4.0:Information of module
efr-1 untreated
In comparison with Shoot submergence 7h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042537 benzene-containing compound metabolic pr... BP 1.627e-04
GO:0018958 phenol-containing compound metabolic pro... BP 3.093e-04
GO:0010033 response to organic substance BP 6.398e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 9.824e-05
GO:0002679 respiratory burst involved in defense re... BP 1.021e-04
GO:0045730 respiratory burst BP 1.021e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
efr-1 untreated		 Log2 signal ratio
Shoot submergence 7h
1 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 0.255 -0.633
2 262448_at AT1G49450 [Transducin/WD40 repeat-like superfamily protein] 0.173 -0.086
3 245032_at AT2G26630 [transposase IS4 family protein, contains Pfam profile: PF01609 transposase DDE domain] 0.145 -0.028
4 263549_at AT2G21650 ATRL2, ARABIDOPSIS RAD-LIKE 2, MEE3, MATERNAL EFFECT EMBRYO ARREST 3, RSM1, RADIALIS-LIKE SANT/MYB 1 0.138 -0.583
5 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.122 -0.010
6 259735_at AT1G64405 unknown 0.121 -0.162
7 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.105 0.002
8 245748_at AT1G51140 AKS1, ABA-responsive kinase substrate 1, FBH3, FLOWERING BHLH 3 0.105 -0.694
9 265249_at AT2G01940 ATIDD15, ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15, SGR5, SHOOT GRAVITROPISM 5 0.098 0.441
10 256976_at AT3G21020 [copia-like retrotransposon family, has a 5.4e-14 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] 0.098 0.023
11 262883_at AT1G64780 AMT1;2, ammonium transporter 1;2, ATAMT1;2, ammonium transporter 1;2 0.096 -1.059
12 263684_at AT1G26900 [Pentatricopeptide repeat (PPR) superfamily protein] 0.090 0.148
13 249019_at AT5G44780 MORF4, multiple organellar RNA editing factor 4 0.085 -0.187
14 248990_at AT5G45210 [Disease resistance protein (TIR-NBS-LRR class) family] 0.085 -0.061
15 256613_at AT3G29290 emb2076, embryo defective 2076 0.085 -0.250
16 264880_at AT1G61210 DWA3, DWD hypersensitive to ABA 3 0.085 -0.113
17 255481_at AT4G02460 AtPMS1, PMS1, POSTMEIOTIC SEGREGATION 1 0.084 -0.092
18 246439_at AT5G17600 [RING/U-box superfamily protein] 0.084 -0.819
19 251871_at AT3G54520 unknown 0.084 -0.052
20 249780_at AT5G24240 [Phosphatidylinositol 3- and 4-kinase ] -0.473 0.007
21 246082_at AT5G20480 EFR, EF-TU receptor -0.289 0.001
22 249042_at AT5G44350 [ethylene-responsive nuclear protein -related] -0.251 -0.131
23 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 -0.227 1.461
24 266658_at AT2G25735 unknown -0.225 0.520
25 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 -0.209 0.100
26 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 -0.162 0.273
27 245119_at AT2G41640 [Glycosyltransferase family 61 protein] -0.158 0.650
28 249915_at AT5G22870 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.151 0.199
29 256522_at AT1G66160 ATCMPG1, CMPG1, CYS, MET, PRO, and GLY protein 1 -0.151 0.398
30 247878_at AT5G57760 unknown -0.146 0.893
31 263981_at AT2G42870 HLH1, HELIX-LOOP-HELIX 1, PAR1, PHY RAPIDLY REGULATED 1 -0.136 1.027
32 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] -0.126 -0.835
33 245312_at AT4G14600 [Target SNARE coiled-coil domain protein] -0.124 0.368
34 259299_at AT3G05080 unknown -0.123 0.062
35 245788_at AT1G32120 unknown -0.118 0.118
36 261658_at AT1G50040 unknown -0.117 0.780
37 253999_at AT4G26200 ACCS7, 1-amino-cyclopropane-1-carboxylate synthase 7, ACS7, 1-amino-cyclopropane-1-carboxylate synthase 7, ATACS7 -0.116 0.428