4.0:Information of module
Tsu -Fe 48h Roots
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1990267 response to transition metal nanoparticl... BP 1.111e-07
GO:0071732 cellular response to nitric oxide BP 5.747e-07
GO:0071281 cellular response to iron ion BP 1.039e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901615 organic hydroxy compound metabolic proce... BP 1.045e-04
GO:0043067 regulation of programmed cell death BP 1.082e-04
GO:0008219 cell death BP 1.110e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Tsu -Fe 48h Roots		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 254534_at AT4G19680 ATIRT2, IRON REGULATED TRANSPORTER 2, IRT2, iron regulated transporter 2 0.911 -0.713
2 246998_at AT5G67370 CGLD27, CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27 0.906 0.553
3 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 0.852 -0.945
4 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 0.843 0.465
5 251293_at AT3G61930 unknown 0.612 -1.108
6 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 0.574 -0.774
7 249535_at AT5G38820 [Transmembrane amino acid transporter family protein] 0.571 0.573
8 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.562 -0.665
9 251012_at AT5G02580 unknown 0.558 -0.041
10 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.526 -0.379
11 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 0.523 -1.181
12 252364_at AT3G48450 [RPM1-interacting protein 4 (RIN4) family protein] 0.511 -0.365
13 253215_at AT4G34950 [Major facilitator superfamily protein] 0.497 0.067
14 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.489 -0.176
15 245296_at AT4G16370 oligopeptide transporter 0.454 -0.048
16 259228_at AT3G07720 [Galactose oxidase/kelch repeat superfamily protein] 0.437 0.752
17 250828_at AT5G05250 unknown 0.416 -0.805
18 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 0.399 -0.379
19 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.394 -0.868
20 247264_at AT5G64530 ANAC104, Arabidopsis NAC domain containing protein 104, XND1, xylem NAC domain 1 0.344 -0.673
21 256847_at AT3G27950 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.325 -0.703
22 258103_at AT3G23630 ATIPT7, ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 7, IPT7, isopentenyltransferase 7 0.306 -1.569
23 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.297 -0.882
24 246847_at AT5G26820 ATIREG3, iron-regulated protein 3, IREG3, IRON REGULATED 3, IREG3, iron-regulated protein 3, MAR1, MULTIPLE ANTIBIOTIC RESISTANCE 1, RTS3 0.290 0.210
25 262905_at AT1G59730 ATH7, thioredoxin H-type 7, TH7, thioredoxin H-type 7 0.288 -0.496
26 246370_at AT1G51920 unknown 0.288 -1.081
27 248090_at AT5G55090 MAPKKK15, mitogen-activated protein kinase kinase kinase 15 0.286 -1.064
28 245349_at AT4G16690 ATMES16, ARABIDOPSIS THALIANA METHYL ESTERASE 16, MES16, methyl esterase 16 0.281 0.369
29 250248_at AT5G13740 ZIF1, zinc induced facilitator 1 0.267 0.501
30 247001_at AT5G67330 ATNRAMP4, ARABIDOPSIS THALIANA NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN 4, NRAMP4, natural resistance associated macrophage protein 4 0.256 -0.104
31 254724_at AT4G13630 unknown 0.253 0.819
32 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 0.253 0.319
33 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 0.243 -0.356
34 260581_at AT2G47190 ATMYB2, MYB DOMAIN PROTEIN 2, MYB2, myb domain protein 2 0.243 0.067
35 251315_at AT3G61410 unknown 0.237 -0.916
36 261065_at AT1G07500 SMR5, SIAMESE-RELATED 5 0.236 0.422
37 256221_at AT1G56300 [Chaperone DnaJ-domain superfamily protein] 0.230 -0.130
38 258289_at AT3G23450 unknown 0.228 -0.228
39 253413_at AT4G33020 ATZIP9, ZIP9 0.218 -0.447
40 255568_at AT4G01250 AtWRKY22, WRKY22 0.218 -0.076
41 252663_at AT3G44070 [Glycosyl hydrolase family 35 protein] -0.468 0.598
42 245967_at AT5G19800 [hydroxyproline-rich glycoprotein family protein] -0.434 -0.743
43 255138_at AT4G08380 [Proline-rich extensin-like family protein] -0.358 -1.396
44 262458_at AT1G11280 [S-locus lectin protein kinase family protein] -0.357 0.265
45 249120_at AT5G43750 NDH18, NAD(P)H dehydrogenase 18, PnsB5, Photosynthetic NDH subcomplex B 5 -0.332 -0.194
46 259261_at AT3G11390 [Cysteine/Histidine-rich C1 domain family protein] -0.302 0.094
47 249321_at AT5G40920 [pseudogene] -0.288 0.278
48 259943_at AT1G71480 [Nuclear transport factor 2 (NTF2) family protein] -0.286 0.761
49 263441_at AT2G28620 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.281 -0.375
50 259807_at AT1G47920 [RNI-like superfamily protein] -0.276 -0.065
51 264143_at AT1G79330 AMC6, ATMC5, metacaspase 5, ATMCP2b, metacaspase 2b, MC5, metacaspase 5, MCP2b, metacaspase 2b -0.263 -1.435
52 252766_at AT3G42820 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G35770.1)] -0.262 -0.330
53 262485_at AT1G21730 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.259 -0.461
54 264375_at AT2G25090 AtCIPK16, CIPK16, CBL-interacting protein kinase 16, SnRK3.18, SNF1-RELATED PROTEIN KINASE 3.18 -0.256 -1.064
55 263174_at AT1G54040 ESP, epithiospecifier protein, ESR, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY -0.254 0.865
56 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] -0.253 -0.248
57 248954_at AT5G45420 maMYB, membrane anchored MYB -0.253 0.184
58 267349_at AT2G40010 [Ribosomal protein L10 family protein] -0.251 1.031
59 252195_at AT3G50190 unknown -0.250 -0.225
60 263777_at AT2G46450 ATCNGC12, cyclic nucleotide-gated channel 12, CNGC12, cyclic nucleotide-gated channel 12 -0.246 0.156
61 264534_at AT1G55700 [Cysteine/Histidine-rich C1 domain family protein] -0.242 -0.399
62 257372_at AT2G43220 [Cysteine/Histidine-rich C1 domain family protein] -0.242 -0.003
63 255078_at AT4G09010 APX4, ascorbate peroxidase 4, TL29, thylakoid lumen 29 -0.238 0.630
64 259351_at AT3G05150 [Major facilitator superfamily protein] -0.234 -0.160
65 246815_at AT5G27220 [Frigida-like protein] -0.228 -0.360
66 262546_at AT1G31260 ZIP10, zinc transporter 10 precursor -0.228 -0.757
67 250379_at AT5G11590 TINY2, TINY2 -0.214 -0.624
68 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 -0.213 -0.653
69 246977_at AT5G24930 ATCOL4, BBX5, B-box domain protein 5, COL4, CONSTANS-like 4 -0.212 0.358
70 266521_at AT2G24020 [Uncharacterised BCR, YbaB family COG0718] -0.208 1.297
71 249917_at AT5G22460 [alpha/beta-Hydrolases superfamily protein] -0.207 0.318
72 255551_at AT4G01840 ATKCO5, ATTPK5, KCO5, Ca2+ activated outward rectifying K+ channel 5, TPK5 -0.201 -0.623
73 249773_at AT5G24140 SQP2, squalene monooxygenase 2 -0.201 -0.951
74 251934_at AT3G54070 [Ankyrin repeat family protein] -0.201 -0.577
75 264434_at AT1G10340 [Ankyrin repeat family protein] -0.199 -0.142
76 258147_at AT3G18070 BGLU43, beta glucosidase 43 -0.198 -0.947
77 254325_at AT4G22650 unknown -0.185 -0.960
78 254537_at AT4G19730 [Glycosyl hydrolase superfamily protein] -0.184 -0.511
79 263642_at AT2G04750 [Actin binding Calponin homology (CH) domain-containing protein] -0.184 -0.892