430 ALMT1, aluminum-activated malate transporter 1, ATALMT1, ARABIDOPSIS THALIANA ALUMINUM-ACTIVATED MALATE TRANSPORTER 1 0.258 -0.019
26 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.256 -0.030
27 266965_at AT2G39510 UMAMIT14, Usually multiple acids move in and out Transporters 14 0.255 0.015
28 250868_at AT5G03860 MLS, malate synthase 0.250 0.016
29 251065_at AT5G01870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.248 -0.008
30 253017_at AT4G37970 ATCAD6, CAD6, cinnamyl alcohol dehydrogenase 6 0.247 0.143
31 266738_at AT2G47010 unknown 0.244 -0.079
32 256349_at AT1G54890 [Late embryogenesis abundant (LEA) protein-related] 0.242 0.535
33 262373_at AT1G73120 unknown 0.235 -0.043
34 255443_at AT4G02700 SULTR3;2, sulfate transporter 3;2 0.234 -0.016
35 266727_at AT2G03150 emb1579, embryo defective 1579 0.220 -0.146
36 257947_at AT3G21720 ICL, isocitrate lyase 0.220 -0.037
37 261191_at AT1G32900 GBSS1, granule bound starch synthase 1 0.218 -0.235
38 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.215 0.108
39 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 0.213 -0.543
40 262580_at AT1G15330 [Cystathionine beta-synthase (CBS) protein] 0.207 0.014
41 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.205 0.076
42 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] 0.205 -0.434
43 252137_at AT3G50980 XERO1, dehydrin xero 1 0.203 0.097
44 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.197 0.655
45 257555_at AT3G24780 [Uncharacterised conserved protein UCP015417, vWA] 0.197 -0.098
46 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 0.194 0.797
47 254931_at AT4G11460 CRK30, cysteine-rich RLK (RECEPTOR-like protein kinase) 30 0.194 -0.270
48 260097_at AT1G73220 AtOCT1, organic cation/carnitine transporter1, OCT1, organic cation/carnitine transporter1 0.192 -0.016
49 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 0.191 0.413
50 254200_at AT4G24110 unknown 0.190 0.395
51 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 0.190 0.003
52 245528_at AT4G15530 PPDK, pyruvate orthophosphate dikinase 0.189 -0.149
53 259133_at AT3G05400 [Major facilitator superfamily protein] 0.187 -0.065
54 256852_at AT3G18610 ATNUC-L2, nucleolin like 2, NUC-L2, nucleolin like 2, PARLL1, PARALLEL1-LIKE 1 0.181 0.087
55 259952_at AT1G71400 AtRLP12, receptor like protein 12, RLP12, receptor like protein 12 0.180 0.164
56 246299_at AT3G51810 AT3, ATEM1, ARABIDOPSIS THALIANA LATE EMBRYOGENESIS ABUNDANT 1, EM1, LATE EMBRYOGENESIS ABUNDANT 1, GEA1, GUANINE NUCLEOTIDE EXCHANGE FACTOR FOR ADP RIBOSYLATION FACTORS 1 0.178 0.042
57 260296_at AT1G63750 [Disease resistance protein (TIR-NBS-LRR class) family] 0.178 0.175
58 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) 0.175 0.942
59 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.174 1.085
60 265672_at AT2G31980 AtCYS2, PHYTOCYSTATIN 2, CYS2, PHYTOCYSTATIN 2 0.174 0.140
61 255360_at AT4G03960 AtPFA-DSP4, PFA-DSP4, plant and fungi atypical dual-specificity phosphatase 4 0.172 0.007
62 247180_at AT5G65350 HTR11, histone 3 11 0.170 -0.114
63 248777_at AT5G47920 unknown 0.168 -0.068
64 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.167 0.324
65 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.165 0.082
66 251293_at AT3G61930 unknown 0.164 0.635
67 252629_at AT3G44970 [Cytochrome P450 superfamily protein] 0.163 -0.017
68 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.162 0.778
69 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 0.158 0.052
70 258590_at AT3G04280 ARR22, response regulator 22, RR22, response regulator 22 0.155 -0.040
71 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.155 0.717
72 258923_at AT3G10450 SCPL7, serine carboxypeptidase-like 7 0.154 -0.027
73 248197_at AT5G54190 PORA, protochlorophyllide oxidoreductase A 0.153 0.150
74 253998_at AT4G26010 [Peroxidase superfamily protein] 0.152 0.004
75 253939_at AT4G26930 AtMYB97, myb domain protein 97, MYB97, myb domain protein 97 0.149 0.006
76 264937_at AT1G61130 SCPL32, serine carboxypeptidase-like 32 0.148 -0.028
77 266540_at AT2G35310 [Transcriptional factor B3 family protein] 0.148 0.046
78 260298_at AT1G80320 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.147 0.013
79 250702_at AT5G06730 [Peroxidase superfamily protein] 0.147 0.111
80 249004_at AT5G44570 unknown 0.146 0.189
81 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.146 -0.175
82 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 0.144 0.384
83 264565_at AT1G05280 unknown 0.143 0.089
84 259033_at AT3G09405 [Pectinacetylesterase family protein] 0.142 0.496
85 247477_at AT5G62340 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.610 0.006
86 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 -0.524 0.931
87 262897_at AT1G59840 CCB4, cofactor assembly of complex C -0.515 -0.196
88 255160_at AT4G07820 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.483 0.098
89 245267_at AT4G14060 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.461 -0.022
90 252934_at AT4G39120 HISN7, HISTIDINE BIOSYNTHESIS 7, IMPL2, myo-inositol monophosphatase like 2 -0.459 -0.221
91 249097_at AT5G43520 [Cysteine/Histidine-rich C1 domain family protein] -0.426 -0.049
92 247476_at AT5G62330 unknown -0.424 -0.068
93 266784_at AT2G28960 [Leucine-rich repeat protein kinase family protein] -0.423 0.013
94 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 -0.421 0.544
95 249205_at AT5G42600 MRN1, marneral synthase 1 -0.409 -0.003
96 267457_at AT2G33790 AGP30, arabinogalactan protein 30, ATAGP30 -0.396 -0.009
97 255814_at AT1G19900 [glyoxal oxidase-related protein] -0.395 -0.012
98 249686_at AT5G36140 CYP716A2, cytochrome P450, family 716, subfamily A, polypeptide 2 -0.391 -0.009
99 249814_at AT5G23840 [MD-2-related lipid recognition domain-containing protein] -0.388 0.086
100 247685_at AT5G59680 [Leucine-rich repeat protein kinase family protein] -0.384 -0.156
101 245556_at AT4G15400 ABS1, ABNORMAL SHOOT 1, BIA1, BRASSINOSTEROID INACTIVATOR1 -0.367 0.014
102 267385_at AT2G44380 [Cysteine/Histidine-rich C1 domain family protein] -0.360 0.229
103 246196_at AT4G37090 unknown -0.348 0.055
104 254828_at AT4G12550 AIR1, Auxin-Induced in Root cultures 1 -0.331 0.175
105 262066_at AT1G79950 [RAD3-like DNA-binding helicase protein] -0.330 -0.027
106 251832_at AT3G55150 ATEXO70H1, exocyst subunit exo70 family protein H1, EXO70H1, exocyst subunit exo70 family protein H1 -0.326 0.012
107 245209_at AT5G12340 unknown -0.323 1.171
108 246888_at AT5G26270 unknown -0.321 0.273
109 256774_at AT3G13760 [Cysteine/Histidine-rich C1 domain family protein] -0.317 0.016
110 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.313 0.325
111 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 -0.303 0.444
112 266712_at AT2G46750 AtGulLO2, GulLO2, L -gulono-1,4-lactone ( L -GulL) oxidase 2 -0.303 0.064
113 256527_at AT1G66100 [Plant thionin] -0.303 0.238
114 259573_at AT1G20390 [gypsy-like retrotransposon family, has a 1.5e-251 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] -0.301 -0.383
115 259252_at AT3G07610 IBM1, increase in bonsai methylation 1 -0.297 -0.044
116 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 -0.287 -0.190
117 248298_at AT5G53110 [RING/U-box superfamily protein] -0.284 0.404
118 252568_at AT3G45410 LecRK-I.3, L-type lectin receptor kinase I.3 -0.283 0.075
119 262446_at AT1G49310 unknown -0.282 0.001
120 246412_at AT5G17530 [phosphoglucosamine mutase family protein] -0.278 -0.037
121 259481_at AT1G18970 GLP4, germin-like protein 4 -0.278 -0.007
122 253454_at AT4G31875 unknown -0.275 -0.148
123 246197_at AT4G37010 CEN2, centrin 2 -0.274 0.491
124 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 -0.272 0.780
125 260664_at AT1G19510 ATRL5, RAD-like 5, RL5, RAD-like 5, RSM4, RADIALIS-LIKE SANT/MYB 4 -0.263 -0.111
126 255266_at AT4G05200 CRK25, cysteine-rich RLK (RECEPTOR-like protein kinase) 25 -0.262 0.001
127 260403_at AT1G69810 ATWRKY36, WRKY36, WRKY DNA-binding protein 36 -0.260 0.158
128 248790_at AT5G47450 ATTIP2;3, ARABIDOPSIS THALIANA TONOPLAST INTRINSIC PROTEIN 2;3, DELTA-TIP3, DELTA-TONOPLAST INTRINSIC PROTEIN 3, TIP2;3, tonoplast intrinsic protein 2;3 -0.260 0.050
129 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 -0.258 0.610
130 267226_at AT2G44010 unknown -0.257 0.209
131 249882_at AT5G22890 STOP2, sensitive to proton rhizotoxicity 2 -0.254 0.003
132 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.252 -0.071
133 262301_at AT1G70880 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.252 -0.028
134 246375_at AT1G51830 [Leucine-rich repeat protein kinase family protein] -0.249 0.017
135 264716_at AT1G70170 MMP, matrix metalloproteinase -0.249 0.224
136 261878_at AT1G50560 CYP705A25, cytochrome P450, family 705, subfamily A, polypeptide 25 -0.246 0.039
137 263168_at AT1G03020 [Thioredoxin superfamily protein] -0.244 -0.043
138 246933_at AT5G25160 ZFP3, zinc finger protein 3 -0.243 -0.063
139 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] -0.241 0.685
140 251176_at AT3G63380 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.239 0.676
141 247570_at AT5G61250 AtGUS1, glucuronidase 1, GUS1, glucuronidase 1 -0.239 -0.012
142 265049_at AT1G52060 [Mannose-binding lectin superfamily protein] -0.237 -0.043
143 266307_at AT2G27000 CYP705A8, cytochrome P450, family 705, subfamily A, polypeptide 8 -0.236 -0.015
144 266787_at AT2G28990 [Leucine-rich repeat protein kinase family protein] -0.236 -0.020
145 261956_at AT1G64590 [NAD(P)-binding Rossmann-fold superfamily protein] -0.235 -0.088
146 255528_at AT4G02090 unknown -0.233 0.063
147 250666_at AT5G07100 WRKY26, WRKY DNA-binding protein 26 -0.233 0.793
148 266995_at AT2G34500 CYP710A1, cytochrome P450, family 710, subfamily A, polypeptide 1 -0.232 0.496
149 259841_at AT1G52200 [PLAC8 family protein] -0.230 0.614
150 265543_at AT2G28270 [Cysteine/Histidine-rich C1 domain family protein] -0.228 -0.014
151 255436_at AT4G03150 unknown -0.226 -0.236
152 246366_at AT1G51850 [Leucine-rich repeat protein kinase family protein] -0.221 0.173
153 245504_at AT4G15660 [Thioredoxin superfamily protein] -0.220 0.668
154 266191_at AT2G39040 [Peroxidase superfamily protein] -0.220 0.082
155 265852_at AT2G42350 [RING/U-box superfamily protein] -0.219 0.356
156 246229_at AT4G37160 sks15, SKU5 similar 15 -0.217 0.018
157 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 -0.214 0.186
158 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] -0.214 0.650
159 264757_at AT1G61360 [S-locus lectin protein kinase family protein] -0.214 0.434
160 254879_at AT4G11670 unknown -0.213 0.016
161 253193_at AT4G35380 [SEC7-like guanine nucleotide exchange family protein] -0.211 0.018
162 256875_at AT3G26330 CYP71B37, cytochrome P450, family 71, subfamily B, polypeptide 37 -0.210 0.381
163 267418_at AT2G35000 ATL9, Arabidopsis toxicos en levadura 9 -0.208 0.194
164 266353_at AT2G01520 MLP328, MLP-like protein 328, ZCE1, (Zusammen-CA)-enhanced 1 -0.208 -0.036
165 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] -0.208 0.238
166 266975_at AT2G39380 ATEXO70H2, exocyst subunit exo70 family protein H2, EXO70H2, exocyst subunit exo70 family protein H2 -0.206 0.345
167 266165_at AT2G28190 CSD2, copper/zinc superoxide dismutase 2, CZSOD2, COPPER/ZINC SUPEROXIDE DISMUTASE 2 -0.205 0.090