4.0:Information of module
cpr5 sim smr1
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1903047 mitotic cell cycle process BP 1.018e-18
GO:0000910 cytokinesis BP 1.141e-15
GO:0061640 cytoskeleton-dependent cytokinesis BP 1.150e-15
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 8.291e-20
GO:0010243 response to organonitrogen compound BP 7.394e-19
GO:1901700 response to oxygen-containing compound BP 1.837e-18
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
cpr5 sim smr1		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.437 0.296
2 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 0.424 -0.027
3 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.388 0.008
4 253156_at AT4G35730 [Regulator of Vps4 activity in the MVB pathway protein] 0.349 -0.092
5 267636_at AT2G42110 unknown 0.334 0.061
6 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 0.320 0.023
7 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.319 0.082
8 251750_at AT3G55710 [UDP-Glycosyltransferase superfamily protein] 0.314 -0.047
9 245341_at AT4G16447 unknown 0.310 0.171
10 263031_at AT1G24070 ATCSLA10, cellulose synthase-like A10, CSLA10, CELLULOSE SYNTHASE LIKE A10, CSLA10, cellulose synthase-like A10 0.307 0.036
11 252740_at AT3G43270 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.302 -0.141
12 258100_at AT3G23550 [MATE efflux family protein] 0.295 -0.249
13 256062_at AT1G07090 LSH6, LIGHT SENSITIVE HYPOCOTYLS 6 0.295 0.112
14 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 0.295 0.018
15 267288_at AT2G23680 [Cold acclimation protein WCOR413 family] 0.286 -0.037
16 256050_at AT1G07000 ATEXO70B2, exocyst subunit exo70 family protein B2, EXO70B2, exocyst subunit exo70 family protein B2 0.285 0.070
17 265171_at AT1G23790 unknown 0.284 -0.052
18 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 0.280 0.025
19 249809_at AT5G23910 [ATP binding microtubule motor family protein] 0.271 -0.102
20 258859_at AT3G02120 [hydroxyproline-rich glycoprotein family protein] 0.267 0.010
21 262260_at AT1G70850 MLP34, MLP-like protein 34 0.265 0.065
22 258791_at AT3G04720 AtPR4, HEL, HEVEIN-LIKE, PR-4, PR4, pathogenesis-related 4 0.262 0.081
23 267388_at AT2G44450 BGLU15, beta glucosidase 15 0.258 -0.178
24 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.258 -0.237
25 247039_at AT5G67270 ATEB1C, MICROTUBULE END BINDING PROTEIN 1, ATEB1H1, ATEB1-HOMOLOG1, EB1C, end binding protein 1C 0.256 0.068
26 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 0.253 -0.060
27 266993_at AT2G39210 [Major facilitator superfamily protein] 0.251 -0.060
28 259560_at AT1G21270 WAK2, wall-associated kinase 2 0.250 -0.002
29 259912_at AT1G72670 iqd8, IQ-domain 8 0.249 0.062
30 267205_at AT2G30820 unknown 0.247 -0.273
31 263207_at AT1G10550 XET, XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33, XTH33, xyloglucan:xyloglucosyl transferase 33 0.246 -0.061
32 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] 0.242 -0.076
33 246557_at AT5G15510 [TPX2 (targeting protein for Xklp2) protein family] 0.241 -0.012
34 255460_at AT4G02800 unknown 0.236 -0.145
35 251718_at AT3G56100 IMK3, MRLK, meristematic receptor-like kinase 0.234 0.010
36 250386_at AT5G11510 AtMYB3R4, myb domain protein 3R4, MYB3R-4, myb domain protein 3r-4 0.233 -0.061
37 252781_at AT3G42950 [Pectin lyase-like superfamily protein] 0.232 -0.245
38 264832_at AT1G03660 [Ankyrin-repeat containing protein] 0.232 0.409
39 250267_at AT5G12930 unknown 0.232 0.037
40 262408_at AT1G34750 [Protein phosphatase 2C family protein] 0.230 -0.037
41 259232_at AT3G11420 unknown 0.229 0.040
42 248889_at AT5G46230 unknown 0.226 -0.014
43 261481_at AT1G14260 [RING/FYVE/PHD zinc finger superfamily protein] 0.225 -0.253
44 253148_at AT4G35620 CYCB2;2, Cyclin B2;2 0.225 0.111
45 261085_at AT1G17480 IQD7, IQ-domain 7 0.225 0.111
46 256577_at AT3G28220 [TRAF-like family protein] 0.225 0.009
47 248055_at AT5G55830 LecRK-S.7, L-type lectin receptor kinase S.7 0.223 -0.058
48 262507_at AT1G11330 [S-locus lectin protein kinase family protein] 0.222 0.016
49 262711_at AT1G16500 unknown 0.222 0.113
50 255597_at AT4G01730 [DHHC-type zinc finger family protein] 0.221 0.141
51 248456_at AT5G51380 [RNI-like superfamily protein] 0.221 -0.029
52 245052_at AT2G26440 PME12, pectin methylesterase 12 0.221 -0.034
53 264763_at AT1G61450 unknown 0.220 0.040
54 255410_at AT4G03100 [Rho GTPase activating protein with PAK-box/P21-Rho-binding domain] 0.219 0.043
55 252993_at AT4G38540 [FAD/NAD(P)-binding oxidoreductase family protein] 0.218 -0.077
56 259609_at AT1G52410 AtTSA1, TSA1, TSK-associating protein 1 0.216 0.005
57 252265_at AT3G49620 DIN11, DARK INDUCIBLE 11 0.214 0.051
58 263607_at AT2G16270 unknown 0.214 0.004
59 250764_at AT5G05960 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.214 0.096
60 251621_at AT3G57700 [Protein kinase superfamily protein] 0.213 0.074
61 266655_at AT2G25880 AtAUR2, ataurora2, AUR2, ataurora2 0.212 0.107
62 248062_at AT5G55450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.212 0.064
63 253779_at AT4G28490 HAE, HAESA, RLK5, RECEPTOR-LIKE PROTEIN KINASE 5 0.211 0.090
64 247134_at AT5G66230 [Chalcone-flavanone isomerase family protein] 0.210 0.171
65 249644_at AT5G37010 unknown 0.209 0.036
66 262802_at AT1G20930 CDKB2;2, cyclin-dependent kinase B2;2 0.209 0.006
67 250844_at AT5G04470 SIM, SIAMESE 0.208 0.063
68 253804_at AT4G28230 unknown 0.208 0.155
69 261413_at AT1G07630 PLL5, pol-like 5 0.204 0.070
70 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.202 0.072
71 260522_x_at AT2G41730 unknown 0.201 0.225
72 262703_at AT1G16510 SAUR41, SMALL AUXIN UPREGULATED 41 0.199 -0.102
73 256832_at AT3G22880 ARLIM15, ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15, ATDMC1, ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1, DMC1, DISRUPTION OF MEIOTIC CONTROL 1 0.198 -0.212
74 251067_at AT5G01910 unknown 0.197 -0.210
75 259793_at AT1G64380 [Integrase-type DNA-binding superfamily protein] 0.195 -0.089
76 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] 0.195 -0.038
77 248691_at AT5G48310 unknown 0.195 -0.122
78 252533_at AT3G46110 [LOCATED IN: plasma membrane] 0.194 -0.213
79 248839_at AT5G46690 bHLH071, beta HLH protein 71 0.193 -0.034
80 262558_at AT1G31335 unknown 0.193 -0.110
81 267232_at AT2G44190 EDE1, ENDOSPERM DEFECTIVE 1, EMB3116, EMBRYO DEFECTIVE 3116, QWRF5, QWRF domain containing 5 0.193 0.142
82 259978_at AT1G76540 CDKB2;1, cyclin-dependent kinase B2;1 0.192 0.058
83 248413_at AT5G51600 ATMAP65-3, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, MAP65-3, MICROTUBULE-ASSOCIATED PROTEIN 65-3, PLE, PLEIADE 0.190 0.103
84 250942_at AT5G03350 [Legume lectin family protein] 0.189 0.021
85 266901_at AT2G34600 JAZ7, jasmonate-zim-domain protein 7, TIFY5B -0.784 -0.070
86 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.736 -0.020
87 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.709 0.037
88 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.645 -0.031
89 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.624 0.098
90 262211_at AT1G74930 ORA47 -0.536 -0.276
91 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 -0.535 0.078
92 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 -0.521 -0.028
93 258919_at AT3G10525 LGO, LOSS OF GIANT CELLS FROM ORGANS, SMR1, SIAMESE RELATED 1 -0.513 0.282
94 258856_at AT3G02040 AtGDPD1, GDPD1, Glycerophosphodiester phosphodiesterase 1, SRG3, senescence-related gene 3 -0.466 0.186
95 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 -0.434 0.119
96 261817_at AT1G08180 unknown -0.425 -0.050
97 251060_at AT5G01820 ATCIPK14, ATSR1, serine/threonine protein kinase 1, CIPK14, CBL-INTERACTING PROTEIN KINASE 14, PKS24, SOS2-like protein kinase 24, SnRK3.15, SNF1-RELATED PROTEIN KINASE 3.15, SR1, serine/threonine protein kinase 1 -0.397 -0.168
98 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.388 -0.222
99 258133_at AT3G24500 ATMBF1C, MBF1C, multiprotein bridging factor 1C -0.385 0.086
100 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 -0.382 0.089
101 247543_at AT5G61600 ERF104, ethylene response factor 104 -0.380 -0.024
102 245252_at AT4G17500 ATERF-1, ethylene responsive element binding factor 1, ERF-1, ethylene responsive element binding factor 1 -0.374 -0.017
103 259879_at AT1G76650 CML38, calmodulin-like 38 -0.370 0.001
104 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 -0.366 -0.035
105 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 -0.357 0.028
106 256096_at AT1G13650 unknown -0.355 0.043
107 261663_at AT1G18330 EPR1, EARLY-PHYTOCHROME-RESPONSIVE1, RVE7, REVEILLE 7 -0.352 0.028
108 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -0.343 -0.091
109 247780_at AT5G58770 AtcPT4, cPT4, cis-prenyltransferase 4 -0.343 -0.248
110 263739_at AT2G21320 BBX18, B-box domain protein 18 -0.343 0.244
111 263480_at AT2G04032 ZIP7, zinc transporter 7 precursor -0.329 0.015
112 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.326 0.010
113 253832_at AT4G27654 unknown -0.321 0.171
114 248910_at AT5G45820 CIPK20, CBL-interacting protein kinase 20, PKS18, PROTEIN KINASE 18, SnRK3.6, SNF1-RELATED PROTEIN KINASE 3.6 -0.317 0.048
115 248657_at AT5G48570 ATFKBP65, FKBP65, ROF2 -0.316 0.078
116 252193_at AT3G50060 MYB77, myb domain protein 77 -0.302 -0.088
117 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 -0.300 0.138
118 253915_at AT4G27280 [Calcium-binding EF-hand family protein] -0.299 -0.058
119 251195_at AT3G62930 [Thioredoxin superfamily protein] -0.292 -0.024
120 255284_at AT4G04610 APR, APR1, APS reductase 1, ATAPR1, PRH19, PAPS REDUCTASE HOMOLOG 19 -0.291 0.084
121 266246_at AT2G27690 CYP94C1, cytochrome P450, family 94, subfamily C, polypeptide 1 -0.291 0.136
122 259751_at AT1G71030 ATMYBL2, ARABIDOPSIS MYB-LIKE 2, MYBL2, MYB-like 2 -0.286 0.012
123 256017_at AT1G19180 AtJAZ1, JAZ1, jasmonate-zim-domain protein 1, TIFY10A -0.283 0.080
124 266278_at AT2G29300 [NAD(P)-binding Rossmann-fold superfamily protein] -0.281 -0.063
125 267010_at AT2G39250 SNZ, SCHNARCHZAPFEN -0.281 0.012
126 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 -0.274 -0.047
127 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 -0.270 -0.028
128 256159_at AT1G30135 JAZ8, jasmonate-zim-domain protein 8, TIFY5A -0.265 0.038
129 259979_at AT1G76600 unknown -0.262 0.007
130 245084_at AT2G23290 AtMYB70, myb domain protein 70, MYB70, myb domain protein 70 -0.260 0.032
131 248432_at AT5G51390 unknown -0.257 0.041
132 257673_at AT3G20370 [TRAF-like family protein] -0.248 -0.158
133 263549_at AT2G21650 ATRL2, ARABIDOPSIS RAD-LIKE 2, MEE3, MATERNAL EFFECT EMBRYO ARREST 3, RSM1, RADIALIS-LIKE SANT/MYB 1 -0.247 0.028
134 251024_at AT5G02180 [Transmembrane amino acid transporter family protein] -0.243 -0.056
135 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 -0.243 -0.078
136 265680_at AT2G32150 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.242 -0.081
137 250724_at AT5G06330 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.242 0.093
138 251509_at AT3G59010 PME35, pectin methylesterase 35, PME61, pectin methylesterase 61 -0.240 -0.005
139 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] -0.240 -0.031
140 265620_at AT2G27310 [F-box family protein] -0.239 -0.134
141 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 -0.239 0.040
142 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 -0.237 -0.265
143 246001_at AT5G20790 unknown -0.235 0.035
144 253814_at AT4G28290 unknown -0.234 -0.099
145 265732_at AT2G01300 unknown -0.231 0.030
146 263935_at AT2G35930 AtPUB23, PUB23, plant U-box 23 -0.231 -0.101
147 248353_at AT5G52320 CYP96A4, cytochrome P450, family 96, subfamily A, polypeptide 4 -0.229 0.116
148 254692_at AT4G17860 unknown -0.228 -0.252
149 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 -0.226 0.129
150 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 -0.224 -0.156
151 247452_at AT5G62430 CDF1, cycling DOF factor 1 -0.224 -0.021
152 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 -0.222 -0.093
153 260549_at AT2G43535 [Scorpion toxin-like knottin superfamily protein] -0.216 0.087
154 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 -0.216 -0.173
155 266617_at AT2G29670 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.216 -0.059
156 245749_at AT1G51090 [Heavy metal transport/detoxification superfamily protein ] -0.216 0.059
157 264211_at AT1G22770 FB, GI, GIGANTEA -0.215 -0.109
158 262366_at AT1G72890 [Disease resistance protein (TIR-NBS class)] -0.215 0.049
159 254931_at AT4G11460 CRK30, cysteine-rich RLK (RECEPTOR-like protein kinase) 30 -0.214 -0.176
160 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] -0.214 0.002
161 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 -0.213 -0.248
162 251028_at AT5G02230 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.211 -0.006
163 265051_at AT1G52100 [Mannose-binding lectin superfamily protein] -0.211 -0.025
164 266572_at AT2G23840 [HNH endonuclease] -0.210 0.018
165 260455_at AT1G72500 [LOCATED IN: plasma membrane] -0.209 0.048
166 251497_at AT3G59060 PIF5, PHYTOCHROME-INTERACTING FACTOR 5, PIL6, phytochrome interacting factor 3-like 6 -0.209 -0.012
167 255734_at AT1G25550 [myb-like transcription factor family protein] -0.206 -0.066