4.0:Information of module
pmr5
In comparison with PNO8 12 h  help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009933 meristem structural organization BP 1.912e-04
GO:0048532 anatomical structure arrangement BP 2.133e-04
GO:0006259 DNA metabolic process BP 3.203e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006900 membrane budding BP 1.624e-03
GO:0016050 vesicle organization BP 2.607e-03
GO:0009631 cold acclimation BP 5.502e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
pmr5		 Log2 signal ratio
PNO8 12 h
1 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.462 -0.066
2 260364_at AT1G70560 CKRC1, cytokinin induced root curling 1, SAV3, SHADE AVOIDANCE 3, TAA1, tryptophan aminotransferase of Arabidopsis 1, WEI8, WEAK ETHYLENE INSENSITIVE 8 0.301 -0.006
3 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.287 0.069
4 245143_at AT2G45450 ZPR1, LITTLE ZIPPER 1 0.223 0.018
5 267460_at AT2G33810 SPL3, squamosa promoter binding protein-like 3 0.207 -0.002
6 247812_at AT5G58390 [Peroxidase superfamily protein] 0.199 0.024
7 256743_at AT3G29370 P1R3, P1R3 0.194 0.121
8 258895_at AT3G05600 [alpha/beta-Hydrolases superfamily protein] 0.181 -0.042
9 267555_at AT2G32765 ATSUMO5, SUM5, SUMO 5, SUMO5, small ubiquitinrelated modifier 5 0.153 -0.040
10 251050_at AT5G02440 unknown 0.148 0.020
11 266379_at AT2G14690 [Glycosyl hydrolase superfamily protein] 0.148 -0.003
12 248709_at AT5G48470 PRDA1, PEP-Related Development Arrested 1 0.146 -0.150
13 251282_at AT3G61630 CRF6, cytokinin response factor 6 0.146 0.010
14 263653_at AT1G04310 ERS2, ethylene response sensor 2 0.144 0.055
15 266139_at AT2G28085 SAUR42, SMALL AUXIN UPREGULATED RNA 42 0.142 -0.019
16 261800_at AT1G30490 ATHB9, PHV, PHAVOLUTA 0.141 -0.027
17 258389_at AT3G15390 SDE5, silencing defective 5 0.135 -0.048
18 257794_at AT3G27050 unknown -0.523 0.004
19 245736_at AT1G73330 ATDR4, drought-repressed 4, DR4, drought-repressed 4 -0.288 0.007
20 255333_at AT4G04410 [copia-like retrotransposon family, has a 1.7e-176 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.243 -0.029
21 264157_at AT1G65310 ATXTH17, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, XTH17, xyloglucan endotransglucosylase/hydrolase 17 -0.239 -0.056
22 252629_at AT3G44970 [Cytochrome P450 superfamily protein] -0.220 -0.018
23 260471_at AT1G11070 unknown -0.188 -0.014
24 259169_at AT3G03520 NPC3, non-specific phospholipase C3 -0.180 -0.007
25 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.152 -0.171
26 255756_at AT1G19940 AtGH9B5, glycosyl hydrolase 9B5, GH9B5, glycosyl hydrolase 9B5 -0.151 -0.015
27 266409_at AT2G38510 [MATE efflux family protein] -0.148 -0.012
28 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] -0.147 -0.013
29 263497_at AT2G42540 COR15, COR15A, cold-regulated 15a -0.146 0.007
30 257465_at AT1G13040 [Pentatricopeptide repeat (PPR-like) superfamily protein] -0.145 -0.050
31 262231_at AT1G68740 PHO1;H1 -0.141 0.011
32 265832_at AT2G14450 unknown -0.137 0.027
33 260458_at AT1G68250 unknown -0.134 0.043