4.0:Information of module
Transgenic LEC2GR Seedling 1h Dex
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1901700 response to oxygen-containing compound BP 1.905e-27
GO:0010243 response to organonitrogen compound BP 3.516e-23
GO:0010200 response to chitin BP 7.017e-23
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0034284 response to monosaccharide BP 1.272e-09
GO:0009750 response to fructose BP 9.818e-09
GO:0009746 response to hexose BP 1.457e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Transgenic LEC2GR Seedling 1h Dex		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 1.458 0.054
2 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 1.098 -0.099
3 266246_at AT2G27690 CYP94C1, cytochrome P450, family 94, subfamily C, polypeptide 1 0.957 0.136
4 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 0.910 0.119
5 254574_at AT4G19430 unknown 0.822 -0.110
6 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.791 -0.170
7 258349_at AT3G17609 HYH, HY5-homolog 0.748 -0.053
8 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.742 0.235
9 253485_at AT4G31800 ATWRKY18, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18, WRKY18, WRKY DNA-binding protein 18 0.736 0.139
10 245041_at AT2G26530 AR781 0.733 -0.226
11 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 0.726 -0.108
12 246597_at AT5G14760 AO, L-aspartate oxidase, FIN4, FLAGELLIN-INSENSITIVE 4 0.716 0.109
13 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] 0.712 -0.076
14 259325_at AT3G05320 [O-fucosyltransferase family protein] 0.709 -0.145
15 245567_at AT4G14630 GLP9, germin-like protein 9 0.709 0.042
16 262801_at AT1G21010 unknown 0.701 0.045
17 250258_at AT5G13790 AGL15, AGAMOUS-like 15 0.697 -0.025
18 257644_at AT3G25780 AOC3, allene oxide cyclase 3 0.642 0.103
19 261662_at AT1G18350 ATMKK7, MAP kinase kinase 7, BUD1, BUSHY AND DWARF 1, MKK7, MAP kinase kinase 7, MKK7, MAP KINASE KINASE7 0.632 0.047
20 247933_at AT5G56980 unknown 0.630 0.032
21 266271_at AT2G29440 ATGSTU6, glutathione S-transferase tau 6, GST24, GLUTATHIONE S-TRANSFERASE 24, GSTU6, glutathione S-transferase tau 6 0.621 0.002
22 264389_at AT1G11960 [ERD (early-responsive to dehydration stress) family protein] 0.619 0.261
23 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.599 0.392
24 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 0.597 0.325
25 246293_at AT3G56710 SIB1, sigma factor binding protein 1 0.591 0.099
26 266321_at AT2G46660 CYP78A6, cytochrome P450, family 78, subfamily A, polypeptide 6, EOD3, enhancer of da1-1 0.584 -0.079
27 255403_at AT4G03400 DFL2, DWARF IN LIGHT 2, GH3-10 0.579 -0.010
28 258606_at AT3G02840 [ARM repeat superfamily protein] 0.579 -0.045
29 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 0.578 0.018
30 251028_at AT5G02230 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.577 -0.006
31 253830_at AT4G27652 unknown 0.569 -0.016
32 253880_at AT4G27590 [Heavy metal transport/detoxification superfamily protein ] 0.566 -0.057
33 264787_at AT2G17840 ERD7, EARLY-RESPONSIVE TO DEHYDRATION 7 0.566 -0.011
34 248889_at AT5G46230 unknown 0.562 -0.014
35 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.560 -0.067
36 251509_at AT3G59010 PME35, pectin methylesterase 35, PME61, pectin methylesterase 61 0.549 -0.005
37 252661_at AT3G44450 unknown 0.540 -0.013
38 264000_at AT2G22500 ATPUMP5, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, DIC1, DICARBOXYLATE CARRIER 1, UCP5, uncoupling protein 5 0.538 -0.185
39 263221_at AT1G30620 HSR8, HIGH SUGAR RESPONSE8, MUR4, MURUS 4, UXE1, UDP-D-XYLOSE 4-EPIMERASE 1 0.537 0.026
40 248286_at AT5G52870 MAKR5, MEMBRANE-ASSOCIATED KINASE REGULATOR 5 0.537 -0.423
41 265732_at AT2G01300 unknown 0.531 0.030
42 247582_at AT5G60760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.517 0.058
43 260528_at AT2G47260 ATWRKY23, WRKY DNA-BINDING PROTEIN 23, WRKY23, WRKY DNA-binding protein 23 0.507 0.015
44 267337_at AT2G39980 [HXXXD-type acyl-transferase family protein] 0.498 0.023
45 264091_at AT1G79110 BRG2, BOI-related gene 2 0.497 0.228
46 254667_at AT4G18280 [glycine-rich cell wall protein-related] 0.493 0.149
47 254562_at AT4G19230 CYP707A1, cytochrome P450, family 707, subfamily A, polypeptide 1 0.492 0.259
48 247177_at AT5G65300 unknown 0.491 -0.055
49 250098_at AT5G17350 unknown 0.489 -0.180
50 246495_at AT5G16200 [50S ribosomal protein-related] 0.489 0.290
51 261070_at AT1G07390 AtRLP1, receptor like protein 1, RLP1, receptor like protein 1 0.484 0.134
52 261247_at AT1G20070 unknown 0.482 -0.052
53 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.479 -0.096
54 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] 0.477 0.188
55 266316_at AT2G27080 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.477 -0.083
56 255591_at AT4G01630 ATEXP17, EXPANSIN 17, ATEXPA17, expansin A17, ATHEXP ALPHA 1.13, EXPA17, expansin A17 0.468 -0.017
57 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] 0.464 0.275
58 250892_at AT5G03760 ATCSLA09, ATCSLA9, CSLA09, CSLA9, CELLULOSE SYNTHASE LIKE A9, RAT4, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 0.457 -0.222
59 266536_at AT2G16900 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.456 -0.115
60 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.456 0.063
61 248400_at AT5G52020 [Integrase-type DNA-binding superfamily protein] 0.454 0.075
62 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 0.451 -0.055
63 257480_at AT1G15640 unknown 0.450 0.181
64 262887_at AT1G14780 [MAC/Perforin domain-containing protein] 0.440 -0.137
65 251336_at AT3G61190 BAP1, BON association protein 1 0.440 0.181
66 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.427 -0.160
67 248277_at AT5G52860 ABCG8, ATP-binding cassette G8 0.424 -0.089
68 245740_at AT1G44100 AAP5, amino acid permease 5 0.422 -0.001
69 265939_at AT2G19650 [Cysteine/Histidine-rich C1 domain family protein] 0.421 0.023
70 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B 0.416 0.017
71 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.412 -0.043
72 245677_at AT1G56660 unknown 0.410 -0.147
73 260387_at AT1G74100 ATSOT16, SULFOTRANSFERASE 16, ATST5A, ARABIDOPSIS SULFOTRANSFERASE 5A, CORI-7, CORONATINE INDUCED-7, SOT16, sulfotransferase 16 0.407 0.006
74 266882_at AT2G44670 unknown 0.398 0.028
75 260023_at AT1G30040 ATGA2OX2, gibberellin 2-oxidase, GA2OX2, gibberellin 2-oxidase, GA2OX2, GIBBERELLIN 2-OXIDASE 2 0.397 -0.092
76 264535_at AT1G55690 [Sec14p-like phosphatidylinositol transfer family protein] 0.395 0.108
77 253835_at AT4G27820 BGLU9, beta glucosidase 9 0.395 0.302
78 255595_at AT4G01700 [Chitinase family protein] 0.393 -0.051
79 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor 0.392 0.030
80 251653_at AT3G57130 BOP1, BLADE ON PETIOLE 1 0.392 0.002
81 261567_at AT1G33055 unknown -0.902 -0.054
82 264788_at AT2G17880 DJC24, DNA J protein C24 -0.892 -0.116
83 255822_at AT2G40610 ATEXP8, ATEXPA8, expansin A8, ATHEXP ALPHA 1.11, EXP8, EXPA8, expansin A8 -0.732 0.044
84 262986_at AT1G23390 [Kelch repeat-containing F-box family protein] -0.703 0.108
85 259996_at AT1G67910 unknown -0.633 -0.011
86 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 -0.604 -0.075
87 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 -0.584 -0.140
88 251169_at AT3G63210 MARD1, MEDIATOR OF ABA-REGULATED DORMANCY 1 -0.558 0.108
89 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 -0.555 -0.013
90 246275_at AT4G36540 BEE2, BR enhanced expression 2 -0.547 0.030
91 259854_at AT1G72200 [RING/U-box superfamily protein] -0.545 0.034
92 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 -0.539 -0.015
93 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 -0.528 -0.040
94 256332_at AT1G76890 AT-GT2, GT2 -0.512 -0.052
95 266016_at AT2G18670 [RING/U-box superfamily protein] -0.511 0.030
96 251039_at AT5G02020 SIS, Salt Induced Serine rich -0.506 -0.026
97 253806_at AT4G28270 ATRMA2, RMA2, RING membrane-anchor 2 -0.497 -0.152
98 259235_at AT3G11600 unknown -0.492 -0.062
99 261927_at AT1G22500 AtATL15, Arabidopsis thaliana Arabidopsis toxicos en levadura 15, ATL15, Arabidopsis toxicos en levadura 15 -0.481 0.119
100 266259_at AT2G27830 unknown -0.471 0.053
101 261395_at AT1G79700 WRI4, WRINKLED 4 -0.469 -0.051
102 253246_at AT4G34600 unknown -0.469 0.016
103 266635_at AT2G35470 unknown -0.468 0.184
104 255617_at AT4G01330 [Protein kinase superfamily protein] -0.460 -0.012
105 264240_at AT1G54820 [Protein kinase superfamily protein] -0.460 0.118
106 257946_at AT3G21710 unknown -0.459 -0.073
107 252081_at AT3G51910 AT-HSFA7A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, HSFA7A, heat shock transcription factor A7A -0.457 -0.078
108 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.455 0.249
109 254193_at AT4G23870 unknown -0.453 0.017
110 248969_at AT5G45310 unknown -0.452 0.019
111 263265_at AT2G38820 unknown -0.452 0.111
112 248050_at AT5G56100 [glycine-rich protein / oleosin] -0.451 -0.041
113 254919_at AT4G11360 RHA1B, RING-H2 finger A1B -0.449 0.225
114 250008_at AT5G18630 [alpha/beta-Hydrolases superfamily protein] -0.448 -0.043
115 259417_at AT1G02340 FBI1, HFR1, LONG HYPOCOTYL IN FAR-RED, REP1, REDUCED PHYTOCHROME SIGNALING 1, RSF1, REDUCED SENSITIVITY TO FAR-RED LIGHT 1 -0.440 -0.141
116 250189_at AT5G14410 unknown -0.435 -0.035
117 267477_at AT2G02710 PLP, PAS/LOV PROTEIN, PLPA, PAS/LOV PROTEIN A, PLPB, PAS/LOV protein B, PLPC, PAS/LOV PROTEIN C -0.421 0.192
118 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.419 -0.069
119 250155_at AT5G15160 BHLH134, BASIC HELIX-LOOP-HELIX PROTEIN 134, BNQ2, BANQUO 2 -0.415 -0.015
120 246028_at AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein -0.410 -0.107
121 248839_at AT5G46690 bHLH071, beta HLH protein 71 -0.404 -0.034
122 255381_at AT4G03510 ATRMA1, RMA1, RING membrane-anchor 1 -0.402 0.118
123 259541_at AT1G20650 ASG5, ALTERED SEED GERMINATION 5 -0.397 -0.008
124 263333_at AT2G03890 ATPI4K GAMMA 7, phosphoinositide 4-kinase gamma 7, PI4K GAMMA 7, phosphoinositide 4-kinase gamma 7, UBDK GAMMA 7, UBIQUITIN-LIKE DOMAIN KINASE GAMMA 7 -0.395 -0.146
125 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 -0.393 -0.073
126 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 -0.389 -0.178
127 249923_at AT5G19120 [Eukaryotic aspartyl protease family protein] -0.388 -0.100
128 265102_at AT1G30870 [Peroxidase superfamily protein] -0.387 0.034
129 246244_at AT4G37250 [Leucine-rich repeat protein kinase family protein] -0.384 0.151
130 248795_at AT5G47390 MYBH, MYB hypocotyl elongation-related -0.382 -0.007
131 259017_at AT3G07310 unknown -0.377 0.079
132 257294_at AT3G15570 [Phototropic-responsive NPH3 family protein] -0.375 0.013
133 245984_at AT5G13090 unknown -0.375 0.075
134 265265_at AT2G42900 [Plant basic secretory protein (BSP) family protein] -0.374 0.236
135 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 -0.373 -0.082
136 246917_at AT5G25280 [serine-rich protein-related] -0.369 -0.022
137 264040_at AT2G03730 ACR5, ACT domain repeat 5 -0.366 0.021
138 245602_at AT4G14270 unknown -0.364 0.058
139 262286_at AT1G68585 unknown -0.361 -0.001
140 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 -0.357 -0.025
141 254564_at AT4G19170 CCD4, carotenoid cleavage dioxygenase 4, NCED4, nine-cis-epoxycarotenoid dioxygenase 4 -0.352 -0.285
142 258225_at AT3G15630 unknown -0.352 0.105
143 246975_at AT5G24890 unknown -0.351 -0.053
144 253278_at AT4G34220 [Leucine-rich repeat protein kinase family protein] -0.350 0.202
145 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 -0.346 -0.166
146 263118_at AT1G03090 MCCA -0.345 0.117
147 265457_at AT2G46550 unknown -0.344 0.057
148 255851_at AT1G67040 TRM22, TON1 Recruiting Motif 22 -0.336 -0.012
149 257990_at AT3G19860 bHLH121, basic Helix-Loop-Helix 121 -0.334 -0.021
150 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] -0.331 0.085
151 247170_at AT5G65530 [Protein kinase superfamily protein] -0.328 0.005
152 263827_at AT2G40420 [Transmembrane amino acid transporter family protein] -0.327 0.303
153 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.326 0.135
154 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.323 0.044
155 266156_at AT2G28110 FRA8, FRAGILE FIBER 8, IRX7, IRREGULAR XYLEM 7 -0.323 0.060
156 258350_at AT3G17510 CIPK1, CBL-interacting protein kinase 1, SnRK3.16, SNF1-RELATED PROTEIN KINASE 3.16 -0.322 0.014
157 263799_at AT2G24550 unknown -0.322 0.030
158 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 -0.317 0.008
159 248759_at AT5G47610 [RING/U-box superfamily protein] -0.314 0.046